RNA–Protein interactions for RNA: YNL242W

ATG2, Transcript of Peripheral membrane protein required for autophagic vesicle formation, yeast

Gene ATG2, Length 4,779 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG2	YNL242W	NNF1	P47149	201 aa		4.07	□□□□□ -1.76
ATG2	YNL242W	YGR111W	P53265	400 aa		4.07	□□□□□ -1.76
ATG2	YNL242W	YNL134C	P53912	376 aa	Known RBP	4.07	□□□□□ -1.76
ATG2	YNL242W	DML1	Q03652	475 aa		4.07	□□□□□ -1.76
ATG2	YNL242W	YDL057W	Q07379	328 aa		4.07	□□□□□ -1.76
ATG2	YNL242W	THI20	Q08224	551 aa		4.07	□□□□□ -1.76
ATG2	YNL242W	YDR056C	Q12025	205 aa		4.07	□□□□□ -1.76
ATG2	YNL242W	ULA1	Q12059	462 aa		4.07	□□□□□ -1.76
ATG2	YNL242W	LSO2	Q3E772	92 aa	Known RBP	4.07	□□□□□ -1.76
ATG2	YNL242W	RED1	P14291	827 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	CKA2	P19454	339 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	RPB4	P20433	221 aa	Predicted RBP	4.06	□□□□□ -1.76
ATG2	YNL242W	TSR4	P25040	408 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	DAL2	P25335	343 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	NUP2	P32499	720 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	SPR1	P32603	445 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	VPS51	P36116	164 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	YJL070C	P40361	888 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	MAD3	P47074	515 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	CLA4	P48562	842 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	YGR054W	P53235	642 aa	Known RBP	4.06	□□□□□ -1.76
ATG2	YNL242W	FOL1	P53848	824 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	SGO1	Q08490	590 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	PSY3	Q12318	242 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	YBR298C-A	Q8TGK4	73 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	TY1B-NL2	Q99337	1749 aa	Known RBP	4.06	□□□□□ -1.76
ATG2	YNL242W	ILS1	P09436	1072 aa	Known RBP	4.06	□□□□□ -1.76
ATG2	YNL242W	PMS1	P14242	873 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	SDH2	P21801	266 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	CRM1	P30822	1084 aa	Known RBP	4.06	□□□□□ -1.76
ATG2	YNL242W	FUN30	P31380	1131 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	SAC1	P32368	623 aa	Known RBP	4.06	□□□□□ -1.76
ATG2	YNL242W	VMA8	P32610	256 aa	Known RBP	4.06	□□□□□ -1.76
ATG2	YNL242W	ARC19	P33204	171 aa	Known RBP	4.06	□□□□□ -1.76
ATG2	YNL242W	GLG1	P36143	616 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	MAK5	P38112	773 aa	Predicted RBP	4.06	□□□□□ -1.76
ATG2	YNL242W	TSC10	P38342	320 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	YHR219W	P38900	624 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	PRK1	P40494	810 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	YRB2	P40517	327 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	DBP6	P53734	629 aa	Known RBP	4.06	□□□□□ -1.76
ATG2	YNL242W	ESBP6	P53918	673 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	TIM8	P57744	87 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	SLD5	Q03406	294 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	BUL2	Q03758	920 aa	Known RBP	4.06	□□□□□ -1.76
ATG2	YNL242W	ATG16	Q03818	150 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	RGA2	Q06407	1009 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	ESC8	Q08119	714 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	YPL277C	Q08989	487 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	SNF4	P12904	322 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	KIN1	P13185	1064 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	MSD1	P15179	658 aa	Known RBP	4.06	□□□□□ -1.76
ATG2	YNL242W	KIN3	P22209	435 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	UGP1	P32861	499 aa	Known RBP	4.06	□□□□□ -1.76
ATG2	YNL242W	KEL1	P38853	1164 aa	Known RBP	4.06	□□□□□ -1.76
ATG2	YNL242W	AST2	P39945	430 aa	Known RBP	4.06	□□□□□ -1.76
ATG2	YNL242W	MRK1	P50873	501 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	ZRG17	P53735	605 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	FDC1	Q03034	503 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	FMN1	Q03778	218 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	GLO2	Q05584	274 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	MRX10	Q05648	414 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	DTD1	Q07648	150 aa	Known RBP	4.06	□□□□□ -1.76
ATG2	YNL242W	TRE1	Q08919	783 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	MET17	P06106	444 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	MAE1	P36013	669 aa	Known RBP	4.06	□□□□□ -1.76
ATG2	YNL242W	NTR2	P36118	322 aa	Predicted RBP	4.06	□□□□□ -1.76
ATG2	YNL242W	PHB1	P40961	287 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	MSS2	P40990	351 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	YFL040W	P43562	540 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	GPI17	Q04080	534 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	SUE1	Q06524	206 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	CDC73	Q06697	393 aa		4.06	□□□□□ -1.76
ATG2	YNL242W	GCD1	P09032	578 aa	Predicted RBP	4.05	□□□□□ -1.76
ATG2	YNL242W	AFT1	P22149	690 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	URA7	P28274	579 aa	Known RBP	4.05	□□□□□ -1.76
ATG2	YNL242W	PGM2	P37012	569 aa	Known RBP	4.05	□□□□□ -1.76
ATG2	YNL242W	MRX3	P38172	270 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
ATG2	YNL242W	DYS1	P38791	387 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	PEP8	P40335	379 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	IRC5	P43610	853 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	ALY2	P47029	1046 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	IML2	P47031	731 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	YJL055W	P47044	245 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	PMT3	P47190	753 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	IRC4	Q03036	179 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	LRE1	P25579	583 aa	Known RBP	4.05	□□□□□ -1.76
ATG2	YNL242W	MEI4	P29467	408 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	GEF1	P37020	779 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	GRS1	P38088	690 aa	Known RBP	4.05	□□□□□ -1.76
ATG2	YNL242W	SEC31	P38968	1273 aa	Known RBP	4.05	□□□□□ -1.76
ATG2	YNL242W	INP51	P40559	946 aa	Known RBP	4.05	□□□□□ -1.76
ATG2	YNL242W	IPI3	P53877	555 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	RSM28	Q03430	361 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	NNT1	Q05874	261 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	YCS4	Q06156	1176 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	PGC1	Q08959	321 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	APC9	Q12107	265 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	HRT3	Q12347	344 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 18 ms