RNA–Protein interactions for RNA: YDL205C

HEM3, Transcript of Porphobilinogen deaminase, yeast

Gene HEM3, Length 984 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HEM3	YDL205C	YLR225C	Q05948	407 aa	Known RBP	5.76	□□□□□ -1.49
HEM3	YDL205C	YDL057W	Q07379	328 aa		5.76	□□□□□ -1.49
HEM3	YDL205C	CDC33	P07260	213 aa	Known RBP	5.75	□□□□□ -1.49
HEM3	YDL205C	SRD1	P09007	221 aa		5.75	□□□□□ -1.49
HEM3	YDL205C	PMS1	P14242	873 aa		5.75	□□□□□ -1.49
HEM3	YDL205C	TAL1	P15019	335 aa	Known RBP	5.75	□□□□□ -1.49
HEM3	YDL205C	SFL1	P20134	766 aa		5.75	□□□□□ -1.49
HEM3	YDL205C	YKL023W	P36103	277 aa	Known RBP	5.75	□□□□□ -1.49
HEM3	YDL205C	CST26	P38226	397 aa		5.75	□□□□□ -1.49
HEM3	YDL205C	VHC1	P38329	1120 aa		5.75	□□□□□ -1.49
HEM3	YDL205C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	5.75	□□□□□ -1.49	not detected
HEM3	YDL205C	YTA12	P40341	825 aa		5.75	□□□□□ -1.49
HEM3	YDL205C	FAA4	P47912	694 aa	Known RBP	5.75	□□□□□ -1.49
HEM3	YDL205C	VPS62	P53285	467 aa		5.75	□□□□□ -1.49
HEM3	YDL205C	PXR1	P53335	271 aa	Predicted RBP	5.75	□□□□□ -1.49
HEM3	YDL205C	RIX7	Q07844	837 aa	Known RBP	5.75	□□□□□ -1.49
HEM3	YDL205C	GRX6	Q12438	231 aa		5.75	□□□□□ -1.49
HEM3	YDL205C	HEM15	P16622	393 aa		5.74	□□□□□ -1.49
HEM3	YDL205C	PRP22	P24384	1145 aa	Known RBP	5.74	□□□□□ -1.49
HEM3	YDL205C	YKL107W	P34251	309 aa		5.74	□□□□□ -1.49
HEM3	YDL205C	DEF1	P35732	738 aa	Known RBP	5.74	□□□□□ -1.49
HEM3	YDL205C	CCL1	P37366	393 aa		5.74	□□□□□ -1.49
HEM3	YDL205C	YBR032W	P38223	100 aa		5.74	□□□□□ -1.49
HEM3	YDL205C	POP4	P38336	279 aa		5.74	□□□□□ -1.49
HEM3	YDL205C	MSG5	P38590	489 aa		5.74	□□□□□ -1.49
HEM3	YDL205C	SPC97	P38863	823 aa		5.74	□□□□□ -1.49
HEM3	YDL205C	LCB2	P40970	561 aa		5.74	□□□□□ -1.49
HEM3	YDL205C	VPS4	P52917	437 aa		5.74	□□□□□ -1.49
HEM3	YDL205C	ZIP2	P53061	704 aa		5.74	□□□□□ -1.49
HEM3	YDL205C	HUL5	P53119	910 aa		5.74	□□□□□ -1.49
HEM3	YDL205C	YGR111W	P53265	400 aa		5.74	□□□□□ -1.49
HEM3	YDL205C	YNL040W	P53960	456 aa	Predicted RBP	5.74	□□□□□ -1.49
HEM3	YDL205C	ALD6	P54115	500 aa	Known RBP	5.74	□□□□□ -1.49
HEM3	YDL205C	ORC4	P54791	529 aa		5.74	□□□□□ -1.49
HEM3	YDL205C	TIM8	P57744	87 aa		5.74	□□□□□ -1.49
HEM3	YDL205C	SPO20	Q04359	397 aa		5.74	□□□□□ -1.49
HEM3	YDL205C	YMR027W	Q04371	470 aa		5.74	□□□□□ -1.49
HEM3	YDL205C	OSW1	Q08692	278 aa		5.74	□□□□□ -1.49
HEM3	YDL205C	OCA6	Q12454	224 aa		5.74	□□□□□ -1.49
HEM3	YDL205C	YPT6	Q99260	215 aa		5.74	□□□□□ -1.49
HEM3	YDL205C	FLO11	P08640	1367 aa		5.73	□□□□□ -1.49
HEM3	YDL205C	RPS3	P05750	240 aa	Known RBP	5.73	□□□□□ -1.49
HEM3	YDL205C	ADE3	P07245	946 aa	Known RBP	5.73	□□□□□ -1.49
HEM3	YDL205C	TCP1	P12612	559 aa	Known RBP	5.73	□□□□□ -1.49
HEM3	YDL205C	CAF20	P12962	161 aa	Known RBP	5.73	□□□□□ -1.49
HEM3	YDL205C	RAD51	P25454	400 aa		5.73	□□□□□ -1.49
HEM3	YDL205C	CAP1	P28495	268 aa	Known RBP	5.73	□□□□□ -1.49
HEM3	YDL205C	DPH5	P32469	300 aa	Predicted RBP	5.73	□□□□□ -1.49
HEM3	YDL205C	YKU70	P32807	602 aa		5.73	□□□□□ -1.49
HEM3	YDL205C	LST4	P34239	828 aa		5.73	□□□□□ -1.49
HEM3	YDL205C	YKL151C	P36059	337 aa		5.73	□□□□□ -1.49
HEM3	YDL205C	YMR134W	P40207	237 aa		5.73	□□□□□ -1.49
HEM3	YDL205C	ALG5	P40350	334 aa		5.73	□□□□□ -1.49
HEM3	YDL205C	JEM1	P40358	645 aa		5.73	□□□□□ -1.49
HEM3	YDL205C	RLP7	P40693	322 aa	Known RBP	5.73	□□□□□ -1.49
HEM3	YDL205C	FMS1	P50264	508 aa		5.73	□□□□□ -1.49
HEM3	YDL205C	PCL10	P53124	433 aa		5.73	□□□□□ -1.49
HEM3	YDL205C	GTF1	P53260	183 aa	Predicted RBP	5.73	□□□□□ -1.49
HEM3	YDL205C	SOL4	P53315	255 aa		5.73	□□□□□ -1.49
HEM3	YDL205C	LSC1	P53598	329 aa	Known RBP	5.73	□□□□□ -1.49
HEM3	YDL205C	COG6	P53959	839 aa		5.73	□□□□□ -1.49
HEM3	YDL205C	HMO1	Q03973	246 aa	Known RBP	5.73	□□□□□ -1.49
HEM3	YDL205C	PHM6	Q05637	104 aa		5.73	□□□□□ -1.49
HEM3	YDL205C	YDL124W	Q07551	312 aa	Known RBP	5.73	□□□□□ -1.49
HEM3	YDL205C	XYL2	Q07993	356 aa		5.73	□□□□□ -1.49
HEM3	YDL205C	TUB3	P09734	445 aa	Known RBP	5.72	□□□□□ -1.49
HEM3	YDL205C	REC107	P21651	314 aa		5.72	□□□□□ -1.49
HEM3	YDL205C	KAR4	P25583	335 aa		5.72	□□□□□ -1.49
HEM3	YDL205C	RPS7A	P26786	190 aa	Known RBP	5.72	□□□□□ -1.49
HEM3	YDL205C	YSC83	P32792	385 aa		5.72	□□□□□ -1.49
HEM3	YDL205C	COY1	P34237	679 aa		5.72	□□□□□ -1.49
HEM3	YDL205C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	5.72	□□□□□ -1.49	not detected
HEM3	YDL205C	GSM1	P42950	618 aa		5.72	□□□□□ -1.49
HEM3	YDL205C	UBP6	P43593	499 aa	Known RBP	5.72	□□□□□ -1.49
HEM3	YDL205C	LIA1	P47120	325 aa	Known RBP	5.72	□□□□□ -1.49
HEM3	YDL205C	GCV2	P49095	1034 aa		5.72	□□□□□ -1.49
HEM3	YDL205C	LGE1	Q02796	332 aa	Known RBP	5.72	□□□□□ -1.49
HEM3	YDL205C	YAP6	Q03935	383 aa		5.72	□□□□□ -1.49
HEM3	YDL205C	CDC53	Q12018	815 aa	Known RBP	5.72	□□□□□ -1.49
HEM3	YDL205C	RRG1	Q12167	365 aa	Predicted RBP	5.72	□□□□□ -1.49
HEM3	YDL205C	TAF3	Q12297	353 aa		5.72	□□□□□ -1.49
HEM3	YDL205C	ARP6	Q12509	438 aa		5.72	□□□□□ -1.49
HEM3	YDL205C	CTT1	P06115	562 aa		5.71	□□□□□ -1.5
HEM3	YDL205C	SNA3	P14359	133 aa		5.71	□□□□□ -1.5
HEM3	YDL205C	CBF1	P17106	351 aa		5.71	□□□□□ -1.5
HEM3	YDL205C	SAM2	P19358	384 aa	Known RBP	5.71	□□□□□ -1.5
HEM3	YDL205C	EMC1	P25574	760 aa		5.71	□□□□□ -1.5
HEM3	YDL205C	VPH2	P32341	215 aa		5.71	□□□□□ -1.5
HEM3	YDL205C	EFB1	P32471	206 aa	Known RBP	5.71	□□□□□ -1.5
HEM3	YDL205C	ABD1	P32783	436 aa	Predicted RBP	5.71	□□□□□ -1.5
HEM3	YDL205C	YEL1	P34225	687 aa		5.71	□□□□□ -1.5
HEM3	YDL205C	RFC3	P38629	340 aa		5.71	□□□□□ -1.5
HEM3	YDL205C	BEM4	P39011	633 aa		5.71	□□□□□ -1.5
HEM3	YDL205C	MIG2	P53035	382 aa		5.71	□□□□□ -1.5
HEM3	YDL205C	KTR5	P53966	522 aa	Predicted RBP	5.71	□□□□□ -1.5
HEM3	YDL205C	DOS2	P54858	310 aa		5.71	□□□□□ -1.5
HEM3	YDL205C	BET4	Q00618	327 aa		5.71	□□□□□ -1.5
HEM3	YDL205C	TMA10	Q06177	86 aa		5.71	□□□□□ -1.5
HEM3	YDL205C	PGK1	P00560	416 aa	Known RBP	5.7	□□□□□ -1.5
HEM3	YDL205C	EXO70	P19658	623 aa		5.7	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms