RNA–Protein interactions for RNA: YER123W

YCK3, Transcript of Palmitoylated vacuolar membrane-localized casein kinase I isoform, yeastyeast

Gene YCK3, Length 1,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCK3YER123W OAF3P36023 863 aa2□□□□□ -2.09
YCK3YER123W TYS1P36421 394 aaKnown RBP2□□□□□ -2.09
YCK3YER123W IMD2P38697 523 aaKnown RBP2□□□□□ -2.09
YCK3YER123W HXT6P39003 570 aaKnown RBP2□□□□□ -2.09
YCK3YER123W HXT7P39004 570 aa2□□□□□ -2.09
YCK3YER123W GZF3P42944 551 aaKnown RBP2□□□□□ -2.09
YCK3YER123W HLJ1P48353 224 aa2□□□□□ -2.09
YCK3YER123W IMD3P50095 523 aaKnown RBP2□□□□□ -2.09
YCK3YER123W ECM9Q02202 377 aa2□□□□□ -2.09
YCK3YER123W YHM2Q04013 314 aa2□□□□□ -2.09
YCK3YER123W UTP14Q04500 899 aaKnown RBP2□□□□□ -2.09
YCK3YER123W MRN1Q08925 612 aaKnown RBP RIP-Chip data2□□□□□ -2.09not detected
YCK3YER123W YER175W-AQ8TGU4 54 aa2□□□□□ -2.09
YCK3YER123W YRF1-1P0CX20 1796 aa1.99□□□□□ -2.09
YCK3YER123W YRF1-5P0CX21 1796 aa1.99□□□□□ -2.09
YCK3YER123W YRF1-8P0CX22 1796 aa1.99□□□□□ -2.09
YCK3YER123W TIF3P34167 436 aaKnown RBP1.99□□□□□ -2.09
YCK3YER123W CDS1P38221 457 aa1.99□□□□□ -2.09
YCK3YER123W YHR033WP38690 423 aa1.99□□□□□ -2.09
YCK3YER123W VID28P40547 921 aa1.99□□□□□ -2.09
YCK3YER123W CIN1P40987 1014 aa1.99□□□□□ -2.09
YCK3YER123W PTA1Q01329 785 aaPredicted RBP1.99□□□□□ -2.09
YCK3YER123W DIG1Q03063 452 aaKnown RBP1.99□□□□□ -2.09
YCK3YER123W MTQ2Q03920 221 aaPredicted RBP1.99□□□□□ -2.09
YCK3YER123W YCG1Q06680 1035 aa1.99□□□□□ -2.09
YCK3YER123W THI73Q07904 523 aa1.99□□□□□ -2.09
YCK3YER123W BSC6Q08280 497 aa1.99□□□□□ -2.09
YCK3YER123W GET3Q12154 354 aaKnown RBP1.99□□□□□ -2.09
YCK3YER123W TIP41Q12199 356 aa1.99□□□□□ -2.09
YCK3YER123W APM4Q99186 491 aa1.99□□□□□ -2.09
YCK3YER123W EHT1P38295 451 aa1.98□□□□□ -2.09
YCK3YER123W PCA1P38360 1216 aa1.98□□□□□ -2.09
YCK3YER123W YND1P40009 630 aa1.98□□□□□ -2.09
YCK3YER123W SHE10P53075 577 aa1.98□□□□□ -2.09
YCK3YER123W DNM1P54861 757 aa1.98□□□□□ -2.09
YCK3YER123W ADD37Q03233 198 aa1.98□□□□□ -2.09
YCK3YER123W YTM1Q12024 460 aaPredicted RBP1.98□□□□□ -2.09
YCK3YER123W HFI1Q12060 488 aa1.98□□□□□ -2.09
YCK3YER123W SIN3P22579 1536 aa1.98□□□□□ -2.09
YCK3YER123W NUP145P49687 1317 aa1.98□□□□□ -2.09
YCK3YER123W SGS1P35187 1447 aa1.98□□□□□ -2.09
YCK3YER123W HMG2P12684 1045 aa1.98□□□□□ -2.09
YCK3YER123W CDC26P14724 124 aa1.98□□□□□ -2.09
YCK3YER123W MF(ALPHA)2P32435 120 aa1.98□□□□□ -2.09
YCK3YER123W MTC7P32633 139 aa1.98□□□□□ -2.09
YCK3YER123W DID4P36108 232 aa1.98□□□□□ -2.09
YCK3YER123W FAT1P38225 669 aa1.98□□□□□ -2.09
YCK3YER123W LRO1P40345 661 aa1.98□□□□□ -2.09
YCK3YER123W MNN11P46985 422 aaKnown RBP1.98□□□□□ -2.09
YCK3YER123W PMT3P47190 753 aa1.98□□□□□ -2.09
YCK3YER123W YPT11P48559 417 aa1.98□□□□□ -2.09
YCK3YER123W UME1Q03010 460 aa1.98□□□□□ -2.09
YCK3YER123W ARR3Q06598 404 aa1.98□□□□□ -2.09
YCK3YER123W TY1B-BRQ12193 1756 aa1.97□□□□□ -2.09
YCK3YER123W TY1B-GR3Q12316 1755 aa1.97□□□□□ -2.09
YCK3YER123W TY1B-ORQ92393 1755 aa1.97□□□□□ -2.09
YCK3YER123W TUF1P02992 437 aaKnown RBP1.97□□□□□ -2.09
YCK3YER123W RPS21AP0C0V8 87 aaKnown RBP1.97□□□□□ -2.09
YCK3YER123W NMD2P38798 1089 aaKnown RBP1.97□□□□□ -2.09
YCK3YER123W YDL183CP48569 320 aa1.97□□□□□ -2.09
YCK3YER123W ECM16Q04217 1267 aaKnown RBP1.97□□□□□ -2.09
YCK3YER123W GSH2Q08220 491 aa1.97□□□□□ -2.09
YCK3YER123W DOP1Q03921 1698 aa1.97□□□□□ -2.09
YCK3YER123W YPR117WQ06116 2489 aa1.96□□□□□ -2.1
YCK3YER123W VPS33P20795 691 aa1.96□□□□□ -2.1
YCK3YER123W YJL193WP39542 402 aa1.96□□□□□ -2.1
YCK3YER123W CIR1P42940 261 aa1.96□□□□□ -2.1
YCK3YER123W SQS1P53866 767 aaKnown RBP1.96□□□□□ -2.1
YCK3YER123W YLR352WQ06479 807 aa1.96□□□□□ -2.1
YCK3YER123W CRT10Q08226 957 aa1.96□□□□□ -2.1
YCK3YER123W GPN2Q08726 347 aaPredicted RBP1.96□□□□□ -2.1
YCK3YER123W PFA4Q12006 378 aa1.96□□□□□ -2.1
YCK3YER123W SEC18P18759 758 aaKnown RBP1.95□□□□□ -2.1
YCK3YER123W CNA1P23287 553 aa1.95□□□□□ -2.1
YCK3YER123W DGR2P32330 852 aa1.95□□□□□ -2.1
YCK3YER123W BZZ1P38822 633 aa1.95□□□□□ -2.1
YCK3YER123W RAD26P40352 1085 aa1.95□□□□□ -2.1
YCK3YER123W RNR4P49723 345 aaKnown RBP1.95□□□□□ -2.1
YCK3YER123W CRZ1P53968 678 aa1.95□□□□□ -2.1
YCK3YER123W SND1Q04007 877 aa1.95□□□□□ -2.1
YCK3YER123W FMP42Q04991 504 aa1.95□□□□□ -2.1
YCK3YER123W ECM22Q05958 814 aaPredicted RBP1.95□□□□□ -2.1
YCK3YER123W RRI1Q12468 440 aa1.95□□□□□ -2.1
YCK3YER123W USO1P25386 1790 aa1.95□□□□□ -2.1
YCK3YER123W PCK1P10963 549 aa1.94□□□□□ -2.1
YCK3YER123W SEC12P11655 471 aa1.94□□□□□ -2.1
YCK3YER123W YPK1P12688 680 aaKnown RBP1.94□□□□□ -2.1
YCK3YER123W AEP2P22136 580 aa1.94□□□□□ -2.1
YCK3YER123W HXT4P32467 576 aa1.94□□□□□ -2.1
YCK3YER123W GPP1P41277 250 aaKnown RBP1.94□□□□□ -2.1
YCK3YER123W YJR142WP47173 342 aa1.94□□□□□ -2.1
YCK3YER123W GPG1P53130 126 aa1.94□□□□□ -2.1
YCK3YER123W PEF1P53238 335 aa1.94□□□□□ -2.1
YCK3YER123W MTD1Q02046 320 aaKnown RBP1.94□□□□□ -2.1
YCK3YER123W RAD33Q04231 177 aa1.94□□□□□ -2.1
YCK3YER123W FAP7Q12055 197 aaPredicted RBP1.94□□□□□ -2.1
YCK3YER123W YGR161W-CQ3E744 92 aa1.94□□□□□ -2.1
YCK3YER123W CHD1P32657 1468 aa1.94□□□□□ -2.1
YCK3YER123W BET2P20133 325 aa1.93□□□□□ -2.1
YCK3YER123W DSS4P32601 143 aa1.93□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms