RNA–Protein interactions for RNA: YOR018W

ROD1, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene ROD1, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROD1YOR018W ARP7Q12406 477 aa3.97□□□□□ -1.77
ROD1YOR018W VPS5Q92331 675 aa3.97□□□□□ -1.77
ROD1YOR018W TEF1P02994 458 aaKnown RBP3.96□□□□□ -1.77
ROD1YOR018W MET16P18408 261 aaPredicted RBP3.96□□□□□ -1.77
ROD1YOR018W CNS1P33313 385 aa3.96□□□□□ -1.77
ROD1YOR018W TAT2P38967 592 aa3.96□□□□□ -1.77
ROD1YOR018W TRF5P48561 642 aaKnown RBP3.96□□□□□ -1.77
ROD1YOR018W ASN2P49090 572 aaKnown RBP3.96□□□□□ -1.77
ROD1YOR018W REG1Q00816 1014 aa3.96□□□□□ -1.77
ROD1YOR018W MTD1Q02046 320 aaKnown RBP3.96□□□□□ -1.77
ROD1YOR018W VPS16Q03308 798 aa3.96□□□□□ -1.77
ROD1YOR018W MRI1Q06489 411 aaKnown RBP3.96□□□□□ -1.77
ROD1YOR018W PUF3Q07807 879 aaKnown RBP RIP-Chip data3.96□□□□□ -1.77not detected
ROD1YOR018W GCR1P07261 785 aa3.96□□□□□ -1.78
ROD1YOR018W YIH1P25637 258 aa3.96□□□□□ -1.78
ROD1YOR018W HMT1P38074 348 aa3.96□□□□□ -1.78
ROD1YOR018W MMS21P38632 267 aa3.96□□□□□ -1.78
ROD1YOR018W SAK1P38990 1142 aa3.96□□□□□ -1.78
ROD1YOR018W TMA108P40462 946 aa3.96□□□□□ -1.78
ROD1YOR018W QDR2P40474 542 aa3.96□□□□□ -1.78
ROD1YOR018W CTK3P46963 296 aaPredicted RBP3.96□□□□□ -1.78
ROD1YOR018W URB2P47108 1174 aa3.96□□□□□ -1.78
ROD1YOR018W TAH11P47112 604 aa3.96□□□□□ -1.78
ROD1YOR018W COQ6P53318 479 aa3.96□□□□□ -1.78
ROD1YOR018W MSH6Q03834 1242 aa3.96□□□□□ -1.78
ROD1YOR018W ECM22Q05958 814 aaPredicted RBP3.96□□□□□ -1.78
ROD1YOR018W THI7Q05998 598 aa3.96□□□□□ -1.78
ROD1YOR018W YLR257WQ06146 321 aaKnown RBP3.96□□□□□ -1.78
ROD1YOR018W YPQ1Q12010 308 aa3.96□□□□□ -1.78
ROD1YOR018W PIN2Q12057 282 aa3.96□□□□□ -1.78
ROD1YOR018W IZH4Q99393 312 aa3.96□□□□□ -1.78
ROD1YOR018W HEM15P16622 393 aa3.95□□□□□ -1.78
ROD1YOR018W PLC1P32383 869 aa3.95□□□□□ -1.78
ROD1YOR018W RRP1P35178 278 aaPredicted RBP3.95□□□□□ -1.78
ROD1YOR018W SHE3P38272 425 aaKnown RBP3.95□□□□□ -1.78
ROD1YOR018W YBR225WP38321 900 aa3.95□□□□□ -1.78
ROD1YOR018W PPE1P38796 400 aa3.95□□□□□ -1.78
ROD1YOR018W LYS9P38999 446 aa3.95□□□□□ -1.78
ROD1YOR018W RPS26AP39938 119 aaKnown RBP3.95□□□□□ -1.78
ROD1YOR018W RPS26BP39939 119 aaKnown RBP3.95□□□□□ -1.78
ROD1YOR018W NTA1P40354 457 aa3.95□□□□□ -1.78
ROD1YOR018W ZIP2P53061 704 aa3.95□□□□□ -1.78
ROD1YOR018W MET13P53128 600 aa3.95□□□□□ -1.78
ROD1YOR018W CPR6P53691 371 aaKnown RBP3.95□□□□□ -1.78
ROD1YOR018W UBX4P54730 416 aa3.95□□□□□ -1.78
ROD1YOR018W SLU7Q02775 382 aaKnown RBP3.95□□□□□ -1.78
ROD1YOR018W BUD22Q04347 519 aaKnown RBP3.95□□□□□ -1.78
ROD1YOR018W AI5_ALPHAQ9ZZX1 630 aa3.95□□□□□ -1.78
ROD1YOR018W PMS1P14242 873 aa3.95□□□□□ -1.78
ROD1YOR018W RAD27P26793 382 aa3.95□□□□□ -1.78
ROD1YOR018W SPP381P38282 291 aaPredicted RBP3.95□□□□□ -1.78
ROD1YOR018W ERP2P39704 215 aa3.95□□□□□ -1.78
ROD1YOR018W SNG1P46950 547 aa3.95□□□□□ -1.78
ROD1YOR018W ADA2Q02336 434 aa3.95□□□□□ -1.78
ROD1YOR018W PIR3Q03180 325 aa3.95□□□□□ -1.78
ROD1YOR018W SXM1Q04175 944 aaKnown RBP3.95□□□□□ -1.78
ROD1YOR018W JIP5Q06214 492 aaPredicted RBP3.95□□□□□ -1.78
ROD1YOR018W NDJ1Q12366 352 aa3.95□□□□□ -1.78
ROD1YOR018W LPX1Q12405 387 aaKnown RBP3.95□□□□□ -1.78
ROD1YOR018W COX5AP00424 153 aa3.94□□□□□ -1.78
ROD1YOR018W YMR085WP0CF18 432 aa3.94□□□□□ -1.78
ROD1YOR018W PEP5P12868 1029 aa3.94□□□□□ -1.78
ROD1YOR018W POL3P15436 1097 aa3.94□□□□□ -1.78
ROD1YOR018W GID7P25569 745 aa3.94□□□□□ -1.78
ROD1YOR018W PGS1P25578 521 aa3.94□□□□□ -1.78
ROD1YOR018W MET22P32179 357 aa3.94□□□□□ -1.78
ROD1YOR018W OLA1P38219 394 aaKnown RBP3.94□□□□□ -1.78
ROD1YOR018W FSH1P38777 243 aaKnown RBP3.94□□□□□ -1.78
ROD1YOR018W MEF2P39677 819 aa3.94□□□□□ -1.78
ROD1YOR018W ARG2P40360 574 aa3.94□□□□□ -1.78
ROD1YOR018W SAP185P40856 1058 aa3.94□□□□□ -1.78
ROD1YOR018W AAD14P42884 376 aa3.94□□□□□ -1.78
ROD1YOR018W RSC8P43609 557 aaKnown RBP3.94□□□□□ -1.78
ROD1YOR018W RPS10BP46784 105 aaKnown RBP3.94□□□□□ -1.78
ROD1YOR018W YJR079WP47126 109 aa3.94□□□□□ -1.78
ROD1YOR018W GND2P53319 492 aa3.94□□□□□ -1.78
ROD1YOR018W CEG1Q01159 459 aaPredicted RBP3.94□□□□□ -1.78
ROD1YOR018W SND1Q04007 877 aa3.94□□□□□ -1.78
ROD1YOR018W BSC2Q05611 235 aa3.94□□□□□ -1.78
ROD1YOR018W RPS10AQ08745 105 aaPredicted RBP3.94□□□□□ -1.78
ROD1YOR018W FAP7Q12055 197 aaPredicted RBP3.94□□□□□ -1.78
ROD1YOR018W CCP1P00431 361 aa3.94□□□□□ -1.78
ROD1YOR018W RAD16P31244 790 aa3.94□□□□□ -1.78
ROD1YOR018W MUD2P36084 527 aaKnown RBP3.94□□□□□ -1.78
ROD1YOR018W YKR051WP36142 418 aa3.94□□□□□ -1.78
ROD1YOR018W POP4P38336 279 aa3.94□□□□□ -1.78
ROD1YOR018W STB5P38699 743 aa3.94□□□□□ -1.78
ROD1YOR018W PMC1P38929 1173 aaPredicted RBP3.94□□□□□ -1.78
ROD1YOR018W EDC3P39998 551 aaKnown RBP3.94□□□□□ -1.78
ROD1YOR018W MGS1P40151 587 aa3.94□□□□□ -1.78
ROD1YOR018W YNL034WP53963 612 aa3.94□□□□□ -1.78
ROD1YOR018W YNL018CP53976 612 aa3.94□□□□□ -1.78
ROD1YOR018W ADE13Q05911 482 aaKnown RBP3.94□□□□□ -1.78
ROD1YOR018W YCS4Q06156 1176 aa3.94□□□□□ -1.78
ROD1YOR018W PIG1Q06216 648 aa3.94□□□□□ -1.78
ROD1YOR018W SLD7Q08457 257 aa3.94□□□□□ -1.78
ROD1YOR018W MRN1Q08925 612 aaKnown RBP RIP-Chip data3.94□□□□□ -1.78not detected
ROD1YOR018W OCA6Q12454 224 aa3.94□□□□□ -1.78
ROD1YOR018W ERG20P08524 352 aaKnown RBP3.93□□□□□ -1.78
ROD1YOR018W YML002WP0CF17 737 aa3.93□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms