RNA–Protein interactions for RNA: YKL057C

NUP120, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP120, Length 3,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP120YKL057C CRG1P38892 291 aaRIP-Chip data2.47□□□□□ -2.01not detected
NUP120YKL057C YNR061CP53747 219 aa2.47□□□□□ -2.01
NUP120YKL057C MTG1Q03151 367 aaPredicted RBP2.47□□□□□ -2.01
NUP120YKL057C EFR3Q03653 782 aaKnown RBP2.47□□□□□ -2.01
NUP120YKL057C TPO3Q06451 622 aa2.47□□□□□ -2.01
NUP120YKL057C NEW1Q08972 1196 aaKnown RBP2.47□□□□□ -2.01
NUP120YKL057C LCB1P25045 558 aaKnown RBP2.47□□□□□ -2.01
NUP120YKL057C DBF20P32328 564 aa2.47□□□□□ -2.01
NUP120YKL057C ARP2P32381 391 aaKnown RBP2.47□□□□□ -2.01
NUP120YKL057C BEM3P32873 1128 aa2.47□□□□□ -2.01
NUP120YKL057C ASG1P40467 964 aa2.47□□□□□ -2.01
NUP120YKL057C VPS25P47142 202 aa2.47□□□□□ -2.01
NUP120YKL057C YGR079WP53249 370 aa2.47□□□□□ -2.01
NUP120YKL057C CPR8P53728 308 aa2.47□□□□□ -2.01
NUP120YKL057C TMN2Q04562 672 aa2.47□□□□□ -2.01
NUP120YKL057C ARO10Q06408 635 aa2.47□□□□□ -2.01
NUP120YKL057C CRD1Q07560 283 aa2.47□□□□□ -2.01
NUP120YKL057C RRP6Q12149 733 aaKnown RBP2.47□□□□□ -2.01
NUP120YKL057C ADE3P07245 946 aaKnown RBP2.46□□□□□ -2.01
NUP120YKL057C MIH1P23748 554 aa2.46□□□□□ -2.01
NUP120YKL057C DCG1P32460 244 aa2.46□□□□□ -2.01
NUP120YKL057C FSH1P38777 243 aaKnown RBP2.46□□□□□ -2.01
NUP120YKL057C HRB1P38922 454 aaKnown RBP RIP-Chip data2.46□□□□□ -2.01not detected
NUP120YKL057C REG1Q00816 1014 aa2.46□□□□□ -2.01
NUP120YKL057C CSR1Q06705 408 aaKnown RBP2.46□□□□□ -2.01
NUP120YKL057C PSR1Q07800 427 aa2.46□□□□□ -2.01
NUP120YKL057C IRC10Q08118 586 aa2.46□□□□□ -2.01
NUP120YKL057C BMS1Q08965 1183 aaKnown RBP2.46□□□□□ -2.01
NUP120YKL057C RNR3P21672 869 aaKnown RBP2.46□□□□□ -2.02
NUP120YKL057C MSM1P22438 575 aa2.46□□□□□ -2.02
NUP120YKL057C CBP4P37267 147 aa2.46□□□□□ -2.02
NUP120YKL057C ICS2P38284 255 aa2.46□□□□□ -2.02
NUP120YKL057C DOT5P40553 215 aa2.46□□□□□ -2.02
NUP120YKL057C QRI7P43122 407 aa2.46□□□□□ -2.02
NUP120YKL057C COG1P53079 417 aa2.46□□□□□ -2.02
NUP120YKL057C ESF2P53743 316 aaKnown RBP2.46□□□□□ -2.02
NUP120YKL057C BUD21Q08492 214 aaPredicted RBP2.46□□□□□ -2.02
NUP120YKL057C HXK2P04807 486 aaKnown RBP2.46□□□□□ -2.02
NUP120YKL057C CDC6P09119 513 aa2.46□□□□□ -2.02
NUP120YKL057C CAP1P28495 268 aaKnown RBP2.46□□□□□ -2.02
NUP120YKL057C PRE4P30657 266 aa2.46□□□□□ -2.02
NUP120YKL057C PAF1P38351 445 aa2.46□□□□□ -2.02
NUP120YKL057C RTS1P38903 757 aa2.46□□□□□ -2.02
NUP120YKL057C MRX1P40050 688 aa2.46□□□□□ -2.02
NUP120YKL057C HOS4P40480 1083 aa2.46□□□□□ -2.02
NUP120YKL057C COQ6P53318 479 aa2.46□□□□□ -2.02
NUP120YKL057C TRS31Q03337 283 aa2.46□□□□□ -2.02
NUP120YKL057C RCR2Q03446 210 aaKnown RBP2.46□□□□□ -2.02
NUP120YKL057C RTC1Q08281 1341 aa2.45□□□□□ -2.02
NUP120YKL057C COX1P00401 534 aa2.45□□□□□ -2.02
NUP120YKL057C MRP2P10663 115 aaPredicted RBP2.45□□□□□ -2.02
NUP120YKL057C VPS34P22543 875 aa2.45□□□□□ -2.02
NUP120YKL057C APN1P22936 367 aa2.45□□□□□ -2.02
NUP120YKL057C UGP1P32861 499 aaKnown RBP2.45□□□□□ -2.02
NUP120YKL057C SET3P36124 751 aa2.45□□□□□ -2.02
NUP120YKL057C MRPL7P36519 292 aa2.45□□□□□ -2.02
NUP120YKL057C MOH1P38191 138 aa2.45□□□□□ -2.02
NUP120YKL057C FUI1P38196 639 aa2.45□□□□□ -2.02
NUP120YKL057C RSM28Q03430 361 aa2.45□□□□□ -2.02
NUP120YKL057C ECM22Q05958 814 aaPredicted RBP2.45□□□□□ -2.02
NUP120YKL057C AAD4Q07747 329 aa2.45□□□□□ -2.02
NUP120YKL057C TIP41Q12199 356 aa2.45□□□□□ -2.02
NUP120YKL057C AI5_ALPHAQ9ZZX1 630 aa2.45□□□□□ -2.02
NUP120YKL057C YBR085C-AO43137 85 aa2.45□□□□□ -2.02
NUP120YKL057C SEC53P07283 254 aaKnown RBP2.45□□□□□ -2.02
NUP120YKL057C PRE2P30656 287 aaKnown RBP2.45□□□□□ -2.02
NUP120YKL057C MAL33P38157 468 aa2.45□□□□□ -2.02
NUP120YKL057C APD1P38281 316 aa2.45□□□□□ -2.02
NUP120YKL057C UBA4P38820 440 aa2.45□□□□□ -2.02
NUP120YKL057C TAX4P47030 604 aa2.45□□□□□ -2.02
NUP120YKL057C SEC5P89102 971 aa2.45□□□□□ -2.02
NUP120YKL057C CTF4Q01454 927 aa2.45□□□□□ -2.02
NUP120YKL057C STP3Q05937 343 aa2.45□□□□□ -2.02
NUP120YKL057C IWR1Q07532 353 aaPredicted RBP2.45□□□□□ -2.02
NUP120YKL057C SPO16P17122 198 aa2.44□□□□□ -2.02
NUP120YKL057C AAD3P25612 363 aa2.44□□□□□ -2.02
NUP120YKL057C LAC1P28496 418 aa2.44□□□□□ -2.02
NUP120YKL057C NAB3P38996 802 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
NUP120YKL057C ERP2P39704 215 aa2.44□□□□□ -2.02
NUP120YKL057C SPC19Q03954 165 aa2.44□□□□□ -2.02
NUP120YKL057C TRI1Q05024 226 aa2.44□□□□□ -2.02
NUP120YKL057C RDR1Q08904 546 aa2.44□□□□□ -2.02
NUP120YKL057C APM4Q99186 491 aa2.44□□□□□ -2.02
NUP120YKL057C YMR084WA2P2R3 262 aa2.44□□□□□ -2.02
NUP120YKL057C PWP2P25635 923 aaKnown RBP2.44□□□□□ -2.02
NUP120YKL057C UBS1P38290 277 aa2.44□□□□□ -2.02
NUP120YKL057C UBP7P40453 1071 aa2.44□□□□□ -2.02
NUP120YKL057C SDS3P40505 327 aa2.44□□□□□ -2.02
NUP120YKL057C LYS14P40971 790 aa2.44□□□□□ -2.02
NUP120YKL057C MAF1P41910 395 aa2.44□□□□□ -2.02
NUP120YKL057C RPS7BP48164 190 aaKnown RBP2.44□□□□□ -2.02
NUP120YKL057C ASE1P50275 885 aa2.44□□□□□ -2.02
NUP120YKL057C VPS73P53142 486 aaKnown RBP2.44□□□□□ -2.02
NUP120YKL057C SWT1Q12104 458 aa2.44□□□□□ -2.02
NUP120YKL057C FBP1P09201 348 aa2.44□□□□□ -2.02
NUP120YKL057C ACO1P19414 778 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
NUP120YKL057C MCM3P24279 971 aaKnown RBP2.44□□□□□ -2.02
NUP120YKL057C YNK1P36010 153 aaKnown RBP2.44□□□□□ -2.02
NUP120YKL057C FLO5P38894 1075 aa2.44□□□□□ -2.02
NUP120YKL057C UBP8P50102 471 aa2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms