RNA–Protein interactions for RNA: YJL179W

PFD1, Transcript of Subunit of heterohexameric prefoldin, yeastyeast

Gene PFD1, Length 330 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PFD1YJL179W PCL8Q08966 492 aa2.04□□□□□ -2.08
PFD1YJL179W YMR230W-AQ3E7B5 62 aa2.04□□□□□ -2.08
PFD1YJL179W YLR419WQ06698 1435 aaKnown RBP2.03□□□□□ -2.08
PFD1YJL179W HMG1P12683 1054 aa2.03□□□□□ -2.08
PFD1YJL179W MEF1P25039 761 aa2.03□□□□□ -2.08
PFD1YJL179W PRE4P30657 266 aa2.03□□□□□ -2.08
PFD1YJL179W GND1P38720 489 aaKnown RBP2.03□□□□□ -2.08
PFD1YJL179W YPL071CQ02864 156 aa2.03□□□□□ -2.08
PFD1YJL179W WAR1Q03631 944 aa2.03□□□□□ -2.08
PFD1YJL179W DSE3Q08729 430 aa2.03□□□□□ -2.08
PFD1YJL179W ATX2Q12067 313 aa2.03□□□□□ -2.08
PFD1YJL179W PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.03□□□□□ -2.08not detected
PFD1YJL179W ENT1Q12518 454 aa2.03□□□□□ -2.08
PFD1YJL179W PSK1P31374 1356 aa2.02□□□□□ -2.09
PFD1YJL179W YML133CQ03099 1374 aa2.02□□□□□ -2.09
PFD1YJL179W YLL067CQ07888 1374 aa2.02□□□□□ -2.09
PFD1YJL179W YLL066CQ99208 1374 aa2.02□□□□□ -2.09
PFD1YJL179W RPS24AP0CX31 135 aaKnown RBP2.02□□□□□ -2.09
PFD1YJL179W RPS24BP0CX32 135 aaKnown RBP2.02□□□□□ -2.09
PFD1YJL179W PRP16P15938 1071 aaPredicted RBP2.02□□□□□ -2.09
PFD1YJL179W PRP45P28004 379 aaPredicted RBP2.02□□□□□ -2.09
PFD1YJL179W PCM1P38628 557 aaKnown RBP2.02□□□□□ -2.09
PFD1YJL179W CRG1P38892 291 aaRIP-Chip data2.02□□□□□ -2.09not detected
PFD1YJL179W DHH1P39517 506 aaKnown RBP2.02□□□□□ -2.09
PFD1YJL179W YMR210WQ03649 449 aa2.02□□□□□ -2.09
PFD1YJL179W MLH2Q07980 695 aa2.02□□□□□ -2.09
PFD1YJL179W ADE6P38972 1358 aaKnown RBP2.01□□□□□ -2.09
PFD1YJL179W BI2P03873 423 aa2.01□□□□□ -2.09
PFD1YJL179W AAC1P04710 309 aa2.01□□□□□ -2.09
PFD1YJL179W MAK32P23060 363 aa2.01□□□□□ -2.09
PFD1YJL179W PCL2P25693 308 aa2.01□□□□□ -2.09
PFD1YJL179W FTR1P40088 404 aa2.01□□□□□ -2.09
PFD1YJL179W VRG4P40107 337 aa2.01□□□□□ -2.09
PFD1YJL179W NSE5Q03718 556 aa2.01□□□□□ -2.09
PFD1YJL179W PDS5Q04264 1277 aa2.01□□□□□ -2.09
PFD1YJL179W YLR407WQ06070 228 aa2.01□□□□□ -2.09
PFD1YJL179W YPS7Q06325 596 aa2.01□□□□□ -2.09
PFD1YJL179W ARR3Q06598 404 aa2.01□□□□□ -2.09
PFD1YJL179W MLP1Q02455 1875 aaKnown RBP2.01□□□□□ -2.09
PFD1YJL179W TY4B-HP0C2J7 1802 aa2.01□□□□□ -2.09
PFD1YJL179W TY4B-JP47024 1803 aa2.01□□□□□ -2.09
PFD1YJL179W RRP5Q05022 1729 aaKnown RBP2□□□□□ -2.09
PFD1YJL179W YEF3P16521 1044 aaKnown RBP2□□□□□ -2.09
PFD1YJL179W YKR075CP36155 307 aa2□□□□□ -2.09
PFD1YJL179W CDS1P38221 457 aa2□□□□□ -2.09
PFD1YJL179W LRO1P40345 661 aa2□□□□□ -2.09
PFD1YJL179W YNL058CP53947 316 aa2□□□□□ -2.09
PFD1YJL179W TIM50Q02776 476 aa2□□□□□ -2.09
PFD1YJL179W HIM1Q06674 414 aa2□□□□□ -2.09
PFD1YJL179W STP4Q07351 490 aa2□□□□□ -2.09
PFD1YJL179W CYK3Q07533 885 aa2□□□□□ -2.09
PFD1YJL179W SLM3Q12093 417 aa2□□□□□ -2.09
PFD1YJL179W GIN4Q12263 1142 aa2□□□□□ -2.09
PFD1YJL179W SWI6P09959 803 aa1.99□□□□□ -2.09
PFD1YJL179W ERR1P0CX10 437 aa1.99□□□□□ -2.09
PFD1YJL179W ERR2P0CX11 437 aa1.99□□□□□ -2.09
PFD1YJL179W YFL068WP0CX99 160 aa1.99□□□□□ -2.09
PFD1YJL179W YLL066W-AP0CY00 160 aa1.99□□□□□ -2.09
PFD1YJL179W YLL067W-AP0CY01 160 aa1.99□□□□□ -2.09
PFD1YJL179W STI1P15705 589 aaKnown RBP RIP-Chip data1.99□□□□□ -2.09not detected
PFD1YJL179W RPT3P33298 428 aaKnown RBP1.99□□□□□ -2.09
PFD1YJL179W YEL025CP39991 1188 aa1.99□□□□□ -2.09
PFD1YJL179W YIL169CP40442 995 aa1.99□□□□□ -2.09
PFD1YJL179W AIM14P53109 570 aa1.99□□□□□ -2.09
PFD1YJL179W IMH1Q06704 911 aaKnown RBP1.99□□□□□ -2.09
PFD1YJL179W MRN1Q08925 612 aaKnown RBP RIP-Chip data1.99□□□□□ -2.09not detected
PFD1YJL179W GET3Q12154 354 aaKnown RBP1.99□□□□□ -2.09
PFD1YJL179W YRF1-2P40105 1681 aa1.99□□□□□ -2.09
PFD1YJL179W YRF1-3P0CX14 1859 aa1.99□□□□□ -2.09
PFD1YJL179W YRF1-7P0CX15 1859 aa1.99□□□□□ -2.09
PFD1YJL179W YRF1-6P53819 1859 aa1.99□□□□□ -2.09
PFD1YJL179W MHP1P43638 1398 aa1.98□□□□□ -2.09
PFD1YJL179W AUS1Q08409 1394 aa1.98□□□□□ -2.09
PFD1YJL179W YIL177CP40434 1758 aa1.98□□□□□ -2.09
PFD1YJL179W YJL225CP40889 1758 aa1.98□□□□□ -2.09
PFD1YJL179W FTH1P38310 465 aa1.98□□□□□ -2.09
PFD1YJL179W PRM2P40534 656 aa1.98□□□□□ -2.09
PFD1YJL179W DOT5P40553 215 aa1.98□□□□□ -2.09
PFD1YJL179W AZF1P41696 914 aa1.98□□□□□ -2.09
PFD1YJL179W TAF4P50105 388 aa1.98□□□□□ -2.09
PFD1YJL179W HOS2P53096 452 aaPredicted RBP1.98□□□□□ -2.09
PFD1YJL179W TAP42Q04372 366 aa1.98□□□□□ -2.09
PFD1YJL179W NSE3Q05541 303 aa1.98□□□□□ -2.09
PFD1YJL179W YLR281CQ05863 155 aa1.98□□□□□ -2.09
PFD1YJL179W PNO1Q99216 274 aaKnown RBP1.98□□□□□ -2.09
PFD1YJL179W TOM1Q03280 3268 aa1.97□□□□□ -2.09
PFD1YJL179W SPT7P35177 1332 aa1.97□□□□□ -2.09
PFD1YJL179W PPZ1P26570 692 aa1.97□□□□□ -2.09
PFD1YJL179W GRX4P32642 244 aa1.97□□□□□ -2.09
PFD1YJL179W DSS1P39112 969 aa1.97□□□□□ -2.09
PFD1YJL179W IES1P43579 692 aa1.97□□□□□ -2.09
PFD1YJL179W RRP46P53256 223 aaPredicted RBP1.97□□□□□ -2.09
PFD1YJL179W UGO1Q03327 502 aa1.97□□□□□ -2.09
PFD1YJL179W CRT10Q08226 957 aa1.97□□□□□ -2.09
PFD1YJL179W RSA1Q08932 381 aa1.97□□□□□ -2.09
PFD1YJL179W AHA1Q12449 350 aaKnown RBP1.97□□□□□ -2.09
PFD1YJL179W URB1P34241 1764 aaKnown RBP1.97□□□□□ -2.09
PFD1YJL179W RSF2P46974 1380 aa1.97□□□□□ -2.09
PFD1YJL179W RPS17AP02407 136 aaKnown RBP1.96□□□□□ -2.1
PFD1YJL179W GAL4P04386 881 aa1.96□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms