RNA–Protein interactions for RNA: YLR062C

BUD28, Transcript of Dubious open reading frame, yeastyeast

Gene BUD28, Length 378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD28YLR062C PEX15Q08215 383 aa5.21□□□□□ -1.58
BUD28YLR062C DAS2Q12084 232 aa5.21□□□□□ -1.58
BUD28YLR062C PER33Q12144 273 aa5.21□□□□□ -1.58
BUD28YLR062C YLR046CQ12253 270 aa5.21□□□□□ -1.58
BUD28YLR062C MIS1P09440 975 aaKnown RBP5.2□□□□□ -1.58
BUD28YLR062C RPL40AP0CH08 128 aaKnown RBP5.2□□□□□ -1.58
BUD28YLR062C RPL40BP0CH09 128 aaKnown RBP5.2□□□□□ -1.58
BUD28YLR062C MTF2P10849 440 aa5.2□□□□□ -1.58
BUD28YLR062C PYC1P11154 1178 aaKnown RBP5.2□□□□□ -1.58
BUD28YLR062C SEC63P14906 663 aa5.2□□□□□ -1.58
BUD28YLR062C DBF4P32325 704 aa5.2□□□□□ -1.58
BUD28YLR062C PYC2P32327 1180 aaKnown RBP5.2□□□□□ -1.58
BUD28YLR062C SPC110P32380 944 aa5.2□□□□□ -1.58
BUD28YLR062C HXT1P32465 570 aa5.2□□□□□ -1.58
BUD28YLR062C TYE7P33122 291 aaPredicted RBP5.2□□□□□ -1.58
BUD28YLR062C MIC60P36112 540 aa5.2□□□□□ -1.58
BUD28YLR062C FUI1P38196 639 aa5.2□□□□□ -1.58
BUD28YLR062C HIS2P38635 335 aa5.2□□□□□ -1.58
BUD28YLR062C SAK1P38990 1142 aa5.2□□□□□ -1.58
BUD28YLR062C PCF11P39081 626 aaPredicted RBP5.2□□□□□ -1.58
BUD28YLR062C AIR1P40507 360 aaKnown RBP5.2□□□□□ -1.58
BUD28YLR062C RRT5P43607 289 aa5.2□□□□□ -1.58
BUD28YLR062C AIM23P47015 356 aa5.2□□□□□ -1.58
BUD28YLR062C AMA1P50082 593 aa5.2□□□□□ -1.58
BUD28YLR062C YNL247WP53852 767 aaKnown RBP5.2□□□□□ -1.58
BUD28YLR062C CLU1Q03690 1277 aaKnown RBP5.2□□□□□ -1.58
BUD28YLR062C HEL2Q05580 639 aaKnown RBP5.2□□□□□ -1.58
BUD28YLR062C VPS38Q05919 439 aa5.2□□□□□ -1.58
BUD28YLR062C KAP95Q06142 861 aaKnown RBP5.2□□□□□ -1.58
BUD28YLR062C PIN2Q12057 282 aa5.2□□□□□ -1.58
BUD28YLR062C GPM3Q12326 303 aa5.2□□□□□ -1.58
BUD28YLR062C IZH4Q99393 312 aa5.2□□□□□ -1.58
BUD28YLR062C DAL81P21657 970 aa5.19□□□□□ -1.58
BUD28YLR062C RAD57P25301 460 aa5.19□□□□□ -1.58
BUD28YLR062C RRP43P25359 394 aaPredicted RBP5.19□□□□□ -1.58
BUD28YLR062C GEX1P25596 615 aa5.19□□□□□ -1.58
BUD28YLR062C CCR4P31384 837 aaKnown RBP5.19□□□□□ -1.58
BUD28YLR062C HXT3P32466 567 aaKnown RBP5.19□□□□□ -1.58
BUD28YLR062C KAR9P32526 644 aa5.19□□□□□ -1.58
BUD28YLR062C ADD66P36040 267 aa5.19□□□□□ -1.58
BUD28YLR062C GEX2P36173 615 aa5.19□□□□□ -1.58
BUD28YLR062C MRPL40P36534 297 aa5.19□□□□□ -1.58
BUD28YLR062C APM3P38153 483 aa5.19□□□□□ -1.58
BUD28YLR062C RRT2P38332 387 aa5.19□□□□□ -1.58
BUD28YLR062C SOH1P38633 127 aa5.19□□□□□ -1.58
BUD28YLR062C WSC4P38739 605 aa5.19□□□□□ -1.58
BUD28YLR062C AIM18P38884 321 aa5.19□□□□□ -1.58
BUD28YLR062C SPC72P39723 622 aa5.19□□□□□ -1.58
BUD28YLR062C YEL028WP39989 153 aa5.19□□□□□ -1.58
BUD28YLR062C NPY1P53164 384 aa5.19□□□□□ -1.58
BUD28YLR062C HST3P53687 447 aa5.19□□□□□ -1.58
BUD28YLR062C NOG2P53742 486 aaKnown RBP5.19□□□□□ -1.58
BUD28YLR062C YNR063WP53749 607 aa5.19□□□□□ -1.58
BUD28YLR062C JJJ1P53863 590 aa5.19□□□□□ -1.58
BUD28YLR062C DOS2P54858 310 aa5.19□□□□□ -1.58
BUD28YLR062C DIG1Q03063 452 aaKnown RBP5.19□□□□□ -1.58
BUD28YLR062C PIR1Q03178 341 aa5.19□□□□□ -1.58
BUD28YLR062C NGL3Q03210 505 aa5.19□□□□□ -1.58
BUD28YLR062C SOV1Q04748 898 aa5.19□□□□□ -1.58
BUD28YLR062C PUF3Q07807 879 aaKnown RBP RIP-Chip data5.19□□□□□ -1.58not detected
BUD28YLR062C PEX11Q12462 236 aa5.19□□□□□ -1.58
BUD28YLR062C RAD3P06839 778 aa5.18□□□□□ -1.58
BUD28YLR062C CDC4P07834 779 aa5.18□□□□□ -1.58
BUD28YLR062C YCR015CP25616 317 aa5.18□□□□□ -1.58
BUD28YLR062C MEI4P29467 408 aa5.18□□□□□ -1.58
BUD28YLR062C MCM2P29469 868 aa5.18□□□□□ -1.58
BUD28YLR062C RML2P32611 393 aa5.18□□□□□ -1.58
BUD28YLR062C AIM26P32858 118 aa5.18□□□□□ -1.58
BUD28YLR062C YBL055CP34220 418 aaPredicted RBP5.18□□□□□ -1.58
BUD28YLR062C PXA2P34230 853 aa5.18□□□□□ -1.58
BUD28YLR062C PCH2P38126 564 aa5.18□□□□□ -1.58
BUD28YLR062C SRP68P38687 599 aaKnown RBP5.18□□□□□ -1.58
BUD28YLR062C STL1P39932 569 aa5.18□□□□□ -1.58
BUD28YLR062C DLD2P46681 530 aaKnown RBP5.18□□□□□ -1.58
BUD28YLR062C RPS10BP46784 105 aaKnown RBP5.18□□□□□ -1.58
BUD28YLR062C MNN11P46985 422 aaKnown RBP5.18□□□□□ -1.58
BUD28YLR062C TCB2P48231 1178 aa5.18□□□□□ -1.58
BUD28YLR062C BRO1P48582 844 aa5.18□□□□□ -1.58
BUD28YLR062C RFX1P48743 811 aa5.18□□□□□ -1.58
BUD28YLR062C ASN2P49090 572 aaKnown RBP5.18□□□□□ -1.58
BUD28YLR062C KAP114P53067 1004 aa5.18□□□□□ -1.58
BUD28YLR062C AIM14P53109 570 aa5.18□□□□□ -1.58
BUD28YLR062C PRM1P53835 661 aa5.18□□□□□ -1.58
BUD28YLR062C ALF1P53904 254 aa5.18□□□□□ -1.58
BUD28YLR062C RPL34AP87262 121 aaPredicted RBP5.18□□□□□ -1.58
BUD28YLR062C UFO1Q04511 668 aa5.18□□□□□ -1.58
BUD28YLR062C MRX10Q05648 414 aa5.18□□□□□ -1.58
BUD28YLR062C THI7Q05998 598 aa5.18□□□□□ -1.58
BUD28YLR062C ISR1Q06098 443 aaKnown RBP5.18□□□□□ -1.58
BUD28YLR062C TPO1Q07824 586 aa5.18□□□□□ -1.58
BUD28YLR062C YLR001CQ07895 862 aa5.18□□□□□ -1.58
BUD28YLR062C RPS10AQ08745 105 aaPredicted RBP5.18□□□□□ -1.58
BUD28YLR062C POL2P21951 2222 aaKnown RBP5.17□□□□□ -1.58
BUD28YLR062C SEC23P15303 768 aaKnown RBP5.17□□□□□ -1.58
BUD28YLR062C CLC1P17891 233 aa5.17□□□□□ -1.58
BUD28YLR062C MRPL8P22353 238 aa5.17□□□□□ -1.58
BUD28YLR062C TFB1P32776 642 aa5.17□□□□□ -1.58
BUD28YLR062C MKS1P34072 584 aa5.17□□□□□ -1.58
BUD28YLR062C SRX1P36077 127 aa5.17□□□□□ -1.58
BUD28YLR062C BIT2P38346 545 aa5.17□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms