RNA–Protein interactions for RNA: YDR034C-D

YDR034C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YDR034C-D, Length 5,313 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR034C-D	YDR034C-D	PRS5	Q12265	496 aa	Known RBP	3.14	□□□□□ -1.91
YDR034C-D	YDR034C-D	FRE6	Q12473	712 aa		3.14	□□□□□ -1.91
YDR034C-D	YDR034C-D	HRP1	Q99383	534 aa	Known RBP	3.14	□□□□□ -1.91
YDR034C-D	YDR034C-D	COQ4	O13525	335 aa		3.14	□□□□□ -1.91
YDR034C-D	YDR034C-D	RSC6	P25632	483 aa		3.14	□□□□□ -1.91
YDR034C-D	YDR034C-D	DBF4	P32325	704 aa		3.14	□□□□□ -1.91
YDR034C-D	YDR034C-D	MSS1	P32559	526 aa	Predicted RBP	3.14	□□□□□ -1.91
YDR034C-D	YDR034C-D	CNS1	P33313	385 aa		3.14	□□□□□ -1.91
YDR034C-D	YDR034C-D	THI2	P38141	450 aa		3.14	□□□□□ -1.91
YDR034C-D	YDR034C-D	ALG14	P38242	237 aa		3.14	□□□□□ -1.91
YDR034C-D	YDR034C-D	OYE3	P41816	400 aa	Predicted RBP	3.14	□□□□□ -1.91
YDR034C-D	YDR034C-D	COS12	P53053	380 aa		3.14	□□□□□ -1.91
YDR034C-D	YDR034C-D	SNF12	P53628	566 aa		3.14	□□□□□ -1.91
YDR034C-D	YDR034C-D	TOF1	P53840	1238 aa		3.14	□□□□□ -1.91
YDR034C-D	YDR034C-D	REG1	Q00816	1014 aa		3.14	□□□□□ -1.91
YDR034C-D	YDR034C-D	RSF1	Q05043	376 aa		3.14	□□□□□ -1.91
YDR034C-D	YDR034C-D	CLB1	P24868	471 aa		3.13	□□□□□ -1.91
YDR034C-D	YDR034C-D	PRE2	P30656	287 aa	Known RBP	3.13	□□□□□ -1.91
YDR034C-D	YDR034C-D	YHR033W	P38690	423 aa		3.13	□□□□□ -1.91
YDR034C-D	YDR034C-D	STB5	P38699	743 aa		3.13	□□□□□ -1.91
YDR034C-D	YDR034C-D	YHL012W	P38709	493 aa		3.13	□□□□□ -1.91
YDR034C-D	YDR034C-D	YHR078W	P38799	552 aa		3.13	□□□□□ -1.91
YDR034C-D	YDR034C-D	ERV25	P54837	211 aa	Known RBP	3.13	□□□□□ -1.91
YDR034C-D	YDR034C-D	RIX7	Q07844	837 aa	Known RBP	3.13	□□□□□ -1.91
YDR034C-D	YDR034C-D	DBP3	P20447	523 aa	Known RBP	3.13	□□□□□ -1.91
YDR034C-D	YDR034C-D	CAB2	P40506	365 aa		3.13	□□□□□ -1.91
YDR034C-D	YDR034C-D	EFM4	P40516	257 aa		3.13	□□□□□ -1.91
YDR034C-D	YDR034C-D	ALF1	P53904	254 aa		3.13	□□□□□ -1.91
YDR034C-D	YDR034C-D	YAP6	Q03935	383 aa		3.13	□□□□□ -1.91
YDR034C-D	YDR034C-D	AIM32	Q04689	311 aa		3.13	□□□□□ -1.91
YDR034C-D	YDR034C-D	STP3	Q05937	343 aa		3.13	□□□□□ -1.91
YDR034C-D	YDR034C-D	YBR126W-A	Q8TGU7	68 aa		3.13	□□□□□ -1.91
YDR034C-D	YDR034C-D	TUP1	P16649	713 aa		3.13	□□□□□ -1.91
YDR034C-D	YDR034C-D	YKR075C	P36155	307 aa		3.13	□□□□□ -1.91
YDR034C-D	YDR034C-D	PCH2	P38126	564 aa		3.13	□□□□□ -1.91
YDR034C-D	YDR034C-D	SAK1	P38990	1142 aa		3.13	□□□□□ -1.91
YDR034C-D	YDR034C-D	MSS4	P38994	779 aa		3.13	□□□□□ -1.91
YDR034C-D	YDR034C-D	UME6	P39001	836 aa		3.13	□□□□□ -1.91
YDR034C-D	YDR034C-D	ARB1	P40024	610 aa	Known RBP	3.13	□□□□□ -1.91
YDR034C-D	YDR034C-D	SCW11	P53189	542 aa		3.13	□□□□□ -1.91
YDR034C-D	YDR034C-D	YNR068C	P53754	272 aa		3.13	□□□□□ -1.91
YDR034C-D	YDR034C-D	FCP1	Q03254	732 aa		3.13	□□□□□ -1.91
YDR034C-D	YDR034C-D	YDR341C	Q05506	607 aa	Known RBP	3.13	□□□□□ -1.91
YDR034C-D	YDR034C-D	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	3.13	□□□□□ -1.91	not detected
YDR034C-D	YDR034C-D	GAS5	Q08193	484 aa		3.13	□□□□□ -1.91
YDR034C-D	YDR034C-D	SKM1	Q12469	655 aa		3.13	□□□□□ -1.91
YDR034C-D	YDR034C-D	OCA4	P25366	362 aa		3.13	□□□□□ -1.91
YDR034C-D	YDR034C-D	SKG3	Q06315	1026 aa		3.13	□□□□□ -1.91
YDR034C-D	YDR034C-D	NOP58	Q12499	511 aa	Known RBP	3.13	□□□□□ -1.91
YDR034C-D	YDR034C-D	SEC53	P07283	254 aa	Known RBP	3.12	□□□□□ -1.91
YDR034C-D	YDR034C-D	RFC1	P38630	861 aa	Known RBP	3.12	□□□□□ -1.91
YDR034C-D	YDR034C-D	FOL2	P51601	243 aa	Known RBP	3.12	□□□□□ -1.91
YDR034C-D	YDR034C-D	TEL2	P53038	688 aa		3.12	□□□□□ -1.91
YDR034C-D	YDR034C-D	CIK1	Q01649	594 aa		3.12	□□□□□ -1.91
YDR034C-D	YDR034C-D	MRD1	Q06106	887 aa	Known RBP	3.12	□□□□□ -1.91
YDR034C-D	YDR034C-D	PPQ1	P32945	549 aa		3.12	□□□□□ -1.91
YDR034C-D	YDR034C-D	LAS1	P36146	502 aa	Predicted RBP	3.12	□□□□□ -1.91
YDR034C-D	YDR034C-D	SLZ1	P40167	298 aa		3.12	□□□□□ -1.91
YDR034C-D	YDR034C-D	PXA1	P41909	870 aa		3.12	□□□□□ -1.91
YDR034C-D	YDR034C-D	SOV1	Q04748	898 aa		3.12	□□□□□ -1.91
YDR034C-D	YDR034C-D	ALY1	P36117	915 aa		3.12	□□□□□ -1.91
YDR034C-D	YDR034C-D	PRP43	P53131	767 aa	Known RBP	3.12	□□□□□ -1.91
YDR034C-D	YDR034C-D	MCM21	Q06675	368 aa		3.12	□□□□□ -1.91
YDR034C-D	YDR034C-D	FMP45	Q07651	309 aa		3.12	□□□□□ -1.91
YDR034C-D	YDR034C-D	TUF1	P02992	437 aa	Known RBP	3.12	□□□□□ -1.91
YDR034C-D	YDR034C-D	CDC6	P09119	513 aa		3.12	□□□□□ -1.91
YDR034C-D	YDR034C-D	PRE10	P21242	288 aa	Known RBP RIP-Chip data	3.12	□□□□□ -1.91	not detected
YDR034C-D	YDR034C-D	RTS1	P38903	757 aa		3.12	□□□□□ -1.91
YDR034C-D	YDR034C-D	DJP1	P40564	432 aa		3.12	□□□□□ -1.91
YDR034C-D	YDR034C-D	THI22	Q06490	572 aa		3.12	□□□□□ -1.91
YDR034C-D	YDR034C-D	YPT6	Q99260	215 aa		3.12	□□□□□ -1.91
YDR034C-D	YDR034C-D	RNR1	P21524	888 aa	Known RBP	3.12	□□□□□ -1.91
YDR034C-D	YDR034C-D	RPS7A	P26786	190 aa	Known RBP	3.12	□□□□□ -1.91
YDR034C-D	YDR034C-D	RRM3	P38766	723 aa		3.12	□□□□□ -1.91
YDR034C-D	YDR034C-D	ACO2	P39533	789 aa		3.12	□□□□□ -1.91
YDR034C-D	YDR034C-D	TMA16	Q08687	178 aa		3.12	□□□□□ -1.91
YDR034C-D	YDR034C-D	YOR111W	Q99210	232 aa		3.12	□□□□□ -1.91
YDR034C-D	YDR034C-D	GYP6	P32806	458 aa		3.11	□□□□□ -1.91
YDR034C-D	YDR034C-D	IST3	P40565	148 aa	Predicted RBP	3.11	□□□□□ -1.91
YDR034C-D	YDR034C-D	BUD27	P43573	796 aa	Known RBP RIP-Chip data	3.11	□□□□□ -1.91	not detected
YDR034C-D	YDR034C-D	GLO1	P50107	326 aa		3.11	□□□□□ -1.91
YDR034C-D	YDR034C-D	RBS1	Q05672	457 aa	Known RBP	3.11	□□□□□ -1.91
YDR034C-D	YDR034C-D	YLH47	Q06493	454 aa		3.11	□□□□□ -1.91
YDR034C-D	YDR034C-D	YEH1	Q07804	573 aa		3.11	□□□□□ -1.91
YDR034C-D	YDR034C-D	SPE1	P08432	466 aa		3.11	□□□□□ -1.91
YDR034C-D	YDR034C-D	YML003W	P0CF16	290 aa		3.11	□□□□□ -1.91
YDR034C-D	YDR034C-D	BUD14	P27637	709 aa		3.11	□□□□□ -1.91
YDR034C-D	YDR034C-D	ERV1	P27882	189 aa		3.11	□□□□□ -1.91
YDR034C-D	YDR034C-D	RFC5	P38251	354 aa		3.11	□□□□□ -1.91
YDR034C-D	YDR034C-D	JHD1	P40034	492 aa		3.11	□□□□□ -1.91
YDR034C-D	YDR034C-D	MND2	P40577	368 aa		3.11	□□□□□ -1.91
YDR034C-D	YDR034C-D	PSP2	P50109	593 aa	Known RBP	3.11	□□□□□ -1.91
YDR034C-D	YDR034C-D	YGL036W	P53185	909 aa	Predicted RBP	3.11	□□□□□ -1.91
YDR034C-D	YDR034C-D	HOS1	Q12214	470 aa		3.11	□□□□□ -1.91
YDR034C-D	YDR034C-D	GPM3	Q12326	303 aa		3.11	□□□□□ -1.91
YDR034C-D	YDR034C-D	ISA2	Q12425	185 aa		3.11	□□□□□ -1.91
YDR034C-D	YDR034C-D	VPS33	P20795	691 aa		3.11	□□□□□ -1.91
YDR034C-D	YDR034C-D	SPC110	P32380	944 aa		3.11	□□□□□ -1.91
YDR034C-D	YDR034C-D	CEM1	P39525	442 aa		3.11	□□□□□ -1.91
YDR034C-D	YDR034C-D	VFA1	P40080	203 aa		3.11	□□□□□ -1.91

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