RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeastyeast

Gene SMD3, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD3YLR147C RAD26P40352 1085 aa4.54□□□□□ -1.68
SMD3YLR147C RSC9Q03124 581 aa4.54□□□□□ -1.68
SMD3YLR147C CRF1Q04930 467 aa4.54□□□□□ -1.68
SMD3YLR147C YDL242WQ07746 117 aa4.54□□□□□ -1.68
SMD3YLR147C PRS5Q12265 496 aaKnown RBP4.54□□□□□ -1.68
SMD3YLR147C YOL114CQ12322 202 aa4.54□□□□□ -1.68
SMD3YLR147C CTT1P06115 562 aa4.53□□□□□ -1.68
SMD3YLR147C RRP8P38961 392 aaKnown RBP4.53□□□□□ -1.68
SMD3YLR147C SAP1P39955 897 aaKnown RBP4.53□□□□□ -1.68
SMD3YLR147C COG2P53271 262 aa4.53□□□□□ -1.68
SMD3YLR147C MET14Q02196 202 aa4.53□□□□□ -1.68
SMD3YLR147C VPS64Q03944 604 aa4.53□□□□□ -1.68
SMD3YLR147C AIM6Q07716 390 aa4.53□□□□□ -1.68
SMD3YLR147C ICT1Q12385 394 aa4.53□□□□□ -1.68
SMD3YLR147C PNO1Q99216 274 aaKnown RBP4.53□□□□□ -1.68
SMD3YLR147C GAL1P04385 528 aa4.52□□□□□ -1.69
SMD3YLR147C KES1P35844 434 aaKnown RBP4.52□□□□□ -1.69
SMD3YLR147C IMD2P38697 523 aaKnown RBP4.52□□□□□ -1.69
SMD3YLR147C STT3P39007 718 aaKnown RBP4.52□□□□□ -1.69
SMD3YLR147C SNM1P40993 198 aa4.52□□□□□ -1.69
SMD3YLR147C PSA1P41940 361 aaKnown RBP4.52□□□□□ -1.69
SMD3YLR147C IMD3P50095 523 aaKnown RBP4.52□□□□□ -1.69
SMD3YLR147C ESF2P53743 316 aaKnown RBP4.52□□□□□ -1.69
SMD3YLR147C YML053CQ04978 212 aa4.52□□□□□ -1.69
SMD3YLR147C RAD34Q06665 692 aa4.52□□□□□ -1.69
SMD3YLR147C BRE1Q07457 700 aaKnown RBP4.52□□□□□ -1.69
SMD3YLR147C ICL2Q12031 575 aa4.52□□□□□ -1.69
SMD3YLR147C YER175W-AQ8TGU4 54 aa4.52□□□□□ -1.69
SMD3YLR147C RTC1Q08281 1341 aa4.51□□□□□ -1.69
SMD3YLR147C TMT1P32643 299 aa4.51□□□□□ -1.69
SMD3YLR147C ECM32P32644 1121 aaKnown RBP4.51□□□□□ -1.69
SMD3YLR147C GRX7P38068 203 aa4.51□□□□□ -1.69
SMD3YLR147C LNP1P38878 278 aa4.51□□□□□ -1.69
SMD3YLR147C QRI7P43122 407 aa4.51□□□□□ -1.69
SMD3YLR147C SNO3P43544 222 aa4.51□□□□□ -1.69
SMD3YLR147C GLO1P50107 326 aa4.51□□□□□ -1.69
SMD3YLR147C TEP1P53916 434 aa4.51□□□□□ -1.69
SMD3YLR147C IDP3P53982 420 aaKnown RBP4.51□□□□□ -1.69
SMD3YLR147C PLM2Q04383 521 aa4.51□□□□□ -1.69
SMD3YLR147C TPO3Q06451 622 aa4.51□□□□□ -1.69
SMD3YLR147C CET1O13297 549 aaPredicted RBP4.5□□□□□ -1.69
SMD3YLR147C SES1P07284 462 aaKnown RBP4.5□□□□□ -1.69
SMD3YLR147C SIR1P21691 654 aa4.5□□□□□ -1.69
SMD3YLR147C URE2P23202 354 aaKnown RBP4.5□□□□□ -1.69
SMD3YLR147C YKL133CP36066 463 aa4.5□□□□□ -1.69
SMD3YLR147C CIR1P42940 261 aa4.5□□□□□ -1.69
SMD3YLR147C MOT3P54785 490 aaKnown RBP4.5□□□□□ -1.69
SMD3YLR147C ERG13P54839 491 aaKnown RBP4.5□□□□□ -1.69
SMD3YLR147C STP1Q00947 519 aa4.5□□□□□ -1.69
SMD3YLR147C MLC2Q06580 163 aa4.5□□□□□ -1.69
SMD3YLR147C BI2P03873 423 aa4.49□□□□□ -1.69
SMD3YLR147C MSS18P08593 268 aa4.49□□□□□ -1.69
SMD3YLR147C FTH1P38310 465 aa4.49□□□□□ -1.69
SMD3YLR147C HIS6P40545 261 aa4.49□□□□□ -1.69
SMD3YLR147C YPL071CQ02864 156 aa4.49□□□□□ -1.69
SMD3YLR147C EIS1Q05050 843 aaKnown RBP4.49□□□□□ -1.69
SMD3YLR147C YBR255C-AQ3E776 120 aa4.49□□□□□ -1.69
SMD3YLR147C YMR085WP0CF18 432 aa4.48□□□□□ -1.69
SMD3YLR147C ERC1P38767 581 aa4.48□□□□□ -1.69
SMD3YLR147C CIN1P40987 1014 aa4.48□□□□□ -1.69
SMD3YLR147C GAT1P43574 510 aa4.48□□□□□ -1.69
SMD3YLR147C LYS21Q12122 440 aaKnown RBP4.48□□□□□ -1.69
SMD3YLR147C PTP2P29461 750 aa4.47□□□□□ -1.69
SMD3YLR147C VBA2P38358 474 aaKnown RBP4.47□□□□□ -1.69
SMD3YLR147C IRC7P43623 340 aa4.47□□□□□ -1.69
SMD3YLR147C YNL058CP53947 316 aa4.47□□□□□ -1.69
SMD3YLR147C YAP7Q08182 245 aa4.47□□□□□ -1.69
SMD3YLR147C RGT2Q12300 763 aa4.47□□□□□ -1.69
SMD3YLR147C ATP4P05626 244 aa4.46□□□□□ -1.7
SMD3YLR147C SWI4P25302 1093 aaKnown RBP4.46□□□□□ -1.7
SMD3YLR147C APM3P38153 483 aa4.46□□□□□ -1.7
SMD3YLR147C SPC72P39723 622 aa4.46□□□□□ -1.7
SMD3YLR147C ERV46P39727 415 aa4.46□□□□□ -1.7
SMD3YLR147C UBP7P40453 1071 aa4.46□□□□□ -1.7
SMD3YLR147C CAB2P40506 365 aa4.46□□□□□ -1.7
SMD3YLR147C NOP2P40991 618 aaKnown RBP4.46□□□□□ -1.7
SMD3YLR147C YAT1P80235 687 aa4.46□□□□□ -1.7
SMD3YLR147C GEP3Q08622 556 aa4.46□□□□□ -1.7
SMD3YLR147C YPL191CQ08930 360 aa4.46□□□□□ -1.7
SMD3YLR147C CRC1Q12289 327 aa4.46□□□□□ -1.7
SMD3YLR147C ADE3P07245 946 aaKnown RBP4.45□□□□□ -1.7
SMD3YLR147C PIF1P07271 859 aa4.45□□□□□ -1.7
SMD3YLR147C POL3P15436 1097 aa4.45□□□□□ -1.7
SMD3YLR147C PDE1P22434 369 aa4.45□□□□□ -1.7
SMD3YLR147C MCM3P24279 971 aaKnown RBP4.45□□□□□ -1.7
SMD3YLR147C RPF2P36160 344 aaKnown RBP4.45□□□□□ -1.7
SMD3YLR147C CPR6P53691 371 aaKnown RBP4.45□□□□□ -1.7
SMD3YLR147C SNU56Q03782 492 aaKnown RBP4.45□□□□□ -1.7
SMD3YLR147C ARA2Q04212 335 aa4.45□□□□□ -1.7
SMD3YLR147C HIM1Q06674 414 aa4.45□□□□□ -1.7
SMD3YLR147C IWR1Q07532 353 aaPredicted RBP4.45□□□□□ -1.7
SMD3YLR147C SUL2Q12325 893 aa4.45□□□□□ -1.7
SMD3YLR147C BIK1P11709 440 aa4.44□□□□□ -1.7
SMD3YLR147C YAP1P19880 650 aaKnown RBP4.44□□□□□ -1.7
SMD3YLR147C RIT1P23796 513 aa4.44□□□□□ -1.7
SMD3YLR147C GSH1P32477 678 aa4.44□□□□□ -1.7
SMD3YLR147C NPA3P47122 385 aa4.44□□□□□ -1.7
SMD3YLR147C COP1P53622 1201 aaKnown RBP4.44□□□□□ -1.7
SMD3YLR147C SEC5P89102 971 aa4.44□□□□□ -1.7
SMD3YLR147C YPL108WQ02872 168 aaPredicted RBP4.44□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms