RNA–Protein interactions for RNA: YHL025W

SNF6, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF6, Length 999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF6YHL025W PEX1P24004 1043 aa11.57□□□□□ -0.56
SNF6YHL025W PAT1P25644 796 aaKnown RBP11.57□□□□□ -0.56
SNF6YHL025W PMI40P29952 429 aaKnown RBP11.57□□□□□ -0.56
SNF6YHL025W URA8P38627 578 aaPredicted RBP11.57□□□□□ -0.56
SNF6YHL025W SMF2P38778 549 aa11.57□□□□□ -0.56
SNF6YHL025W PEX28P38848 579 aa11.57□□□□□ -0.56
SNF6YHL025W SPC97P38863 823 aa11.57□□□□□ -0.56
SNF6YHL025W VPS41P38959 992 aa11.57□□□□□ -0.56
SNF6YHL025W VAC8P39968 578 aa11.57□□□□□ -0.56
SNF6YHL025W UFE1P41834 346 aa11.57□□□□□ -0.56
SNF6YHL025W NRD1P53617 575 aaKnown RBP RIP-Chip data11.57□□□□□ -0.56 RIP-Chip
SNF6YHL025W ECM38Q05902 660 aaPredicted RBP11.57□□□□□ -0.56
SNF6YHL025W BSP1Q06604 576 aa11.57□□□□□ -0.56
SNF6YHL025W YPQ1Q12010 308 aa11.57□□□□□ -0.56
SNF6YHL025W NCA2Q12374 616 aa11.57□□□□□ -0.56
SNF6YHL025W MIS1P09440 975 aaKnown RBP11.56□□□□□ -0.56
SNF6YHL025W UTR2P32623 467 aa11.56□□□□□ -0.56
SNF6YHL025W SEC6P32844 805 aa11.56□□□□□ -0.56
SNF6YHL025W PEX5P35056 612 aa11.56□□□□□ -0.56
SNF6YHL025W SET3P36124 751 aa11.56□□□□□ -0.56
SNF6YHL025W YBP1P38315 674 aa11.56□□□□□ -0.56
SNF6YHL025W RAD26P40352 1085 aa11.56□□□□□ -0.56
SNF6YHL025W TRS85P46944 698 aa11.56□□□□□ -0.56
SNF6YHL025W SLT2Q00772 484 aa11.56□□□□□ -0.56
SNF6YHL025W FAR8Q05040 523 aa11.56□□□□□ -0.56
SNF6YHL025W ARP9Q05123 467 aa11.56□□□□□ -0.56
SNF6YHL025W TEF1P02994 458 aaKnown RBP11.55□□□□□ -0.56
SNF6YHL025W GPA2P10823 449 aa11.55□□□□□ -0.56
SNF6YHL025W SRV2P17555 526 aaKnown RBP11.55□□□□□ -0.56
SNF6YHL025W GID7P25569 745 aa11.55□□□□□ -0.56
SNF6YHL025W URA10P30402 227 aa11.55□□□□□ -0.56
SNF6YHL025W PSE1P32337 1089 aaKnown RBP11.55□□□□□ -0.56
SNF6YHL025W HEM12P32347 362 aaPredicted RBP11.55□□□□□ -0.56
SNF6YHL025W ISF1P32488 338 aa11.55□□□□□ -0.56
SNF6YHL025W REV7P38927 245 aa11.55□□□□□ -0.56
SNF6YHL025W DPH1P40487 425 aaKnown RBP11.55□□□□□ -0.56
SNF6YHL025W DSN1P40568 576 aa11.55□□□□□ -0.56
SNF6YHL025W ROK1P45818 564 aaPredicted RBP11.55□□□□□ -0.56
SNF6YHL025W DLD2P46681 530 aaKnown RBP11.55□□□□□ -0.56
SNF6YHL025W TAN1P53072 289 aaPredicted RBP11.55□□□□□ -0.56
SNF6YHL025W LSC1P53598 329 aaKnown RBP11.55□□□□□ -0.56
SNF6YHL025W MET14Q02196 202 aa11.55□□□□□ -0.56
SNF6YHL025W SWC7Q06707 132 aa11.55□□□□□ -0.56
SNF6YHL025W AFI1Q99222 893 aa11.55□□□□□ -0.56
SNF6YHL025W KIP2P28743 706 aa11.54□□□□□ -0.56
SNF6YHL025W MRS6P32864 603 aaKnown RBP11.54□□□□□ -0.56
SNF6YHL025W ATG12P38316 186 aa11.54□□□□□ -0.56
SNF6YHL025W BST1P43571 1029 aa11.54□□□□□ -0.56
SNF6YHL025W PRP24P49960 444 aaKnown RBP11.54□□□□□ -0.56
SNF6YHL025W SLU7Q02775 382 aaKnown RBP11.54□□□□□ -0.56
SNF6YHL025W RLI1Q03195 608 aaKnown RBP11.54□□□□□ -0.56
SNF6YHL025W ADI1Q03677 179 aa11.54□□□□□ -0.56
SNF6YHL025W YDR344CQ05510 147 aa11.54□□□□□ -0.56
SNF6YHL025W TDA5Q06417 326 aaKnown RBP11.54□□□□□ -0.56
SNF6YHL025W YLR012CQ07927 99 aa11.54□□□□□ -0.56
SNF6YHL025W VHS3Q08438 674 aa11.54□□□□□ -0.56
SNF6YHL025W HSP60P19882 572 aaKnown RBP11.53□□□□□ -0.56
SNF6YHL025W NDI1P32340 513 aa11.53□□□□□ -0.56
SNF6YHL025W SMI1P32566 505 aa11.53□□□□□ -0.56
SNF6YHL025W SGE1P33335 543 aa11.53□□□□□ -0.56
SNF6YHL025W YKL097CP34245 136 aa11.53□□□□□ -0.56
SNF6YHL025W ETR1P38071 380 aa11.53□□□□□ -0.56
SNF6YHL025W SRP68P38687 599 aaKnown RBP11.53□□□□□ -0.56
SNF6YHL025W RRN7P40992 514 aa11.53□□□□□ -0.56
SNF6YHL025W COQ6P53318 479 aa11.53□□□□□ -0.56
SNF6YHL025W TRM112P53738 135 aaPredicted RBP11.53□□□□□ -0.56
SNF6YHL025W MRS2Q01926 470 aa11.53□□□□□ -0.56
SNF6YHL025W PEX34P25584 144 aa11.52□□□□□ -0.57
SNF6YHL025W MET22P32179 357 aa11.52□□□□□ -0.57
SNF6YHL025W SRP101P32916 621 aa11.52□□□□□ -0.57
SNF6YHL025W SQT1P35184 431 aa11.52□□□□□ -0.57
SNF6YHL025W ADD66P36040 267 aa11.52□□□□□ -0.57
SNF6YHL025W KTR4P38131 464 aa11.52□□□□□ -0.57
SNF6YHL025W ELO3P40319 345 aa11.52□□□□□ -0.57
SNF6YHL025W YIL161WP40449 235 aaKnown RBP11.52□□□□□ -0.57
SNF6YHL025W RTN1Q04947 295 aaKnown RBP11.52□□□□□ -0.57
SNF6YHL025W COX5AP00424 153 aa11.51□□□□□ -0.57
SNF6YHL025W YCL068CP25593 260 aa11.51□□□□□ -0.57
SNF6YHL025W KTR7P40504 517 aa11.51□□□□□ -0.57
SNF6YHL025W LSB6P42951 607 aa11.51□□□□□ -0.57
SNF6YHL025W SIW14P53965 281 aa11.51□□□□□ -0.57
SNF6YHL025W DOS2P54858 310 aa11.51□□□□□ -0.57
SNF6YHL025W PGC1Q08959 321 aa11.51□□□□□ -0.57
SNF6YHL025W LDB17Q12342 491 aa11.51□□□□□ -0.57
SNF6YHL025W OCA6Q12454 224 aa11.51□□□□□ -0.57
SNF6YHL025W SSC1P0CS90 654 aaKnown RBP11.5□□□□□ -0.57
SNF6YHL025W AMS1P22855 1083 aa11.5□□□□□ -0.57
SNF6YHL025W PPH22P23595 377 aa11.5□□□□□ -0.57
SNF6YHL025W PUP3P25451 205 aaKnown RBP11.5□□□□□ -0.57
SNF6YHL025W LOS1P33418 1100 aaPredicted RBP11.5□□□□□ -0.57
SNF6YHL025W YHL041WP38730 149 aa11.5□□□□□ -0.57
SNF6YHL025W YFL012WP43580 148 aa11.5□□□□□ -0.57
SNF6YHL025W GND2P53319 492 aa11.5□□□□□ -0.57
SNF6YHL025W BIO5P53744 561 aaKnown RBP11.5□□□□□ -0.57
SNF6YHL025W TOF2Q02208 771 aa11.5□□□□□ -0.57
SNF6YHL025W NSE5Q03718 556 aa11.5□□□□□ -0.57
SNF6YHL025W YET3Q07451 203 aa11.5□□□□□ -0.57
SNF6YHL025W YOR387CQ08910 206 aa11.5□□□□□ -0.57
SNF6YHL025W CDC10P25342 322 aaKnown RBP11.49□□□□□ -0.57
SNF6YHL025W KAR9P32526 644 aa11.49□□□□□ -0.57
Retrieved 100 of 5,963 RNA–protein pairs in 72.7 ms