RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W UME1Q03010 460 aa2.37□□□□□ -2.03
UBP1YDL122W ATG16Q03818 150 aa2.37□□□□□ -2.03
UBP1YDL122W SND1Q04007 877 aa2.37□□□□□ -2.03
UBP1YDL122W SAM4Q08985 325 aaKnown RBP2.37□□□□□ -2.03
UBP1YDL122W FAP7Q12055 197 aaPredicted RBP2.37□□□□□ -2.03
UBP1YDL122W SGT2Q12118 346 aaKnown RBP2.37□□□□□ -2.03
UBP1YDL122W NKP1Q12493 238 aa2.37□□□□□ -2.03
UBP1YDL122W ATP4P05626 244 aa2.36□□□□□ -2.03
UBP1YDL122W CDC11P32458 415 aa2.36□□□□□ -2.03
UBP1YDL122W TYE7P33122 291 aaPredicted RBP2.36□□□□□ -2.03
UBP1YDL122W KAE1P36132 386 aa2.36□□□□□ -2.03
UBP1YDL122W RIM11P38615 370 aa2.36□□□□□ -2.03
UBP1YDL122W ELO1P39540 310 aa2.36□□□□□ -2.03
UBP1YDL122W SDA1P53313 767 aaKnown RBP2.36□□□□□ -2.03
UBP1YDL122W CSI1Q04368 295 aa2.36□□□□□ -2.03
UBP1YDL122W GLO2Q05584 274 aa2.36□□□□□ -2.03
UBP1YDL122W YOL073CQ08232 322 aa2.36□□□□□ -2.03
UBP1YDL122W CMR1Q12510 522 aaKnown RBP2.36□□□□□ -2.03
UBP1YDL122W HEM13P11353 328 aaKnown RBP2.36□□□□□ -2.03
UBP1YDL122W RPA135P22138 1203 aaKnown RBP2.36□□□□□ -2.03
UBP1YDL122W NPR1P22211 790 aa2.36□□□□□ -2.03
UBP1YDL122W HIR1P32479 840 aa2.36□□□□□ -2.03
UBP1YDL122W SEF1P34228 1148 aa2.36□□□□□ -2.03
UBP1YDL122W YKL107WP34251 309 aa2.36□□□□□ -2.03
UBP1YDL122W MTG2P38860 518 aa2.36□□□□□ -2.03
UBP1YDL122W DUN1P39009 513 aa2.36□□□□□ -2.03
UBP1YDL122W CCT3P39077 534 aaKnown RBP2.36□□□□□ -2.03
UBP1YDL122W MAL11P53048 616 aa2.36□□□□□ -2.03
UBP1YDL122W MED7Q08278 222 aa2.36□□□□□ -2.03
UBP1YDL122W YLR122CQ12312 125 aa2.36□□□□□ -2.03
UBP1YDL122W MAK31P23059 88 aa2.35□□□□□ -2.03
UBP1YDL122W GSY1P23337 708 aa2.35□□□□□ -2.03
UBP1YDL122W SOL2P37262 315 aa2.35□□□□□ -2.03
UBP1YDL122W MMS4P38257 691 aa2.35□□□□□ -2.03
UBP1YDL122W MBP1P39678 833 aa2.35□□□□□ -2.03
UBP1YDL122W SEC24P40482 926 aaKnown RBP2.35□□□□□ -2.03
UBP1YDL122W CEP3P40969 608 aa2.35□□□□□ -2.03
UBP1YDL122W YGL176CP46945 554 aa2.35□□□□□ -2.03
UBP1YDL122W YGR021WP53212 290 aa2.35□□□□□ -2.03
UBP1YDL122W MFM1Q02783 413 aa2.35□□□□□ -2.03
UBP1YDL122W WAR1Q03631 944 aa2.35□□□□□ -2.03
UBP1YDL122W INP2Q03824 705 aa2.35□□□□□ -2.03
UBP1YDL122W AAD4Q07747 329 aa2.35□□□□□ -2.03
UBP1YDL122W HBN1Q96VH4 193 aa2.35□□□□□ -2.03
UBP1YDL122W POL2P21951 2222 aaKnown RBP2.35□□□□□ -2.03
UBP1YDL122W PYC1P11154 1178 aaKnown RBP2.34□□□□□ -2.03
UBP1YDL122W MEF1P25039 761 aa2.34□□□□□ -2.03
UBP1YDL122W SYP1P25623 870 aaKnown RBP2.34□□□□□ -2.03
UBP1YDL122W MKK2P32491 506 aa2.34□□□□□ -2.03
UBP1YDL122W COT1P32798 439 aa2.34□□□□□ -2.03
UBP1YDL122W TKL2P33315 681 aa2.34□□□□□ -2.03
UBP1YDL122W SGE1P33335 543 aa2.34□□□□□ -2.03
UBP1YDL122W YKL077WP36081 392 aa2.34□□□□□ -2.03
UBP1YDL122W TY4A-JP47023 414 aa2.34□□□□□ -2.03
UBP1YDL122W IKS1P47042 667 aa2.34□□□□□ -2.03
UBP1YDL122W ASK10P48361 1146 aa2.34□□□□□ -2.03
UBP1YDL122W GPG1P53130 126 aa2.34□□□□□ -2.03
UBP1YDL122W GPD1Q00055 391 aaKnown RBP2.34□□□□□ -2.03
UBP1YDL122W TRE2Q08693 809 aa2.34□□□□□ -2.03
UBP1YDL122W MDM12Q92328 271 aa2.34□□□□□ -2.03
UBP1YDL122W CLN3P13365 580 aa2.34□□□□□ -2.03
UBP1YDL122W MTC2P34246 357 aa2.34□□□□□ -2.03
UBP1YDL122W TFA2P36145 328 aa2.34□□□□□ -2.03
UBP1YDL122W BAP2P38084 609 aa2.34□□□□□ -2.03
UBP1YDL122W MCM7P38132 845 aa2.34□□□□□ -2.03
UBP1YDL122W APM3P38153 483 aa2.34□□□□□ -2.03
UBP1YDL122W YBR071WP38243 211 aa2.34□□□□□ -2.03
UBP1YDL122W VID24P38263 362 aa2.34□□□□□ -2.03
UBP1YDL122W RTT102P53330 157 aa2.34□□□□□ -2.03
UBP1YDL122W YNL146WP53906 100 aa2.34□□□□□ -2.03
UBP1YDL122W AQR1P53943 586 aa2.34□□□□□ -2.03
UBP1YDL122W COG6P53959 839 aa2.34□□□□□ -2.03
UBP1YDL122W HFD1Q04458 532 aa2.34□□□□□ -2.03
UBP1YDL122W PRM6Q04705 352 aa2.34□□□□□ -2.03
UBP1YDL122W RTN1Q04947 295 aaKnown RBP2.34□□□□□ -2.03
UBP1YDL122W COG4Q06096 861 aa2.34□□□□□ -2.03
UBP1YDL122W YLR001CQ07895 862 aa2.34□□□□□ -2.03
UBP1YDL122W IES4Q08561 116 aa2.34□□□□□ -2.03
UBP1YDL122W HUA2Q12134 243 aa2.34□□□□□ -2.03
UBP1YDL122W PDR18P53756 1333 aa2.34□□□□□ -2.04
UBP1YDL122W TRP3P00937 484 aa2.33□□□□□ -2.04
UBP1YDL122W TPK1P06244 397 aa2.33□□□□□ -2.04
UBP1YDL122W SRD1P09007 221 aa2.33□□□□□ -2.04
UBP1YDL122W TOP3P13099 656 aa2.33□□□□□ -2.04
UBP1YDL122W CHS2P14180 963 aa2.33□□□□□ -2.04
UBP1YDL122W DBP5P20449 482 aaKnown RBP2.33□□□□□ -2.04
UBP1YDL122W VBA3P25594 458 aa2.33□□□□□ -2.04
UBP1YDL122W DSS4P32601 143 aa2.33□□□□□ -2.04
UBP1YDL122W HBS1P32769 611 aaKnown RBP2.33□□□□□ -2.04
UBP1YDL122W DOM34P33309 386 aa2.33□□□□□ -2.04
UBP1YDL122W HSP78P33416 811 aa2.33□□□□□ -2.04
UBP1YDL122W SAS3P34218 831 aa2.33□□□□□ -2.04
UBP1YDL122W MAE1P36013 669 aaKnown RBP2.33□□□□□ -2.04
UBP1YDL122W YKR073CP36153 106 aa2.33□□□□□ -2.04
UBP1YDL122W EXO5P38289 585 aa2.33□□□□□ -2.04
UBP1YDL122W VPS27P40343 622 aaKnown RBP2.33□□□□□ -2.04
UBP1YDL122W CNN1P43618 361 aa2.33□□□□□ -2.04
UBP1YDL122W PUF3Q07807 879 aaKnown RBP RIP-Chip data2.33□□□□□ -2.04not detected
UBP1YDL122W GPM2Q12008 311 aa2.33□□□□□ -2.04
UBP1YDL122W SST2P11972 698 aaKnown RBP2.33□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 35.2 ms