RNA–Protein interactions for RNA: YKL021C

MAK11, Transcript of Protein involved in an early step of 60S ribosomal subunit biogenesis, yeast

Gene MAK11, Length 1,407 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MAK11	YKL021C	BPL1	P48445	690 aa	Predicted RBP	4.61	□□□□□ -1.67
MAK11	YKL021C	COG2	P53271	262 aa		4.61	□□□□□ -1.67
MAK11	YKL021C	VPS64	Q03944	604 aa		4.61	□□□□□ -1.67
MAK11	YKL021C	YML053C	Q04978	212 aa		4.61	□□□□□ -1.67
MAK11	YKL021C	YDL242W	Q07746	117 aa		4.61	□□□□□ -1.67
MAK11	YKL021C	ICL2	Q12031	575 aa		4.61	□□□□□ -1.67
MAK11	YKL021C	CTT1	P06115	562 aa		4.6	□□□□□ -1.67
MAK11	YKL021C	BEM3	P32873	1128 aa		4.6	□□□□□ -1.67
MAK11	YKL021C	APD1	P38281	316 aa		4.6	□□□□□ -1.67
MAK11	YKL021C	MAM1	P40065	302 aa		4.6	□□□□□ -1.67
MAK11	YKL021C	QRI7	P43122	407 aa		4.6	□□□□□ -1.67
MAK11	YKL021C	EIS1	Q05050	843 aa	Known RBP	4.6	□□□□□ -1.67
MAK11	YKL021C	MLC2	Q06580	163 aa		4.6	□□□□□ -1.67
MAK11	YKL021C	AIM6	Q07716	390 aa		4.6	□□□□□ -1.67
MAK11	YKL021C	MSS18	P08593	268 aa		4.59	□□□□□ -1.67
MAK11	YKL021C	ULP2	P40537	1034 aa	Predicted RBP	4.59	□□□□□ -1.67
MAK11	YKL021C	TEP1	P53916	434 aa		4.59	□□□□□ -1.67
MAK11	YKL021C	RSC9	Q03124	581 aa		4.59	□□□□□ -1.67
MAK11	YKL021C	ORM2	Q06144	216 aa		4.59	□□□□□ -1.67
MAK11	YKL021C	IRC3	Q06683	689 aa		4.59	□□□□□ -1.67
MAK11	YKL021C	AFT2	Q08957	416 aa		4.59	□□□□□ -1.67
MAK11	YKL021C	PRS5	Q12265	496 aa	Known RBP	4.59	□□□□□ -1.67
MAK11	YKL021C	PNO1	Q99216	274 aa	Known RBP	4.59	□□□□□ -1.67
MAK11	YKL021C	RTC1	Q08281	1341 aa		4.59	□□□□□ -1.67
MAK11	YKL021C	KGD2	P19262	463 aa	Predicted RBP	4.58	□□□□□ -1.68
MAK11	YKL021C	SIR1	P21691	654 aa		4.58	□□□□□ -1.68
MAK11	YKL021C	YKL133C	P36066	463 aa		4.58	□□□□□ -1.68
MAK11	YKL021C	SPC72	P39723	622 aa		4.58	□□□□□ -1.68
MAK11	YKL021C	LAS21	P40367	830 aa		4.58	□□□□□ -1.68
MAK11	YKL021C	NMD5	P46970	1048 aa		4.58	□□□□□ -1.68
MAK11	YKL021C	PLM2	Q04383	521 aa		4.58	□□□□□ -1.68
MAK11	YKL021C	RAD34	Q06665	692 aa		4.58	□□□□□ -1.68
MAK11	YKL021C	SWI4	P25302	1093 aa	Known RBP	4.57	□□□□□ -1.68
MAK11	YKL021C	APM3	P38153	483 aa		4.57	□□□□□ -1.68
MAK11	YKL021C	ERC1	P38767	581 aa		4.57	□□□□□ -1.68
MAK11	YKL021C	LNP1	P38878	278 aa		4.57	□□□□□ -1.68
MAK11	YKL021C	ATP4	P05626	244 aa		4.56	□□□□□ -1.68
MAK11	YKL021C	SES1	P07284	462 aa	Known RBP	4.56	□□□□□ -1.68
MAK11	YKL021C	PTP1	P25044	335 aa		4.56	□□□□□ -1.68
MAK11	YKL021C	PTP2	P29461	750 aa		4.56	□□□□□ -1.68
MAK11	YKL021C	ECM32	P32644	1121 aa	Known RBP	4.56	□□□□□ -1.68
MAK11	YKL021C	KES1	P35844	434 aa	Known RBP	4.56	□□□□□ -1.68
MAK11	YKL021C	IMD2	P38697	523 aa	Known RBP	4.56	□□□□□ -1.68
MAK11	YKL021C	RAD26	P40352	1085 aa		4.56	□□□□□ -1.68
MAK11	YKL021C	HIS6	P40545	261 aa		4.56	□□□□□ -1.68
MAK11	YKL021C	NET1	P47035	1189 aa		4.56	□□□□□ -1.68
MAK11	YKL021C	IMD3	P50095	523 aa	Known RBP	4.56	□□□□□ -1.68
MAK11	YKL021C	HIM1	Q06674	414 aa		4.56	□□□□□ -1.68
MAK11	YKL021C	YOL057W	Q08225	711 aa		4.56	□□□□□ -1.68
MAK11	YKL021C	MAK32	P23060	363 aa		4.55	□□□□□ -1.68
MAK11	YKL021C	FTH1	P38310	465 aa		4.55	□□□□□ -1.68
MAK11	YKL021C	PSA1	P41940	361 aa	Known RBP	4.55	□□□□□ -1.68
MAK11	YKL021C	TAM41	P53230	385 aa		4.55	□□□□□ -1.68
MAK11	YKL021C	YPL071C	Q02864	156 aa		4.55	□□□□□ -1.68
MAK11	YKL021C	ADE3	P07245	946 aa	Known RBP	4.55	□□□□□ -1.68
MAK11	YKL021C	PIF1	P07271	859 aa		4.55	□□□□□ -1.68
MAK11	YKL021C	URE2	P23202	354 aa	Known RBP	4.55	□□□□□ -1.68
MAK11	YKL021C	RIT1	P23796	513 aa		4.55	□□□□□ -1.68
MAK11	YKL021C	UBP7	P40453	1071 aa		4.55	□□□□□ -1.68
MAK11	YKL021C	CIR1	P42940	261 aa		4.55	□□□□□ -1.68
MAK11	YKL021C	TPO3	Q06451	622 aa		4.55	□□□□□ -1.68
MAK11	YKL021C	BI2	P03873	423 aa		4.54	□□□□□ -1.68
MAK11	YKL021C	YMR085W	P0CF18	432 aa		4.54	□□□□□ -1.68
MAK11	YKL021C	POL3	P15436	1097 aa		4.54	□□□□□ -1.68
MAK11	YKL021C	MCM3	P24279	971 aa	Known RBP	4.54	□□□□□ -1.68
MAK11	YKL021C	CAB2	P40506	365 aa		4.54	□□□□□ -1.68
MAK11	YKL021C	SNO3	P43544	222 aa		4.54	□□□□□ -1.68
MAK11	YKL021C	CPR6	P53691	371 aa	Known RBP	4.54	□□□□□ -1.68
MAK11	YKL021C	IDP3	P53982	420 aa	Known RBP	4.54	□□□□□ -1.68
MAK11	YKL021C	STP1	Q00947	519 aa		4.54	□□□□□ -1.68
MAK11	YKL021C	IWR1	Q07532	353 aa	Predicted RBP	4.54	□□□□□ -1.68
MAK11	YKL021C	LYS21	Q12122	440 aa	Known RBP	4.54	□□□□□ -1.68
MAK11	YKL021C	YBR255C-A	Q3E776	120 aa		4.54	□□□□□ -1.68
MAK11	YKL021C	CET1	O13297	549 aa	Predicted RBP	4.53	□□□□□ -1.68
MAK11	YKL021C	YEF3	P16521	1044 aa	Known RBP	4.53	□□□□□ -1.68
MAK11	YKL021C	YBR138C	P38277	524 aa		4.53	□□□□□ -1.68
MAK11	YKL021C	VBA2	P38358	474 aa	Known RBP	4.53	□□□□□ -1.68
MAK11	YKL021C	YHL041W	P38730	149 aa		4.53	□□□□□ -1.68
MAK11	YKL021C	ERV46	P39727	415 aa		4.53	□□□□□ -1.68
MAK11	YKL021C	NPA3	P47122	385 aa		4.53	□□□□□ -1.68
MAK11	YKL021C	TAN1	P53072	289 aa	Predicted RBP	4.53	□□□□□ -1.68
MAK11	YKL021C	ERG13	P54839	491 aa	Known RBP	4.53	□□□□□ -1.68
MAK11	YKL021C	SUL2	Q12325	893 aa		4.53	□□□□□ -1.68
MAK11	YKL021C	PDE1	P22434	369 aa		4.52	□□□□□ -1.69
MAK11	YKL021C	TMT1	P32643	299 aa		4.52	□□□□□ -1.69
MAK11	YKL021C	CIN1	P40987	1014 aa		4.52	□□□□□ -1.69
MAK11	YKL021C	YGR079W	P53249	370 aa		4.52	□□□□□ -1.69
MAK11	YKL021C	SNU56	Q03782	492 aa	Known RBP	4.52	□□□□□ -1.69
MAK11	YKL021C	RRP6	Q12149	733 aa	Known RBP	4.52	□□□□□ -1.69
MAK11	YKL021C	NYV1	Q12255	253 aa		4.52	□□□□□ -1.69
MAK11	YKL021C	CRC1	Q12289	327 aa		4.52	□□□□□ -1.69
MAK11	YKL021C	YAP1	P19880	650 aa	Known RBP	4.51	□□□□□ -1.69
MAK11	YKL021C	GSH1	P32477	678 aa		4.51	□□□□□ -1.69
MAK11	YKL021C	RPF2	P36160	344 aa	Known RBP	4.51	□□□□□ -1.69
MAK11	YKL021C	GLO1	P50107	326 aa		4.51	□□□□□ -1.69
MAK11	YKL021C	IMA1	P53051	589 aa		4.51	□□□□□ -1.69
MAK11	YKL021C	YAT1	P80235	687 aa		4.51	□□□□□ -1.69
MAK11	YKL021C	YPL191C	Q08930	360 aa		4.51	□□□□□ -1.69
MAK11	YKL021C	ICT1	Q12385	394 aa		4.51	□□□□□ -1.69
MAK11	YKL021C	APA1	P16550	321 aa	Known RBP	4.5	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms