RNA–Protein interactions for RNA: YLR208W

SEC13, Transcript of Structural component of 3 distinct complexes, yeastyeast

Gene SEC13, Length 894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC13YLR208W NPR3P38742 1146 aa5.72□□□□□ -1.49
SEC13YLR208W PIC2P40035 300 aa5.72□□□□□ -1.49
SEC13YLR208W YPS6P40583 537 aa5.72□□□□□ -1.49
SEC13YLR208W RET2P43621 546 aa5.72□□□□□ -1.49
SEC13YLR208W NIT2P47016 307 aa5.72□□□□□ -1.49
SEC13YLR208W NOP13P53883 403 aaKnown RBP RIP-Chip data5.72□□□□□ -1.49not detected
SEC13YLR208W RSC58Q07979 502 aa5.72□□□□□ -1.49
SEC13YLR208W GPM2Q12008 311 aa5.72□□□□□ -1.49
SEC13YLR208W TAF10Q12030 206 aa5.72□□□□□ -1.49
SEC13YLR208W TIP41Q12199 356 aa5.72□□□□□ -1.49
SEC13YLR208W DBP10Q12389 995 aaKnown RBP5.72□□□□□ -1.49
SEC13YLR208W FLP1P03870 423 aa5.71□□□□□ -1.5
SEC13YLR208W MSF1P08425 469 aa5.71□□□□□ -1.5
SEC13YLR208W LYP1P32487 611 aa5.71□□□□□ -1.5
SEC13YLR208W ABD1P32783 436 aaPredicted RBP5.71□□□□□ -1.5
SEC13YLR208W BEM3P32873 1128 aa5.71□□□□□ -1.5
SEC13YLR208W RRF1P38771 230 aa5.71□□□□□ -1.5
SEC13YLR208W PPE1P38796 400 aa5.71□□□□□ -1.5
SEC13YLR208W LRP1P38801 184 aaKnown RBP5.71□□□□□ -1.5
SEC13YLR208W OSW5P40219 148 aa5.71□□□□□ -1.5
SEC13YLR208W YJR098CP47139 656 aa5.71□□□□□ -1.5
SEC13YLR208W YKE2P52553 114 aa5.71□□□□□ -1.5
SEC13YLR208W CUE3P53137 624 aaKnown RBP5.71□□□□□ -1.5
SEC13YLR208W NPY1P53164 384 aa5.71□□□□□ -1.5
SEC13YLR208W YNR065CP53751 1116 aa5.71□□□□□ -1.5
SEC13YLR208W TIM11P81449 96 aaPredicted RBP5.71□□□□□ -1.5
SEC13YLR208W GTR1Q00582 310 aa5.71□□□□□ -1.5
SEC13YLR208W UBP2Q01476 1272 aa5.71□□□□□ -1.5
SEC13YLR208W NPL3Q01560 414 aaKnown RBP RIP-Chip data5.71□□□□□ -1.5not detected
SEC13YLR208W YLR407WQ06070 228 aa5.71□□□□□ -1.5
SEC13YLR208W YTM1Q12024 460 aaPredicted RBP5.71□□□□□ -1.5
SEC13YLR208W RTK1Q12100 620 aaPredicted RBP5.71□□□□□ -1.5
SEC13YLR208W GET3Q12154 354 aaKnown RBP5.71□□□□□ -1.5
SEC13YLR208W SWI5P08153 709 aa5.7□□□□□ -1.5
SEC13YLR208W SPO16P17122 198 aa5.7□□□□□ -1.5
SEC13YLR208W CBP3P21560 335 aa5.7□□□□□ -1.5
SEC13YLR208W PET309P32522 965 aaPredicted RBP5.7□□□□□ -1.5
SEC13YLR208W PET10P36139 283 aa5.7□□□□□ -1.5
SEC13YLR208W SEA4P38164 1038 aa5.7□□□□□ -1.5
SEC13YLR208W YBR225WP38321 900 aa5.7□□□□□ -1.5
SEC13YLR208W UME6P39001 836 aa5.7□□□□□ -1.5
SEC13YLR208W EMP65P40085 556 aa5.7□□□□□ -1.5
SEC13YLR208W VEL1P53058 206 aa5.7□□□□□ -1.5
SEC13YLR208W RBG2P53295 368 aaKnown RBP5.7□□□□□ -1.5
SEC13YLR208W ECM22Q05958 814 aaPredicted RBP5.7□□□□□ -1.5
SEC13YLR208W CUR1Q06469 252 aa5.7□□□□□ -1.5
SEC13YLR208W YCG1Q06680 1035 aa5.7□□□□□ -1.5
SEC13YLR208W ADY3Q07732 790 aa5.7□□□□□ -1.5
SEC13YLR208W APC5Q08683 685 aa5.7□□□□□ -1.5
SEC13YLR208W YOR387CQ08910 206 aa5.7□□□□□ -1.5
SEC13YLR208W DCS2Q12123 353 aa5.7□□□□□ -1.5
SEC13YLR208W HSH49Q99181 213 aaPredicted RBP5.7□□□□□ -1.5
SEC13YLR208W CHS1P08004 1131 aa5.69□□□□□ -1.5
SEC13YLR208W VBA3P25594 458 aa5.69□□□□□ -1.5
SEC13YLR208W CMK1P27466 446 aaKnown RBP5.69□□□□□ -1.5
SEC13YLR208W GAR1P28007 205 aaKnown RBP5.69□□□□□ -1.5
SEC13YLR208W FUN30P31380 1131 aa5.69□□□□□ -1.5
SEC13YLR208W CCR4P31384 837 aaKnown RBP5.69□□□□□ -1.5
SEC13YLR208W DAL1P32375 460 aa5.69□□□□□ -1.5
SEC13YLR208W PRP19P32523 503 aaKnown RBP5.69□□□□□ -1.5
SEC13YLR208W WBP1P33767 430 aaKnown RBP5.69□□□□□ -1.5
SEC13YLR208W IRS4P36115 615 aaKnown RBP5.69□□□□□ -1.5
SEC13YLR208W GLY1P37303 387 aaKnown RBP5.69□□□□□ -1.5
SEC13YLR208W PSY4P38193 441 aa5.69□□□□□ -1.5
SEC13YLR208W AVT2P39981 480 aa5.69□□□□□ -1.5
SEC13YLR208W RAD26P40352 1085 aa5.69□□□□□ -1.5
SEC13YLR208W YGR266WP53326 701 aa5.69□□□□□ -1.5
SEC13YLR208W ARP5P53946 755 aa5.69□□□□□ -1.5
SEC13YLR208W TOF2Q02208 771 aa5.69□□□□□ -1.5
SEC13YLR208W GSF2Q04697 403 aaKnown RBP5.69□□□□□ -1.5
SEC13YLR208W YOR296WQ08748 1289 aa5.69□□□□□ -1.5
SEC13YLR208W PTC5Q12511 572 aa5.69□□□□□ -1.5
SEC13YLR208W RMP1Q12530 201 aa5.69□□□□□ -1.5
SEC13YLR208W STF1P01098 86 aa5.68□□□□□ -1.5
SEC13YLR208W MSS18P08593 268 aa5.68□□□□□ -1.5
SEC13YLR208W ALG1P16661 449 aa5.68□□□□□ -1.5
SEC13YLR208W SNF5P18480 905 aa5.68□□□□□ -1.5
SEC13YLR208W CKA2P19454 339 aa5.68□□□□□ -1.5
SEC13YLR208W ISY1P21374 235 aaPredicted RBP5.68□□□□□ -1.5
SEC13YLR208W GBP2P25555 427 aaKnown RBP RIP-Chip data5.68□□□□□ -1.5not detected
SEC13YLR208W SPC29P33419 253 aa5.68□□□□□ -1.5
SEC13YLR208W SCD5P34758 872 aa5.68□□□□□ -1.5
SEC13YLR208W UBP13P38187 747 aa5.68□□□□□ -1.5
SEC13YLR208W SHE3P38272 425 aaKnown RBP5.68□□□□□ -1.5
SEC13YLR208W UBS1P38290 277 aa5.68□□□□□ -1.5
SEC13YLR208W ATG12P38316 186 aa5.68□□□□□ -1.5
SEC13YLR208W FHL1P39521 936 aa5.68□□□□□ -1.5
SEC13YLR208W NOP16P40007 231 aaKnown RBP5.68□□□□□ -1.5
SEC13YLR208W HEM14P40012 539 aa5.68□□□□□ -1.5
SEC13YLR208W NTA1P40354 457 aa5.68□□□□□ -1.5
SEC13YLR208W GNP1P48813 663 aa5.68□□□□□ -1.5
SEC13YLR208W HSH155P49955 971 aaKnown RBP5.68□□□□□ -1.5
SEC13YLR208W YGL036WP53185 909 aaPredicted RBP5.68□□□□□ -1.5
SEC13YLR208W SCW11P53189 542 aa5.68□□□□□ -1.5
SEC13YLR208W MRPL19P53875 158 aa5.68□□□□□ -1.5
SEC13YLR208W YMR187CQ03236 431 aa5.68□□□□□ -1.5
SEC13YLR208W YMR111CQ04461 462 aaPredicted RBP5.68□□□□□ -1.5
SEC13YLR208W BLS1Q06071 122 aa5.68□□□□□ -1.5
SEC13YLR208W RSC2Q06488 889 aa5.68□□□□□ -1.5
SEC13YLR208W TSR1Q07381 788 aaKnown RBP5.68□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms