RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP42YDR192C TAF1P46677 1066 aa5.16□□□□□ -1.58
NUP42YDR192C MPS3P47069 682 aa5.16□□□□□ -1.58
NUP42YDR192C RFX1P48743 811 aa5.16□□□□□ -1.58
NUP42YDR192C UBA2P52488 636 aa5.16□□□□□ -1.58
NUP42YDR192C YNR071CP53757 342 aa5.16□□□□□ -1.58
NUP42YDR192C CEG1Q01159 459 aaPredicted RBP5.16□□□□□ -1.58
NUP42YDR192C KIN4Q01919 800 aa5.16□□□□□ -1.58
NUP42YDR192C VPS64Q03944 604 aa5.16□□□□□ -1.58
NUP42YDR192C YSH1Q06224 779 aaPredicted RBP5.16□□□□□ -1.58
NUP42YDR192C BUG1Q12191 341 aa5.16□□□□□ -1.58
NUP42YDR192C SNU66Q12420 587 aaPredicted RBP5.16□□□□□ -1.58
NUP42YDR192C RAD50P12753 1312 aa5.16□□□□□ -1.58
NUP42YDR192C PIF1P07271 859 aa5.15□□□□□ -1.59
NUP42YDR192C CBP3P21560 335 aa5.15□□□□□ -1.59
NUP42YDR192C GCD7P32502 381 aaPredicted RBP5.15□□□□□ -1.59
NUP42YDR192C RMA1P36001 430 aaKnown RBP5.15□□□□□ -1.59
NUP42YDR192C PPS1P38148 807 aa5.15□□□□□ -1.59
NUP42YDR192C CDS1P38221 457 aa5.15□□□□□ -1.59
NUP42YDR192C PMC1P38929 1173 aaPredicted RBP5.15□□□□□ -1.59
NUP42YDR192C SWD1P39706 426 aa5.15□□□□□ -1.59
NUP42YDR192C ACA1P39970 489 aa5.15□□□□□ -1.59
NUP42YDR192C ARG2P40360 574 aa5.15□□□□□ -1.59
NUP42YDR192C EAF7P53911 425 aaKnown RBP5.15□□□□□ -1.59
NUP42YDR192C BRE1Q07457 700 aaKnown RBP5.15□□□□□ -1.59
NUP42YDR192C RTK1Q12100 620 aaPredicted RBP5.15□□□□□ -1.59
NUP42YDR192C ACF2Q12168 779 aa5.15□□□□□ -1.59
NUP42YDR192C TUP1P16649 713 aa5.14□□□□□ -1.59
NUP42YDR192C THR1P17423 357 aaKnown RBP5.14□□□□□ -1.59
NUP42YDR192C FUI1P38196 639 aa5.14□□□□□ -1.59
NUP42YDR192C YGR021WP53212 290 aa5.14□□□□□ -1.59
NUP42YDR192C ATG4P53867 494 aa5.14□□□□□ -1.59
NUP42YDR192C CRD1Q07560 283 aa5.14□□□□□ -1.59
NUP42YDR192C HBT1Q07653 1046 aaKnown RBP5.14□□□□□ -1.59
NUP42YDR192C PUS9Q12069 462 aa5.14□□□□□ -1.59
NUP42YDR192C DIN7Q12086 430 aa5.14□□□□□ -1.59
NUP42YDR192C DBP10Q12389 995 aaKnown RBP5.14□□□□□ -1.59
NUP42YDR192C LPD1P09624 499 aaKnown RBP5.13□□□□□ -1.59
NUP42YDR192C CDC16P09798 840 aa5.13□□□□□ -1.59
NUP42YDR192C FUB1P25659 250 aa5.13□□□□□ -1.59
NUP42YDR192C RAD24P32641 659 aa5.13□□□□□ -1.59
NUP42YDR192C APL3P38065 1025 aa5.13□□□□□ -1.59
NUP42YDR192C YJL193WP39542 402 aa5.13□□□□□ -1.59
NUP42YDR192C IES5P40060 125 aa5.13□□□□□ -1.59
NUP42YDR192C TMN3P40071 706 aa5.13□□□□□ -1.59
NUP42YDR192C KHA1P40309 873 aa5.13□□□□□ -1.59
NUP42YDR192C FAF1P40546 346 aaPredicted RBP5.13□□□□□ -1.59
NUP42YDR192C YDL183CP48569 320 aa5.13□□□□□ -1.59
NUP42YDR192C MLC1P53141 149 aa5.13□□□□□ -1.59
NUP42YDR192C SUB1P54000 292 aaKnown RBP5.13□□□□□ -1.59
NUP42YDR192C YDL086WQ07505 273 aa5.13□□□□□ -1.59
NUP42YDR192C IZH3Q07959 543 aa5.13□□□□□ -1.59
NUP42YDR192C URA3P03962 267 aa5.12□□□□□ -1.59
NUP42YDR192C ADH4P10127 382 aa5.12□□□□□ -1.59
NUP42YDR192C VPS33P20795 691 aa5.12□□□□□ -1.59
NUP42YDR192C MSM1P22438 575 aa5.12□□□□□ -1.59
NUP42YDR192C ARG1P22768 420 aa5.12□□□□□ -1.59
NUP42YDR192C MSS1P32559 526 aaPredicted RBP5.12□□□□□ -1.59
NUP42YDR192C APM3P38153 483 aa5.12□□□□□ -1.59
NUP42YDR192C PPE1P38796 400 aa5.12□□□□□ -1.59
NUP42YDR192C LRO1P40345 661 aa5.12□□□□□ -1.59
NUP42YDR192C SAP185P40856 1058 aa5.12□□□□□ -1.59
NUP42YDR192C THI6P41835 540 aa5.12□□□□□ -1.59
NUP42YDR192C YGR054WP53235 642 aaKnown RBP5.12□□□□□ -1.59
NUP42YDR192C YGR151CP53287 111 aa5.12□□□□□ -1.59
NUP42YDR192C SUN4P53616 420 aa5.12□□□□□ -1.59
NUP42YDR192C DAK1P54838 584 aaKnown RBP5.12□□□□□ -1.59
NUP42YDR192C SMX3P54999 86 aaPredicted RBP5.12□□□□□ -1.59
NUP42YDR192C NKP2Q06162 153 aa5.12□□□□□ -1.59
NUP42YDR192C MLH3Q12083 715 aa5.12□□□□□ -1.59
NUP42YDR192C USV1Q12132 391 aa5.12□□□□□ -1.59
NUP42YDR192C SSK22P25390 1331 aaPredicted RBP5.12□□□□□ -1.59
NUP42YDR192C MIS1P09440 975 aaKnown RBP5.11□□□□□ -1.59
NUP42YDR192C CAP1P28495 268 aaKnown RBP5.11□□□□□ -1.59
NUP42YDR192C CBR1P38626 284 aaKnown RBP5.11□□□□□ -1.59
NUP42YDR192C OSH3P38713 996 aaKnown RBP5.11□□□□□ -1.59
NUP42YDR192C PCL5P38794 229 aa5.11□□□□□ -1.59
NUP42YDR192C NDC80P40460 691 aa5.11□□□□□ -1.59
NUP42YDR192C GSM1P42950 618 aa5.11□□□□□ -1.59
NUP42YDR192C CTR1P49573 406 aa5.11□□□□□ -1.59
NUP42YDR192C YGL082WP53155 381 aa5.11□□□□□ -1.59
NUP42YDR192C ZDS2P54786 942 aa5.11□□□□□ -1.59
NUP42YDR192C EIS1Q05050 843 aaKnown RBP5.11□□□□□ -1.59
NUP42YDR192C RGC1Q06108 1083 aaKnown RBP5.11□□□□□ -1.59
NUP42YDR192C AAD4Q07747 329 aa5.11□□□□□ -1.59
NUP42YDR192C SWI1P09547 1314 aa5.11□□□□□ -1.59
NUP42YDR192C PHO5P00635 467 aa5.1□□□□□ -1.59
NUP42YDR192C TRX2P22803 104 aaKnown RBP5.1□□□□□ -1.59
NUP42YDR192C EHT1P38295 451 aa5.1□□□□□ -1.59
NUP42YDR192C CHS7P38843 316 aa5.1□□□□□ -1.59
NUP42YDR192C IMA5P40884 581 aa5.1□□□□□ -1.59
NUP42YDR192C MAD3P47074 515 aa5.1□□□□□ -1.59
NUP42YDR192C YGL242CP53066 181 aa5.1□□□□□ -1.59
NUP42YDR192C PDR18P53756 1333 aa5.1□□□□□ -1.59
NUP42YDR192C TIM50Q02776 476 aa5.1□□□□□ -1.59
NUP42YDR192C UFO1Q04511 668 aa5.1□□□□□ -1.59
NUP42YDR192C BLS1Q06071 122 aa5.1□□□□□ -1.59
NUP42YDR192C MCH5Q08777 521 aa5.1□□□□□ -1.59
NUP42YDR192C CTT1P06115 562 aa5.09□□□□□ -1.59
NUP42YDR192C PCK1P10963 549 aa5.09□□□□□ -1.59
NUP42YDR192C SIR1P21691 654 aa5.09□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 432.2 ms