RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W MSS1P32559 526 aaPredicted RBP5.48□□□□□ -1.53
UBC6YER100W PUB1P32588 453 aaKnown RBP RIP-Chip data5.48□□□□□ -1.53not detected
UBC6YER100W DSS4P32601 143 aa5.48□□□□□ -1.53
UBC6YER100W RPS0AP32905 252 aaKnown RBP5.48□□□□□ -1.53
UBC6YER100W ICP55P40051 511 aa5.48□□□□□ -1.53
UBC6YER100W LSM5P40089 93 aaKnown RBP5.48□□□□□ -1.53
UBC6YER100W UBP7P40453 1071 aa5.48□□□□□ -1.53
UBC6YER100W IDS2P46958 469 aa5.48□□□□□ -1.53
UBC6YER100W ZAP1P47043 880 aa5.48□□□□□ -1.53
UBC6YER100W YGR054WP53235 642 aaKnown RBP5.48□□□□□ -1.53
UBC6YER100W NUS1Q12063 375 aa5.48□□□□□ -1.53
UBC6YER100W YOR111WQ99210 232 aa5.48□□□□□ -1.53
UBC6YER100W VCX1Q99385 411 aa5.48□□□□□ -1.53
UBC6YER100W ATP2P00830 511 aaKnown RBP5.47□□□□□ -1.53
UBC6YER100W ARG3P05150 338 aa5.47□□□□□ -1.53
UBC6YER100W TRP4P07285 380 aaPredicted RBP5.47□□□□□ -1.53
UBC6YER100W PDX1P16451 410 aa5.47□□□□□ -1.53
UBC6YER100W PRE8P23639 250 aa5.47□□□□□ -1.53
UBC6YER100W YCR061WP25639 631 aa5.47□□□□□ -1.53
UBC6YER100W CDC60P26637 1090 aaKnown RBP5.47□□□□□ -1.53
UBC6YER100W PRE2P30656 287 aaKnown RBP5.47□□□□□ -1.53
UBC6YER100W NTH1P32356 751 aa5.47□□□□□ -1.53
UBC6YER100W GCD7P32502 381 aaPredicted RBP5.47□□□□□ -1.53
UBC6YER100W GEX2P36173 615 aa5.47□□□□□ -1.53
UBC6YER100W STB5P38699 743 aa5.47□□□□□ -1.53
UBC6YER100W APE4P38821 490 aa5.47□□□□□ -1.53
UBC6YER100W YJL206CP39529 758 aa5.47□□□□□ -1.53
UBC6YER100W BUD16P39988 312 aa5.47□□□□□ -1.53
UBC6YER100W ARB1P40024 610 aaKnown RBP5.47□□□□□ -1.53
UBC6YER100W TMN3P40071 706 aa5.47□□□□□ -1.53
UBC6YER100W RFX1P48743 811 aa5.47□□□□□ -1.53
UBC6YER100W YPL071CQ02864 156 aa5.47□□□□□ -1.53
UBC6YER100W CTI6Q08923 506 aa5.47□□□□□ -1.53
UBC6YER100W RCN2Q12044 265 aa5.47□□□□□ -1.53
UBC6YER100W SIR3P06701 978 aa5.46□□□□□ -1.54
UBC6YER100W ROX1P25042 368 aa5.46□□□□□ -1.54
UBC6YER100W LCB1P25045 558 aaKnown RBP5.46□□□□□ -1.54
UBC6YER100W OCA4P25366 362 aa5.46□□□□□ -1.54
UBC6YER100W BYE1P36106 594 aa5.46□□□□□ -1.54
UBC6YER100W YBR053CP38235 358 aa5.46□□□□□ -1.54
UBC6YER100W SRP72P38688 640 aaKnown RBP5.46□□□□□ -1.54
UBC6YER100W LRP1P38801 184 aaKnown RBP5.46□□□□□ -1.54
UBC6YER100W PSD1P39006 500 aa5.46□□□□□ -1.54
UBC6YER100W MPT5P39016 859 aaKnown RBP RIP-Chip data5.46□□□□□ -1.54not detected
UBC6YER100W DJP1P40564 432 aa5.46□□□□□ -1.54
UBC6YER100W SKP2P42843 763 aa5.46□□□□□ -1.54
UBC6YER100W UBC11P52492 156 aa5.46□□□□□ -1.54
UBC6YER100W REG1Q00816 1014 aa5.46□□□□□ -1.54
UBC6YER100W MTG1Q03151 367 aaPredicted RBP5.46□□□□□ -1.54
UBC6YER100W ATG23Q06671 453 aa5.46□□□□□ -1.54
UBC6YER100W IZH3Q07959 543 aa5.46□□□□□ -1.54
UBC6YER100W ERG27Q12452 347 aaKnown RBP5.46□□□□□ -1.54
UBC6YER100W MET3P08536 511 aa5.45□□□□□ -1.54
UBC6YER100W SUI3P09064 285 aaKnown RBP5.45□□□□□ -1.54
UBC6YER100W ERG8P24521 451 aa5.45□□□□□ -1.54
UBC6YER100W CAD1P24813 409 aaKnown RBP5.45□□□□□ -1.54
UBC6YER100W CAP1P28495 268 aaKnown RBP5.45□□□□□ -1.54
UBC6YER100W YBL029WP38201 376 aa5.45□□□□□ -1.54
UBC6YER100W SPO22P40511 975 aa5.45□□□□□ -1.54
UBC6YER100W MRX6P48564 524 aa5.45□□□□□ -1.54
UBC6YER100W TAM41P53230 385 aa5.45□□□□□ -1.54
UBC6YER100W YGR250CP53316 781 aaKnown RBP5.45□□□□□ -1.54
UBC6YER100W MUB1Q03162 620 aa5.45□□□□□ -1.54
UBC6YER100W DLT1Q04216 342 aa5.45□□□□□ -1.54
UBC6YER100W RGC1Q06108 1083 aaKnown RBP5.45□□□□□ -1.54
UBC6YER100W FRE5Q08908 694 aa5.45□□□□□ -1.54
UBC6YER100W LAS17Q12446 633 aa5.45□□□□□ -1.54
UBC6YER100W YBR255C-AQ3E776 120 aa5.45□□□□□ -1.54
UBC6YER100W CAF20P12962 161 aaKnown RBP5.44□□□□□ -1.54
UBC6YER100W STE11P23561 717 aa5.44□□□□□ -1.54
UBC6YER100W URK1P27515 501 aa5.44□□□□□ -1.54
UBC6YER100W MVD1P32377 396 aaKnown RBP5.44□□□□□ -1.54
UBC6YER100W MTH1P35198 433 aa5.44□□□□□ -1.54
UBC6YER100W CTP1P38152 299 aa5.44□□□□□ -1.54
UBC6YER100W SLZ1P40167 298 aa5.44□□□□□ -1.54
UBC6YER100W YIL161WP40449 235 aaKnown RBP5.44□□□□□ -1.54
UBC6YER100W MPS3P47069 682 aa5.44□□□□□ -1.54
UBC6YER100W MUP1P50276 574 aa5.44□□□□□ -1.54
UBC6YER100W NNF2P53253 936 aa5.44□□□□□ -1.54
UBC6YER100W SSL2Q00578 843 aa5.44□□□□□ -1.54
UBC6YER100W RPT6Q01939 405 aaKnown RBP5.44□□□□□ -1.54
UBC6YER100W NGL2Q03264 515 aaKnown RBP5.44□□□□□ -1.54
UBC6YER100W USA1Q03714 838 aa5.44□□□□□ -1.54
UBC6YER100W GTB1Q04924 702 aa5.44□□□□□ -1.54
UBC6YER100W HOF1Q05080 669 aa5.44□□□□□ -1.54
UBC6YER100W ENT4Q07872 247 aa5.44□□□□□ -1.54
UBC6YER100W PSK2Q08217 1101 aa5.44□□□□□ -1.54
UBC6YER100W TMA16Q08687 178 aa5.44□□□□□ -1.54
UBC6YER100W CIR2Q08822 631 aa5.44□□□□□ -1.54
UBC6YER100W SMC6Q12749 1114 aa5.44□□□□□ -1.54
UBC6YER100W DFG16Q99234 619 aa5.44□□□□□ -1.54
UBC6YER100W SOD2P00447 233 aa5.43□□□□□ -1.54
UBC6YER100W MET17P06106 444 aa5.43□□□□□ -1.54
UBC6YER100W YCK1P23291 538 aa5.43□□□□□ -1.54
UBC6YER100W LRE1P25579 583 aaKnown RBP5.43□□□□□ -1.54
UBC6YER100W MAC1P35192 417 aa5.43□□□□□ -1.54
UBC6YER100W MRPL7P36519 292 aa5.43□□□□□ -1.54
UBC6YER100W SDH8P38345 138 aa5.43□□□□□ -1.54
UBC6YER100W ELO3P40319 345 aa5.43□□□□□ -1.54
UBC6YER100W ECL1P48235 211 aa5.43□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms