RNA–Protein interactions for RNA: YFL044C

OTU1, Transcript of Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p, yeast

Gene OTU1, Length 906 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
OTU1	YFL044C	MEX67	Q99257	599 aa	Known RBP	4.11	□□□□□ -1.75
OTU1	YFL044C	GAL80	P04387	435 aa		4.1	□□□□□ -1.75
OTU1	YFL044C	MPH2	P0CD99	609 aa		4.1	□□□□□ -1.75
OTU1	YFL044C	FRS2	P15625	503 aa	Known RBP	4.1	□□□□□ -1.75
OTU1	YFL044C	TRX2	P22803	104 aa	Known RBP	4.1	□□□□□ -1.75
OTU1	YFL044C	SGF29	P25554	259 aa		4.1	□□□□□ -1.75
OTU1	YFL044C	PEX34	P25584	144 aa		4.1	□□□□□ -1.75
OTU1	YFL044C	PLC1	P32383	869 aa		4.1	□□□□□ -1.75
OTU1	YFL044C	YSC83	P32792	385 aa		4.1	□□□□□ -1.75
OTU1	YFL044C	PEX2	P32800	271 aa		4.1	□□□□□ -1.75
OTU1	YFL044C	MTC2	P34246	357 aa		4.1	□□□□□ -1.75
OTU1	YFL044C	SEG2	P34250	1132 aa		4.1	□□□□□ -1.75
OTU1	YFL044C	VPS24	P36095	224 aa	Known RBP	4.1	□□□□□ -1.75
OTU1	YFL044C	ABZ1	P37254	787 aa	Predicted RBP	4.1	□□□□□ -1.75
OTU1	YFL044C	YBR238C	P38330	731 aa	Known RBP	4.1	□□□□□ -1.75
OTU1	YFL044C	FMO1	P38866	432 aa		4.1	□□□□□ -1.75
OTU1	YFL044C	UBP5	P39944	805 aa		4.1	□□□□□ -1.75
OTU1	YFL044C	THI6	P41835	540 aa		4.1	□□□□□ -1.75
OTU1	YFL044C	TAF1	P46677	1066 aa		4.1	□□□□□ -1.75
OTU1	YFL044C	FYV8	P46949	817 aa	Known RBP	4.1	□□□□□ -1.75
OTU1	YFL044C	YJR096W	P47137	282 aa		4.1	□□□□□ -1.75
OTU1	YFL044C	PEX14	P53112	341 aa		4.1	□□□□□ -1.75
OTU1	YFL044C	YGR283C	P53336	341 aa	Predicted RBP	4.1	□□□□□ -1.75
OTU1	YFL044C	RTC4	P53850	401 aa		4.1	□□□□□ -1.75
OTU1	YFL044C	SEC5	P89102	971 aa		4.1	□□□□□ -1.75
OTU1	YFL044C	STP1	Q00947	519 aa		4.1	□□□□□ -1.75
OTU1	YFL044C	VTC3	Q02725	835 aa		4.1	□□□□□ -1.75
OTU1	YFL044C	SIZ1	Q04195	904 aa		4.1	□□□□□ -1.75
OTU1	YFL044C	PEX19	Q07418	342 aa		4.1	□□□□□ -1.75
OTU1	YFL044C	XYL2	Q07993	356 aa		4.1	□□□□□ -1.75
OTU1	YFL044C	YOR352W	Q08816	343 aa		4.1	□□□□□ -1.75
OTU1	YFL044C	DCS2	Q12123	353 aa		4.1	□□□□□ -1.75
OTU1	YFL044C	FOB1	O13329	566 aa		4.09	□□□□□ -1.75
OTU1	YFL044C	RPS14A	P06367	137 aa	Known RBP	4.09	□□□□□ -1.75
OTU1	YFL044C	CMP2	P14747	604 aa		4.09	□□□□□ -1.75
OTU1	YFL044C	PFK1	P16861	987 aa	Known RBP	4.09	□□□□□ -1.75
OTU1	YFL044C	PRP19	P32523	503 aa	Known RBP	4.09	□□□□□ -1.75
OTU1	YFL044C	TRM2	P33753	639 aa		4.09	□□□□□ -1.75
OTU1	YFL044C	POL12	P38121	705 aa	Predicted RBP	4.09	□□□□□ -1.75
OTU1	YFL044C	UBP13	P38187	747 aa		4.09	□□□□□ -1.75
OTU1	YFL044C	ERC1	P38767	581 aa		4.09	□□□□□ -1.75
OTU1	YFL044C	PIH1	P38768	344 aa		4.09	□□□□□ -1.75
OTU1	YFL044C	RPS14B	P39516	138 aa	Known RBP	4.09	□□□□□ -1.75
OTU1	YFL044C	POL31	P46957	487 aa		4.09	□□□□□ -1.75
OTU1	YFL044C	VPS25	P47142	202 aa		4.09	□□□□□ -1.75
OTU1	YFL044C	PSP1	P50896	841 aa	Known RBP	4.09	□□□□□ -1.75
OTU1	YFL044C	AIM14	P53109	570 aa		4.09	□□□□□ -1.75
OTU1	YFL044C	CUE3	P53137	624 aa	Known RBP	4.09	□□□□□ -1.75
OTU1	YFL044C	TAM41	P53230	385 aa		4.09	□□□□□ -1.75
OTU1	YFL044C	SPC98	P53540	846 aa		4.09	□□□□□ -1.75
OTU1	YFL044C	YDR514C	Q04408	483 aa		4.09	□□□□□ -1.75
OTU1	YFL044C	YML053C	Q04978	212 aa		4.09	□□□□□ -1.75
OTU1	YFL044C	TRE2	Q08693	809 aa		4.09	□□□□□ -1.75
OTU1	YFL044C	RIB2	Q12362	591 aa	Known RBP	4.09	□□□□□ -1.75
OTU1	YFL044C	CTF3	Q12748	733 aa		4.09	□□□□□ -1.75
OTU1	YFL044C	NBL1	Q3E7Y6	73 aa		4.09	□□□□□ -1.75
OTU1	YFL044C	CYC1	P00044	109 aa	Predicted RBP	4.08	□□□□□ -1.76
OTU1	YFL044C	HSP82	P02829	709 aa	Known RBP	4.08	□□□□□ -1.76
OTU1	YFL044C	TUF1	P02992	437 aa	Known RBP	4.08	□□□□□ -1.76
OTU1	YFL044C	TPK1	P06244	397 aa		4.08	□□□□□ -1.76
OTU1	YFL044C	PCK1	P10963	549 aa		4.08	□□□□□ -1.76
OTU1	YFL044C	ENA1	P13587	1091 aa		4.08	□□□□□ -1.76
OTU1	YFL044C	ISY1	P21374	235 aa	Predicted RBP	4.08	□□□□□ -1.76
OTU1	YFL044C	VPS3	P23643	1011 aa		4.08	□□□□□ -1.76
OTU1	YFL044C	MSB2	P32334	1306 aa		4.08	□□□□□ -1.76
OTU1	YFL044C	ECM32	P32644	1121 aa	Known RBP	4.08	□□□□□ -1.76
OTU1	YFL044C	SRP101	P32916	621 aa		4.08	□□□□□ -1.76
OTU1	YFL044C	STO1	P34160	861 aa	Known RBP	4.08	□□□□□ -1.76
OTU1	YFL044C	PCM1	P38628	557 aa	Known RBP	4.08	□□□□□ -1.76
OTU1	YFL044C	YHR054C	P38780	354 aa		4.08	□□□□□ -1.76
OTU1	YFL044C	SFB3	P38810	929 aa		4.08	□□□□□ -1.76
OTU1	YFL044C	CAF16	P43569	289 aa		4.08	□□□□□ -1.76
OTU1	YFL044C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
OTU1	YFL044C	ZAP1	P47043	880 aa		4.08	□□□□□ -1.76
OTU1	YFL044C	STB4	P50104	949 aa		4.08	□□□□□ -1.76
OTU1	YFL044C	ORC5	P50874	479 aa		4.08	□□□□□ -1.76
OTU1	YFL044C	SNO2	P53823	222 aa		4.08	□□□□□ -1.76
OTU1	YFL044C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
OTU1	YFL044C	ENA2	Q01896	1091 aa		4.08	□□□□□ -1.76
OTU1	YFL044C	ATP25	Q03153	612 aa		4.08	□□□□□ -1.76
OTU1	YFL044C	CWC21	Q03375	135 aa	Known RBP	4.08	□□□□□ -1.76
OTU1	YFL044C	YHM2	Q04013	314 aa		4.08	□□□□□ -1.76
OTU1	YFL044C	ADY4	Q05955	493 aa		4.08	□□□□□ -1.76
OTU1	YFL044C	RSC3	Q06639	885 aa		4.08	□□□□□ -1.76
OTU1	YFL044C	REH1	Q06709	432 aa		4.08	□□□□□ -1.76
OTU1	YFL044C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
OTU1	YFL044C	LEA1	Q08963	238 aa	Predicted RBP	4.08	□□□□□ -1.76
OTU1	YFL044C	SGT2	Q12118	346 aa	Known RBP	4.08	□□□□□ -1.76
OTU1	YFL044C	PDH1	Q12428	516 aa	Known RBP	4.08	□□□□□ -1.76
OTU1	YFL044C	ENA5	Q12691	1091 aa		4.08	□□□□□ -1.76
OTU1	YFL044C	DFG16	Q99234	619 aa		4.08	□□□□□ -1.76
OTU1	YFL044C	BRR2	P32639	2163 aa	Known RBP	4.07	□□□□□ -1.76
OTU1	YFL044C	ATP4	P05626	244 aa		4.07	□□□□□ -1.76
OTU1	YFL044C	RNR2	P09938	399 aa	Known RBP	4.07	□□□□□ -1.76
OTU1	YFL044C	SST2	P11972	698 aa	Known RBP	4.07	□□□□□ -1.76
OTU1	YFL044C	PGI1	P12709	554 aa	Known RBP	4.07	□□□□□ -1.76
OTU1	YFL044C	MTF1	P14908	341 aa	Known RBP	4.07	□□□□□ -1.76
OTU1	YFL044C	PDE1	P22434	369 aa		4.07	□□□□□ -1.76
OTU1	YFL044C	SPO11	P23179	398 aa		4.07	□□□□□ -1.76
OTU1	YFL044C	PRR1	P28708	518 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 23 ms