RNA–Protein interactions for RNA: YLR438C-A

LSM3, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM3, Length 270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM3YLR438C-A YMR206WQ03695 313 aa13□□□□□ -0.33
LSM3YLR438C-A IMA2Q08295 589 aa13□□□□□ -0.33
LSM3YLR438C-A IMG2P25642 146 aaPredicted RBP12.99□□□□□ -0.33
LSM3YLR438C-A NDI1P32340 513 aa12.99□□□□□ -0.33
LSM3YLR438C-A UTR2P32623 467 aa12.99□□□□□ -0.33
LSM3YLR438C-A YME1P32795 747 aa12.99□□□□□ -0.33
LSM3YLR438C-A ASN2P49090 572 aaKnown RBP12.99□□□□□ -0.33
LSM3YLR438C-A YNR063WP53749 607 aa12.99□□□□□ -0.33
LSM3YLR438C-A SHR3Q02774 210 aa12.99□□□□□ -0.33
LSM3YLR438C-A STE23Q06010 1027 aa12.99□□□□□ -0.33
LSM3YLR438C-A FRA1Q07825 749 aa12.99□□□□□ -0.33
LSM3YLR438C-A PEX15Q08215 383 aa12.99□□□□□ -0.33
LSM3YLR438C-A PGC1Q08959 321 aa12.99□□□□□ -0.33
LSM3YLR438C-A ARF2P19146 181 aaKnown RBP12.98□□□□□ -0.33
LSM3YLR438C-A MRPL25P23369 157 aa12.98□□□□□ -0.33
LSM3YLR438C-A SGF29P25554 259 aa12.98□□□□□ -0.33
LSM3YLR438C-A URA7P28274 579 aaKnown RBP12.98□□□□□ -0.33
LSM3YLR438C-A TPS2P31688 896 aaKnown RBP12.98□□□□□ -0.33
LSM3YLR438C-A MUD2P36084 527 aaKnown RBP12.98□□□□□ -0.33
LSM3YLR438C-A YHL041WP38730 149 aa12.98□□□□□ -0.33
LSM3YLR438C-A RAD26P40352 1085 aa12.98□□□□□ -0.33
LSM3YLR438C-A IMP4P53941 290 aaKnown RBP12.98□□□□□ -0.33
LSM3YLR438C-A ARP9Q05123 467 aa12.98□□□□□ -0.33
LSM3YLR438C-A RAD59Q12223 238 aa12.98□□□□□ -0.33
LSM3YLR438C-A LDB17Q12342 491 aa12.98□□□□□ -0.33
LSM3YLR438C-A ERR1P0CX10 437 aa12.97□□□□□ -0.33
LSM3YLR438C-A ERR2P0CX11 437 aa12.97□□□□□ -0.33
LSM3YLR438C-A KAR4P25583 335 aa12.97□□□□□ -0.33
LSM3YLR438C-A CCT2P39076 527 aaKnown RBP12.97□□□□□ -0.33
LSM3YLR438C-A ERR3P42222 437 aa12.97□□□□□ -0.33
LSM3YLR438C-A SAE2P46946 345 aa12.97□□□□□ -0.33
LSM3YLR438C-A TAH11P47112 604 aa12.97□□□□□ -0.33
LSM3YLR438C-A CDC14Q00684 551 aa12.97□□□□□ -0.33
LSM3YLR438C-A RNT1Q02555 471 aa12.97□□□□□ -0.33
LSM3YLR438C-A TMN2Q04562 672 aa12.97□□□□□ -0.33
LSM3YLR438C-A RUD3Q12234 484 aaKnown RBP12.97□□□□□ -0.33
LSM3YLR438C-A MIH1P23748 554 aa12.96□□□□□ -0.33
LSM3YLR438C-A PPZ1P26570 692 aa12.96□□□□□ -0.33
LSM3YLR438C-A HEM12P32347 362 aaPredicted RBP12.96□□□□□ -0.33
LSM3YLR438C-A KAR9P32526 644 aa12.96□□□□□ -0.33
LSM3YLR438C-A TGL4P36165 910 aa12.96□□□□□ -0.33
LSM3YLR438C-A MED6P38782 295 aa12.96□□□□□ -0.33
LSM3YLR438C-A SAP1P39955 897 aaKnown RBP12.96□□□□□ -0.33
LSM3YLR438C-A HEM14P40012 539 aa12.96□□□□□ -0.33
LSM3YLR438C-A KTR7P40504 517 aa12.96□□□□□ -0.33
LSM3YLR438C-A CHS6P40955 746 aa12.96□□□□□ -0.33
LSM3YLR438C-A RRN7P40992 514 aa12.96□□□□□ -0.33
LSM3YLR438C-A GYP8P43570 497 aa12.96□□□□□ -0.33
LSM3YLR438C-A SFB2P53953 876 aa12.96□□□□□ -0.33
LSM3YLR438C-A RSC4Q02206 625 aa12.96□□□□□ -0.33
LSM3YLR438C-A YMR160WQ03823 816 aa12.96□□□□□ -0.33
LSM3YLR438C-A LDB18Q07887 179 aa12.96□□□□□ -0.33
LSM3YLR438C-A YKL068W-AQ3E826 78 aa12.96□□□□□ -0.33
LSM3YLR438C-A YMR084WA2P2R3 262 aa12.95□□□□□ -0.34
LSM3YLR438C-A COX5AP00424 153 aa12.95□□□□□ -0.34
LSM3YLR438C-A RPB2P08518 1224 aaKnown RBP12.95□□□□□ -0.34
LSM3YLR438C-A PYC1P11154 1178 aaKnown RBP12.95□□□□□ -0.34
LSM3YLR438C-A SST2P11972 698 aaKnown RBP12.95□□□□□ -0.34
LSM3YLR438C-A KEX2P13134 814 aa12.95□□□□□ -0.34
LSM3YLR438C-A HEM15P16622 393 aa12.95□□□□□ -0.34
LSM3YLR438C-A TSR4P25040 408 aa12.95□□□□□ -0.34
LSM3YLR438C-A PMI40P29952 429 aaKnown RBP12.95□□□□□ -0.34
LSM3YLR438C-A EXO1P39875 702 aa12.95□□□□□ -0.34
LSM3YLR438C-A ZIP2P53061 704 aa12.95□□□□□ -0.34
LSM3YLR438C-A SIW14P53965 281 aa12.95□□□□□ -0.34
LSM3YLR438C-A KTR5P53966 522 aaPredicted RBP12.95□□□□□ -0.34
LSM3YLR438C-A YHM2Q04013 314 aa12.95□□□□□ -0.34
LSM3YLR438C-A NDD1Q08887 554 aa12.95□□□□□ -0.34
LSM3YLR438C-A HSF1P10961 833 aa12.94□□□□□ -0.34
LSM3YLR438C-A HSP60P19882 572 aaKnown RBP12.94□□□□□ -0.34
LSM3YLR438C-A KIN3P22209 435 aa12.94□□□□□ -0.34
LSM3YLR438C-A PUP3P25451 205 aaKnown RBP12.94□□□□□ -0.34
LSM3YLR438C-A URA10P30402 227 aa12.94□□□□□ -0.34
LSM3YLR438C-A SMX2P40204 77 aaKnown RBP12.94□□□□□ -0.34
LSM3YLR438C-A ELO3P40319 345 aa12.94□□□□□ -0.34
LSM3YLR438C-A ALA1P40825 983 aaKnown RBP12.94□□□□□ -0.34
LSM3YLR438C-A TIM13P53299 105 aa12.94□□□□□ -0.34
LSM3YLR438C-A YTP1P53584 459 aa12.94□□□□□ -0.34
LSM3YLR438C-A MET14Q02196 202 aa12.94□□□□□ -0.34
LSM3YLR438C-A ADE13Q05911 482 aaKnown RBP12.94□□□□□ -0.34
LSM3YLR438C-A YSH1Q06224 779 aaPredicted RBP12.94□□□□□ -0.34
LSM3YLR438C-A ENO1P00924 437 aaKnown RBP12.93□□□□□ -0.34
LSM3YLR438C-A ILS1P09436 1072 aaKnown RBP12.93□□□□□ -0.34
LSM3YLR438C-A GID7P25569 745 aa12.93□□□□□ -0.34
LSM3YLR438C-A APM3P38153 483 aa12.93□□□□□ -0.34
LSM3YLR438C-A DOT6P40059 670 aaKnown RBP12.93□□□□□ -0.34
LSM3YLR438C-A DPH1P40487 425 aaKnown RBP12.93□□□□□ -0.34
LSM3YLR438C-A AMA1P50082 593 aa12.93□□□□□ -0.34
LSM3YLR438C-A YNR065CP53751 1116 aa12.93□□□□□ -0.34
LSM3YLR438C-A MAP1Q01662 387 aaKnown RBP RIP-Chip data12.93□□□□□ -0.34not detected
LSM3YLR438C-A OCA6Q12454 224 aa12.93□□□□□ -0.34
LSM3YLR438C-A ARG4P04076 463 aaPredicted RBP12.92□□□□□ -0.34
LSM3YLR438C-A REV1P12689 985 aa12.92□□□□□ -0.34
LSM3YLR438C-A DAL81P21657 970 aa12.92□□□□□ -0.34
LSM3YLR438C-A YCL068CP25593 260 aa12.92□□□□□ -0.34
LSM3YLR438C-A CDC20P26309 610 aa12.92□□□□□ -0.34
LSM3YLR438C-A ECM32P32644 1121 aaKnown RBP12.92□□□□□ -0.34
LSM3YLR438C-A TYE7P33122 291 aaPredicted RBP12.92□□□□□ -0.34
LSM3YLR438C-A YKL097CP34245 136 aa12.92□□□□□ -0.34
LSM3YLR438C-A TFA2P36145 328 aa12.92□□□□□ -0.34
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms