RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C TIF34P40217 347 aaKnown RBP13.58□□□□□ -0.24
SHU1YHL006C MVP1P40959 511 aaKnown RBP13.58□□□□□ -0.24
SHU1YHL006C MNN10P50108 393 aaKnown RBP13.58□□□□□ -0.24
SHU1YHL006C VPS9P54787 451 aa13.58□□□□□ -0.24
SHU1YHL006C RPL34AP87262 121 aaPredicted RBP13.58□□□□□ -0.24
SHU1YHL006C OCA6Q12454 224 aa13.58□□□□□ -0.24
SHU1YHL006C SEY1Q99287 776 aa13.58□□□□□ -0.24
SHU1YHL006C RAD10P06838 210 aa13.57□□□□□ -0.24
SHU1YHL006C LIP5P32875 414 aa13.57□□□□□ -0.24
SHU1YHL006C YPT35P38815 214 aaKnown RBP13.57□□□□□ -0.24
SHU1YHL006C PFS1P38872 237 aa13.57□□□□□ -0.24
SHU1YHL006C PAN6P40459 309 aa13.57□□□□□ -0.24
SHU1YHL006C ALY2P47029 1046 aa13.57□□□□□ -0.24
SHU1YHL006C MNT2P53059 558 aa13.57□□□□□ -0.24
SHU1YHL006C KAP114P53067 1004 aa13.57□□□□□ -0.24
SHU1YHL006C APL5Q08951 932 aaKnown RBP13.57□□□□□ -0.24
SHU1YHL006C UBR1P19812 1950 aa13.56□□□□□ -0.24
SHU1YHL006C LEU1P07264 779 aaKnown RBP13.56□□□□□ -0.24
SHU1YHL006C ALY1P36117 915 aa13.56□□□□□ -0.24
SHU1YHL006C TCD1P38756 429 aa13.56□□□□□ -0.24
SHU1YHL006C COG7P53195 279 aa13.56□□□□□ -0.24
SHU1YHL006C YDL129WQ07555 291 aa13.56□□□□□ -0.24
SHU1YHL006C NAG1Q8TGN9 163 aa13.56□□□□□ -0.24
SHU1YHL006C AAT2P23542 418 aaKnown RBP13.55□□□□□ -0.24
SHU1YHL006C SLX5P32828 619 aaKnown RBP13.55□□□□□ -0.24
SHU1YHL006C PMT1P33775 817 aa13.55□□□□□ -0.24
SHU1YHL006C PPE1P38796 400 aa13.55□□□□□ -0.24
SHU1YHL006C SAW1P39735 261 aa13.55□□□□□ -0.24
SHU1YHL006C RAD26P40352 1085 aa13.55□□□□□ -0.24
SHU1YHL006C EFM4P40516 257 aa13.55□□□□□ -0.24
SHU1YHL006C GLG2P47011 380 aa13.55□□□□□ -0.24
SHU1YHL006C IPI3P53877 555 aa13.55□□□□□ -0.24
SHU1YHL006C CBC2Q08920 208 aaKnown RBP RIP-Chip data13.55□□□□□ -0.24not detected
SHU1YHL006C Q0182Q9ZZW1 134 aa13.55□□□□□ -0.24
SHU1YHL006C YLR462WO13556 202 aa13.54□□□□□ -0.24
SHU1YHL006C COX5AP00424 153 aa13.54□□□□□ -0.24
SHU1YHL006C SLY1P22213 666 aa13.54□□□□□ -0.24
SHU1YHL006C CHL1P22516 861 aaPredicted RBP13.54□□□□□ -0.24
SHU1YHL006C MRS6P32864 603 aaKnown RBP13.54□□□□□ -0.24
SHU1YHL006C PCA1P38360 1216 aa13.54□□□□□ -0.24
SHU1YHL006C YHL049CP38722 271 aa13.54□□□□□ -0.24
SHU1YHL006C OTU2P38747 307 aaKnown RBP13.54□□□□□ -0.24
SHU1YHL006C ARG2P40360 574 aa13.54□□□□□ -0.24
SHU1YHL006C MKT1P40850 830 aaKnown RBP13.54□□□□□ -0.24
SHU1YHL006C YFL064CP43540 174 aa13.54□□□□□ -0.24
SHU1YHL006C TIM13P53299 105 aa13.54□□□□□ -0.24
SHU1YHL006C SFI1Q12369 946 aa13.54□□□□□ -0.24
SHU1YHL006C YBL111CQ3E7Y5 667 aa13.54□□□□□ -0.24
SHU1YHL006C TUB3P09734 445 aaKnown RBP13.53□□□□□ -0.24
SHU1YHL006C PMS1P14242 873 aa13.53□□□□□ -0.24
SHU1YHL006C SEC23P15303 768 aaKnown RBP13.53□□□□□ -0.24
SHU1YHL006C PAT1P25644 796 aaKnown RBP13.53□□□□□ -0.24
SHU1YHL006C LCP5P40079 357 aaPredicted RBP13.53□□□□□ -0.24
SHU1YHL006C YPS6P40583 537 aa13.53□□□□□ -0.24
SHU1YHL006C OSW7P43611 510 aa13.53□□□□□ -0.24
SHU1YHL006C YJR124CP47159 448 aa13.53□□□□□ -0.24
SHU1YHL006C BTN2P53286 410 aa13.53□□□□□ -0.24
SHU1YHL006C ALF1P53904 254 aa13.53□□□□□ -0.24
SHU1YHL006C REG1Q00816 1014 aa13.53□□□□□ -0.24
SHU1YHL006C YPR114WQ06107 315 aa13.53□□□□□ -0.24
SHU1YHL006C CMS1Q07897 291 aaKnown RBP13.53□□□□□ -0.24
SHU1YHL006C MNE1P24720 663 aa13.52□□□□□ -0.25
SHU1YHL006C RCK2P38623 610 aa13.52□□□□□ -0.25
SHU1YHL006C ROK1P45818 564 aaPredicted RBP13.52□□□□□ -0.25
SHU1YHL006C SNO2P53823 222 aa13.52□□□□□ -0.25
SHU1YHL006C ENT5Q03769 411 aaKnown RBP13.52□□□□□ -0.25
SHU1YHL006C TRE2Q08693 809 aa13.52□□□□□ -0.25
SHU1YHL006C PGC1Q08959 321 aa13.52□□□□□ -0.25
SHU1YHL006C GNT1Q12096 491 aa13.52□□□□□ -0.25
SHU1YHL006C SCH9P11792 824 aaKnown RBP13.51□□□□□ -0.25
SHU1YHL006C SFL1P20134 766 aa13.51□□□□□ -0.25
SHU1YHL006C TGL4P36165 910 aa13.51□□□□□ -0.25
SHU1YHL006C SEC9P40357 651 aa13.51□□□□□ -0.25
SHU1YHL006C VAC7P53950 1165 aa13.51□□□□□ -0.25
SHU1YHL006C MSH6Q03834 1242 aa13.51□□□□□ -0.25
SHU1YHL006C OPT2Q06593 877 aa13.51□□□□□ -0.25
SHU1YHL006C YDR018CQ12185 396 aa13.51□□□□□ -0.25
SHU1YHL006C STB3Q12427 513 aa13.51□□□□□ -0.25
SHU1YHL006C COX3P00420 269 aa13.5□□□□□ -0.25
SHU1YHL006C TAE1P38340 232 aa13.5□□□□□ -0.25
SHU1YHL006C ELO3P40319 345 aa13.5□□□□□ -0.25
SHU1YHL006C YML6P51998 286 aa13.5□□□□□ -0.25
SHU1YHL006C MTO1P53070 669 aa13.5□□□□□ -0.25
SHU1YHL006C NMA111P53920 997 aa13.5□□□□□ -0.25
SHU1YHL006C CTR9P89105 1077 aa13.5□□□□□ -0.25
SHU1YHL006C YMR178WQ03219 274 aaKnown RBP13.5□□□□□ -0.25
SHU1YHL006C EAF1Q06337 982 aa13.5□□□□□ -0.25
SHU1YHL006C CUP1-1P0CX80 61 aa13.49□□□□□ -0.25
SHU1YHL006C CUP1-2P0CX81 61 aa13.49□□□□□ -0.25
SHU1YHL006C PMA2P19657 947 aa13.49□□□□□ -0.25
SHU1YHL006C YHL041WP38730 149 aa13.49□□□□□ -0.25
SHU1YHL006C FAA3P39002 694 aa13.49□□□□□ -0.25
SHU1YHL006C GND2P53319 492 aa13.49□□□□□ -0.25
SHU1YHL006C ARP9Q05123 467 aa13.49□□□□□ -0.25
SHU1YHL006C AAD15Q08361 143 aa13.49□□□□□ -0.25
SHU1YHL006C MPH2P0CD99 609 aa13.48□□□□□ -0.25
SHU1YHL006C RBK1P25332 333 aa13.48□□□□□ -0.25
SHU1YHL006C IRS4P36115 615 aaKnown RBP13.48□□□□□ -0.25
SHU1YHL006C MCX1P38323 520 aaPredicted RBP13.48□□□□□ -0.25
SHU1YHL006C DIA4P38705 446 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 5,963 RNA–protein pairs in 44.7 ms