RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C IMG2P25642 146 aaPredicted RBP1.42□□□□□ -2.18
SEC3YER008C RAD16P31244 790 aa1.42□□□□□ -2.18
SEC3YER008C PET309P32522 965 aaPredicted RBP1.42□□□□□ -2.18
SEC3YER008C YEL076CP39971 216 aa1.42□□□□□ -2.18
SEC3YER008C LCB2P40970 561 aa1.42□□□□□ -2.18
SEC3YER008C TRS23Q03784 219 aa1.42□□□□□ -2.18
SEC3YER008C HLR1Q04429 423 aa1.42□□□□□ -2.18
SEC3YER008C TSR2Q06672 205 aaKnown RBP1.42□□□□□ -2.18
SEC3YER008C CDA2Q06703 312 aa1.42□□□□□ -2.18
SEC3YER008C HOS1Q12214 470 aa1.42□□□□□ -2.18
SEC3YER008C MDM20Q12387 796 aaKnown RBP1.42□□□□□ -2.18
SEC3YER008C SRB8P25648 1427 aa1.42□□□□□ -2.18
SEC3YER008C CDC16P09798 840 aa1.42□□□□□ -2.18
SEC3YER008C STE12P13574 688 aa1.42□□□□□ -2.18
SEC3YER008C PFK2P16862 959 aaKnown RBP RIP-Chip data1.42□□□□□ -2.18not detected
SEC3YER008C PHO81P17442 1178 aa1.42□□□□□ -2.18
SEC3YER008C BET2P20133 325 aa1.42□□□□□ -2.18
SEC3YER008C SPO11P23179 398 aa1.42□□□□□ -2.18
SEC3YER008C PRP22P24384 1145 aaKnown RBP1.42□□□□□ -2.18
SEC3YER008C CLB4P24871 460 aa1.42□□□□□ -2.18
SEC3YER008C SDS22P36047 338 aa1.42□□□□□ -2.18
SEC3YER008C JNM1P36224 373 aa1.42□□□□□ -2.18
SEC3YER008C PPS1P38148 807 aa1.42□□□□□ -2.18
SEC3YER008C STT3P39007 718 aaKnown RBP1.42□□□□□ -2.18
SEC3YER008C POP2P39008 433 aa1.42□□□□□ -2.18
SEC3YER008C TMN3P40071 706 aa1.42□□□□□ -2.18
SEC3YER008C BTN2P53286 410 aa1.42□□□□□ -2.18
SEC3YER008C RNT1Q02555 471 aa1.42□□□□□ -2.18
SEC3YER008C YPL216WQ08964 1102 aa1.42□□□□□ -2.18
SEC3YER008C DIN7Q12086 430 aa1.42□□□□□ -2.18
SEC3YER008C TAH18Q12181 623 aa1.42□□□□□ -2.18
SEC3YER008C THR1P17423 357 aaKnown RBP1.41□□□□□ -2.18
SEC3YER008C RPC53P25441 422 aa1.41□□□□□ -2.18
SEC3YER008C DPB3P27344 201 aa1.41□□□□□ -2.18
SEC3YER008C YBR225WP38321 900 aa1.41□□□□□ -2.18
SEC3YER008C YER010CP40011 234 aa1.41□□□□□ -2.18
SEC3YER008C GPI8P49018 411 aa1.41□□□□□ -2.18
SEC3YER008C ATP22P50273 684 aaPredicted RBP1.41□□□□□ -2.18
SEC3YER008C CNM67P53865 581 aaKnown RBP1.41□□□□□ -2.18
SEC3YER008C SXM1Q04175 944 aaKnown RBP1.41□□□□□ -2.18
SEC3YER008C ENT4Q07872 247 aa1.41□□□□□ -2.18
SEC3YER008C USV1Q12132 391 aa1.41□□□□□ -2.18
SEC3YER008C NFI1Q12216 726 aa1.41□□□□□ -2.18
SEC3YER008C COX17Q12287 69 aa1.41□□□□□ -2.18
SEC3YER008C RIT1P23796 513 aa1.41□□□□□ -2.18
SEC3YER008C MNE1P24720 663 aa1.41□□□□□ -2.18
SEC3YER008C AAD3P25612 363 aa1.41□□□□□ -2.18
SEC3YER008C CTS1P29029 562 aa1.41□□□□□ -2.18
SEC3YER008C GPI10P30777 616 aa1.41□□□□□ -2.18
SEC3YER008C PPZ2P33329 710 aa1.41□□□□□ -2.18
SEC3YER008C COS111P38308 924 aa1.41□□□□□ -2.18
SEC3YER008C PSF2P40359 213 aa1.41□□□□□ -2.18
SEC3YER008C EFM4P40516 257 aa1.41□□□□□ -2.18
SEC3YER008C DOT5P40553 215 aa1.41□□□□□ -2.18
SEC3YER008C MAD2P40958 196 aa1.41□□□□□ -2.18
SEC3YER008C MTL1P53214 551 aa1.41□□□□□ -2.18
SEC3YER008C TAM41P53230 385 aa1.41□□□□□ -2.18
SEC3YER008C GYL1Q04322 720 aa1.41□□□□□ -2.18
SEC3YER008C SKG3Q06315 1026 aa1.41□□□□□ -2.18
SEC3YER008C YDL086WQ07505 273 aa1.41□□□□□ -2.18
SEC3YER008C CUE5Q08412 411 aaKnown RBP1.41□□□□□ -2.18
SEC3YER008C ARP7Q12406 477 aa1.41□□□□□ -2.18
SEC3YER008C SMC6Q12749 1114 aa1.41□□□□□ -2.18
SEC3YER008C ILS1P09436 1072 aaKnown RBP1.41□□□□□ -2.18
SEC3YER008C HSC82P15108 705 aaKnown RBP1.41□□□□□ -2.18
SEC3YER008C FRS1P15624 595 aaKnown RBP1.41□□□□□ -2.18
SEC3YER008C RRP7P25368 297 aaPredicted RBP1.41□□□□□ -2.18
SEC3YER008C RER1P25560 188 aa1.41□□□□□ -2.18
SEC3YER008C NTH1P32356 751 aa1.41□□□□□ -2.18
SEC3YER008C TRM2P33753 639 aa1.41□□□□□ -2.18
SEC3YER008C SAS3P34218 831 aa1.41□□□□□ -2.18
SEC3YER008C YEL1P34225 687 aa1.41□□□□□ -2.18
SEC3YER008C EHT1P38295 451 aa1.41□□□□□ -2.18
SEC3YER008C LSM5P40089 93 aaKnown RBP1.41□□□□□ -2.18
SEC3YER008C SAE2P46946 345 aa1.41□□□□□ -2.18
SEC3YER008C MSE1P48525 536 aa1.41□□□□□ -2.18
SEC3YER008C AMA1P50082 593 aa1.41□□□□□ -2.18
SEC3YER008C PSP1P50896 841 aaKnown RBP1.41□□□□□ -2.18
SEC3YER008C SGF73P53165 657 aa1.41□□□□□ -2.18
SEC3YER008C NMA2P53204 395 aa1.41□□□□□ -2.18
SEC3YER008C SPO1P53541 631 aa1.41□□□□□ -2.18
SEC3YER008C YLR287CQ05881 355 aa1.41□□□□□ -2.18
SEC3YER008C KEL3Q08979 651 aaPredicted RBP1.41□□□□□ -2.18
SEC3YER008C DBP10Q12389 995 aaKnown RBP1.41□□□□□ -2.18
SEC3YER008C MLP1Q02455 1875 aaKnown RBP1.4□□□□□ -2.18
SEC3YER008C PRP6P19735 899 aaPredicted RBP1.4□□□□□ -2.18
SEC3YER008C PRE10P21242 288 aaKnown RBP RIP-Chip data1.4□□□□□ -2.18not detected
SEC3YER008C ADE2P21264 571 aaKnown RBP1.4□□□□□ -2.18
SEC3YER008C ERG6P25087 383 aaKnown RBP1.4□□□□□ -2.18
SEC3YER008C DMC1P25453 334 aa1.4□□□□□ -2.18
SEC3YER008C PGS1P25578 521 aa1.4□□□□□ -2.18
SEC3YER008C SWC3P31376 625 aa1.4□□□□□ -2.18
SEC3YER008C ARG2P40360 574 aa1.4□□□□□ -2.18
SEC3YER008C MAF1P41910 395 aa1.4□□□□□ -2.18
SEC3YER008C IRC5P43610 853 aa1.4□□□□□ -2.18
SEC3YER008C TEX1P53851 422 aaKnown RBP1.4□□□□□ -2.18
SEC3YER008C NOP15P53927 220 aaPredicted RBP1.4□□□□□ -2.18
SEC3YER008C TIM50Q02776 476 aa1.4□□□□□ -2.18
SEC3YER008C DUS4Q06063 367 aa1.4□□□□□ -2.18
SEC3YER008C VPS36Q06696 566 aa1.4□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms