RNA–Protein interactions for RNA: YER006W

NUG1, Transcript of GTPase that associates with nuclear 60S pre-ribosomes, yeast

Gene NUG1, Length 1,563 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUG1	YER006W	YIL177C	P40434	1758 aa		4.25	□□□□□ -1.73
NUG1	YER006W	YJL225C	P40889	1758 aa		4.25	□□□□□ -1.73
NUG1	YER006W	IPP1	P00817	287 aa	Known RBP	4.25	□□□□□ -1.73
NUG1	YER006W	STF1	P01098	86 aa		4.25	□□□□□ -1.73
NUG1	YER006W	RAD1	P06777	1100 aa		4.25	□□□□□ -1.73
NUG1	YER006W	MPH2	P0CD99	609 aa		4.25	□□□□□ -1.73
NUG1	YER006W	CKA2	P19454	339 aa		4.25	□□□□□ -1.73
NUG1	YER006W	OSM1	P21375	501 aa	Known RBP	4.25	□□□□□ -1.73
NUG1	YER006W	CNA1	P23287	553 aa		4.25	□□□□□ -1.73
NUG1	YER006W	DPB2	P24482	689 aa	Predicted RBP	4.25	□□□□□ -1.73
NUG1	YER006W	RVS161	P25343	265 aa	Known RBP	4.25	□□□□□ -1.73
NUG1	YER006W	SRP40	P32583	406 aa	Predicted RBP	4.25	□□□□□ -1.73
NUG1	YER006W	YKU70	P32807	602 aa		4.25	□□□□□ -1.73
NUG1	YER006W	RPT1	P33299	467 aa	Known RBP	4.25	□□□□□ -1.73
NUG1	YER006W	MTC2	P34246	357 aa		4.25	□□□□□ -1.73
NUG1	YER006W	YPT52	P36018	234 aa	Known RBP	4.25	□□□□□ -1.73
NUG1	YER006W	ECM2	P38241	364 aa	Known RBP	4.25	□□□□□ -1.73
NUG1	YER006W	YMR262W	P38430	313 aa		4.25	□□□□□ -1.73
NUG1	YER006W	RCK2	P38623	610 aa		4.25	□□□□□ -1.73
NUG1	YER006W	DSS1	P39112	969 aa		4.25	□□□□□ -1.73
NUG1	YER006W	MRX1	P40050	688 aa		4.25	□□□□□ -1.73
NUG1	YER006W	JEM1	P40358	645 aa		4.25	□□□□□ -1.73
NUG1	YER006W	MKT1	P40850	830 aa	Known RBP	4.25	□□□□□ -1.73
NUG1	YER006W	LSM1	P47017	172 aa	Known RBP	4.25	□□□□□ -1.73
NUG1	YER006W	COX16	P47081	118 aa		4.25	□□□□□ -1.73
NUG1	YER006W	POL32	P47110	350 aa		4.25	□□□□□ -1.73
NUG1	YER006W	YJR079W	P47126	109 aa		4.25	□□□□□ -1.73
NUG1	YER006W	BRO1	P48582	844 aa		4.25	□□□□□ -1.73
NUG1	YER006W	SAP4	P53036	818 aa		4.25	□□□□□ -1.73
NUG1	YER006W	MAL11	P53048	616 aa		4.25	□□□□□ -1.73
NUG1	YER006W	COG2	P53271	262 aa		4.25	□□□□□ -1.73
NUG1	YER006W	RBG2	P53295	368 aa	Known RBP	4.25	□□□□□ -1.73
NUG1	YER006W	GOR1	P53839	350 aa		4.25	□□□□□ -1.73
NUG1	YER006W	RPL34A	P87262	121 aa	Predicted RBP	4.25	□□□□□ -1.73
NUG1	YER006W	SEN54	Q02825	467 aa	Predicted RBP	4.25	□□□□□ -1.73
NUG1	YER006W	ABZ2	Q03266	374 aa		4.25	□□□□□ -1.73
NUG1	YER006W	RSM24	Q03976	319 aa		4.25	□□□□□ -1.73
NUG1	YER006W	HFD1	Q04458	532 aa		4.25	□□□□□ -1.73
NUG1	YER006W	SPC24	Q04477	213 aa		4.25	□□□□□ -1.73
NUG1	YER006W	YDR286C	Q05530	114 aa		4.25	□□□□□ -1.73
NUG1	YER006W	HRQ1	Q05549	1077 aa		4.25	□□□□□ -1.73
NUG1	YER006W	SPO77	Q06134	477 aa		4.25	□□□□□ -1.73
NUG1	YER006W	NDE2	Q07500	545 aa		4.25	□□□□□ -1.73
NUG1	YER006W	SNU23	Q12368	194 aa	Predicted RBP	4.25	□□□□□ -1.73
NUG1	YER006W	YOR131C	Q12486	218 aa		4.25	□□□□□ -1.73
NUG1	YER006W	ARP6	Q12509	438 aa		4.25	□□□□□ -1.73
NUG1	YER006W	ADF1	Q2V2Q1	113 aa		4.25	□□□□□ -1.73
NUG1	YER006W	CMD1	P06787	147 aa	Known RBP	4.24	□□□□□ -1.73
NUG1	YER006W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
NUG1	YER006W	HSP60	P19882	572 aa	Known RBP	4.24	□□□□□ -1.73
NUG1	YER006W	IME1	P21190	360 aa		4.24	□□□□□ -1.73
NUG1	YER006W	ADE2	P21264	571 aa	Known RBP	4.24	□□□□□ -1.73
NUG1	YER006W	KRE2	P27809	442 aa		4.24	□□□□□ -1.73
NUG1	YER006W	ICL1	P28240	557 aa	Predicted RBP	4.24	□□□□□ -1.73
NUG1	YER006W	DOA4	P32571	926 aa		4.24	□□□□□ -1.73
NUG1	YER006W	DOM34	P33309	386 aa		4.24	□□□□□ -1.73
NUG1	YER006W	CNS1	P33313	385 aa		4.24	□□□□□ -1.73
NUG1	YER006W	MOT2	P34909	587 aa	Known RBP	4.24	□□□□□ -1.73
NUG1	YER006W	MYO3	P36006	1272 aa		4.24	□□□□□ -1.73
NUG1	YER006W	SPP381	P38282	291 aa	Predicted RBP	4.24	□□□□□ -1.73
NUG1	YER006W	MSR1	P38714	643 aa		4.24	□□□□□ -1.73
NUG1	YER006W	AIM10	P39965	576 aa	Known RBP	4.24	□□□□□ -1.73
NUG1	YER006W	CCT5	P40413	562 aa	Known RBP	4.24	□□□□□ -1.73
NUG1	YER006W	QDR1	P40475	563 aa		4.24	□□□□□ -1.73
NUG1	YER006W	YIL077C	P40508	320 aa		4.24	□□□□□ -1.73
NUG1	YER006W	AGE2	P40529	298 aa		4.24	□□□□□ -1.73
NUG1	YER006W	MDJ2	P42834	146 aa		4.24	□□□□□ -1.73
NUG1	YER006W	SAE2	P46946	345 aa		4.24	□□□□□ -1.73
NUG1	YER006W	SIW14	P53965	281 aa		4.24	□□□□□ -1.73
NUG1	YER006W	SDH1	Q00711	640 aa		4.24	□□□□□ -1.73
NUG1	YER006W	RSC4	Q02206	625 aa		4.24	□□□□□ -1.73
NUG1	YER006W	SLU7	Q02775	382 aa	Known RBP	4.24	□□□□□ -1.73
NUG1	YER006W	YPL109C	Q02981	657 aa		4.24	□□□□□ -1.73
NUG1	YER006W	MMT1	Q03218	510 aa		4.24	□□□□□ -1.73
NUG1	YER006W	BUL2	Q03758	920 aa	Known RBP	4.24	□□□□□ -1.73
NUG1	YER006W	RPN9	Q04062	393 aa	Known RBP	4.24	□□□□□ -1.73
NUG1	YER006W	YMR114C	Q04471	368 aa	Known RBP	4.24	□□□□□ -1.73
NUG1	YER006W	COX20	Q04935	205 aa		4.24	□□□□□ -1.73
NUG1	YER006W	YCS4	Q06156	1176 aa		4.24	□□□□□ -1.73
NUG1	YER006W	NOP6	Q07623	225 aa	Known RBP	4.24	□□□□□ -1.73
NUG1	YER006W	ESC8	Q08119	714 aa		4.24	□□□□□ -1.73
NUG1	YER006W	SMC5	Q08204	1093 aa		4.24	□□□□□ -1.73
NUG1	YER006W	LAP2	Q10740	671 aa		4.24	□□□□□ -1.73
NUG1	YER006W	THP3	Q12049	470 aa	Known RBP	4.24	□□□□□ -1.73
NUG1	YER006W	HAT1	Q12341	374 aa		4.24	□□□□□ -1.73
NUG1	YER006W	ARP7	Q12406	477 aa		4.24	□□□□□ -1.73
NUG1	YER006W	NSI1	Q12457	570 aa		4.24	□□□□□ -1.73
NUG1	YER006W	GSC2	P40989	1895 aa		4.24	□□□□□ -1.73
NUG1	YER006W	VPS13	Q07878	3144 aa		4.23	□□□□□ -1.73
NUG1	YER006W	SNF1	P06782	633 aa	Known RBP	4.23	□□□□□ -1.73
NUG1	YER006W	LAT1	P12695	482 aa	Known RBP	4.23	□□□□□ -1.73
NUG1	YER006W	SEC63	P14906	663 aa		4.23	□□□□□ -1.73
NUG1	YER006W	VMA2	P16140	517 aa	Known RBP	4.23	□□□□□ -1.73
NUG1	YER006W	KAR2	P16474	682 aa	Known RBP	4.23	□□□□□ -1.73
NUG1	YER006W	URA4	P20051	364 aa		4.23	□□□□□ -1.73
NUG1	YER006W	REC107	P21651	314 aa		4.23	□□□□□ -1.73
NUG1	YER006W	UBC1	P21734	215 aa	Known RBP	4.23	□□□□□ -1.73
NUG1	YER006W	TRX1	P22217	103 aa	Known RBP	4.23	□□□□□ -1.73
NUG1	YER006W	EFT1	P32324	842 aa	Known RBP	4.23	□□□□□ -1.73
NUG1	YER006W	CUE2	P36075	443 aa	Known RBP	4.23	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 12 ms