RNA–Protein interactions for RNA: YDL041W

YDL041W, Transcript of Dubious open reading frame, yeast

Gene YDL041W, Length 354 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDL041W	YDL041W	AAT1	Q01802	451 aa		2.67	□□□□□ -1.98
YDL041W	YDL041W	ORM2	Q06144	216 aa		2.67	□□□□□ -1.98
YDL041W	YDL041W	IRC3	Q06683	689 aa		2.67	□□□□□ -1.98
YDL041W	YDL041W	AAD4	Q07747	329 aa		2.67	□□□□□ -1.98
YDL041W	YDL041W	AHA1	Q12449	350 aa	Known RBP	2.67	□□□□□ -1.98
YDL041W	YDL041W	YER175W-A	Q8TGU4	54 aa		2.67	□□□□□ -1.98
YDL041W	YDL041W	AI5_ALPHA	Q9ZZX1	630 aa		2.67	□□□□□ -1.98
YDL041W	YDL041W	SEC3	P33332	1336 aa	Known RBP	2.67	□□□□□ -1.98
YDL041W	YDL041W	GAL1	P04385	528 aa		2.66	□□□□□ -1.98
YDL041W	YDL041W	YCR061W	P25639	631 aa		2.66	□□□□□ -1.98
YDL041W	YDL041W	PRE2	P30656	287 aa	Known RBP	2.66	□□□□□ -1.98
YDL041W	YDL041W	HOT13	P36078	116 aa		2.66	□□□□□ -1.98
YDL041W	YDL041W	APD1	P38281	316 aa		2.66	□□□□□ -1.98
YDL041W	YDL041W	MTG2	P38860	518 aa		2.66	□□□□□ -1.98
YDL041W	YDL041W	MAM1	P40065	302 aa		2.66	□□□□□ -1.98
YDL041W	YDL041W	VPS27	P40343	622 aa	Known RBP	2.66	□□□□□ -1.98
YDL041W	YDL041W	LAS21	P40367	830 aa		2.66	□□□□□ -1.98
YDL041W	YDL041W	MAD3	P47074	515 aa		2.66	□□□□□ -1.98
YDL041W	YDL041W	COG2	P53271	262 aa		2.66	□□□□□ -1.98
YDL041W	YDL041W	PAP2	P53632	584 aa	Known RBP	2.66	□□□□□ -1.98
YDL041W	YDL041W	YML122C	Q03207	126 aa		2.66	□□□□□ -1.98
YDL041W	YDL041W	SEG1	Q04279	960 aa		2.66	□□□□□ -1.98
YDL041W	YDL041W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	2.66	□□□□□ -1.98	not detected
YDL041W	YDL041W	VPS15	P22219	1454 aa		2.65	□□□□□ -1.98
YDL041W	YDL041W	XRN1	P22147	1528 aa	Known RBP	2.65	□□□□□ -1.99
YDL041W	YDL041W	BI2	P03873	423 aa		2.65	□□□□□ -1.99
YDL041W	YDL041W	NUP1	P20676	1076 aa		2.65	□□□□□ -1.99
YDL041W	YDL041W	SWC3	P31376	625 aa		2.65	□□□□□ -1.99
YDL041W	YDL041W	GDA1	P32621	518 aa		2.65	□□□□□ -1.99
YDL041W	YDL041W	YPT53	P36019	220 aa		2.65	□□□□□ -1.99
YDL041W	YDL041W	APM3	P38153	483 aa		2.65	□□□□□ -1.99
YDL041W	YDL041W	STT3	P39007	718 aa	Known RBP	2.65	□□□□□ -1.99
YDL041W	YDL041W	RAD26	P40352	1085 aa		2.65	□□□□□ -1.99
YDL041W	YDL041W	HIS6	P40545	261 aa		2.65	□□□□□ -1.99
YDL041W	YDL041W	TDA10	P42938	290 aa		2.65	□□□□□ -1.99
YDL041W	YDL041W	QRI7	P43122	407 aa		2.65	□□□□□ -1.99
YDL041W	YDL041W	YJR008W	P47085	338 aa		2.65	□□□□□ -1.99
YDL041W	YDL041W	ACS1	Q01574	713 aa		2.65	□□□□□ -1.99
YDL041W	YDL041W	RIM13	Q03792	727 aa		2.65	□□□□□ -1.99
YDL041W	YDL041W	ARA2	Q04212	335 aa		2.65	□□□□□ -1.99
YDL041W	YDL041W	CRF1	Q04930	467 aa		2.65	□□□□□ -1.99
YDL041W	YDL041W	THI7	Q05998	598 aa		2.65	□□□□□ -1.99
YDL041W	YDL041W	PCL8	Q08966	492 aa		2.65	□□□□□ -1.99
YDL041W	YDL041W	PAN1	P32521	1480 aa		2.65	□□□□□ -1.99
YDL041W	YDL041W	CHO2	P05374	869 aa	Known RBP	2.64	□□□□□ -1.99
YDL041W	YDL041W	PIF1	P07271	859 aa		2.64	□□□□□ -1.99
YDL041W	YDL041W	MIS1	P09440	975 aa	Known RBP	2.64	□□□□□ -1.99
YDL041W	YDL041W	PHO81	P17442	1178 aa		2.64	□□□□□ -1.99
YDL041W	YDL041W	SIR1	P21691	654 aa		2.64	□□□□□ -1.99
YDL041W	YDL041W	PDE1	P22434	369 aa		2.64	□□□□□ -1.99
YDL041W	YDL041W	MSH1	P25846	959 aa		2.64	□□□□□ -1.99
YDL041W	YDL041W	GSY2	P27472	705 aa		2.64	□□□□□ -1.99
YDL041W	YDL041W	ARB1	P40024	610 aa	Known RBP	2.64	□□□□□ -1.99
YDL041W	YDL041W	CAB2	P40506	365 aa		2.64	□□□□□ -1.99
YDL041W	YDL041W	FAF1	P40546	346 aa	Predicted RBP	2.64	□□□□□ -1.99
YDL041W	YDL041W	ATP23	P53722	227 aa		2.64	□□□□□ -1.99
YDL041W	YDL041W	YNL092W	P53934	400 aa		2.64	□□□□□ -1.99
YDL041W	YDL041W	UBP16	Q02863	499 aa		2.64	□□□□□ -1.99
YDL041W	YDL041W	IOC4	Q04213	475 aa		2.64	□□□□□ -1.99
YDL041W	YDL041W	HIM1	Q06674	414 aa		2.64	□□□□□ -1.99
YDL041W	YDL041W	AIM6	Q07716	390 aa		2.64	□□□□□ -1.99
YDL041W	YDL041W	RRP6	Q12149	733 aa	Known RBP	2.64	□□□□□ -1.99
YDL041W	YDL041W	PGK1	P00560	416 aa	Known RBP	2.63	□□□□□ -1.99
YDL041W	YDL041W	MSS18	P08593	268 aa		2.63	□□□□□ -1.99
YDL041W	YDL041W	AQY1	P0CD91	305 aa		2.63	□□□□□ -1.99
YDL041W	YDL041W	POL3	P15436	1097 aa		2.63	□□□□□ -1.99
YDL041W	YDL041W	KGD2	P19262	463 aa	Predicted RBP	2.63	□□□□□ -1.99
YDL041W	YDL041W	RIT1	P23796	513 aa		2.63	□□□□□ -1.99
YDL041W	YDL041W	SIP1	P32578	815 aa		2.63	□□□□□ -1.99
YDL041W	YDL041W	EXO1	P39875	702 aa		2.63	□□□□□ -1.99
YDL041W	YDL041W	CIR1	P42940	261 aa		2.63	□□□□□ -1.99
YDL041W	YDL041W	ESF2	P53743	316 aa	Known RBP	2.63	□□□□□ -1.99
YDL041W	YDL041W	YNL058C	P53947	316 aa		2.63	□□□□□ -1.99
YDL041W	YDL041W	YPL108W	Q02872	168 aa	Predicted RBP	2.63	□□□□□ -1.99
YDL041W	YDL041W	ATG21	Q02887	496 aa		2.63	□□□□□ -1.99
YDL041W	YDL041W	YML119W	Q03208	357 aa		2.63	□□□□□ -1.99
YDL041W	YDL041W	RAD33	Q04231	177 aa		2.63	□□□□□ -1.99
YDL041W	YDL041W	EIS1	Q05050	843 aa	Known RBP	2.63	□□□□□ -1.99
YDL041W	YDL041W	BRE1	Q07457	700 aa	Known RBP	2.63	□□□□□ -1.99
YDL041W	YDL041W	IWR1	Q07532	353 aa	Predicted RBP	2.63	□□□□□ -1.99
YDL041W	YDL041W	CYK3	Q07533	885 aa		2.63	□□□□□ -1.99
YDL041W	YDL041W	LCB4	Q12246	624 aa		2.63	□□□□□ -1.99
YDL041W	YDL041W	RDL1	Q12305	139 aa	Known RBP	2.63	□□□□□ -1.99
YDL041W	YDL041W	DOP1	Q03921	1698 aa		2.63	□□□□□ -1.99
YDL041W	YDL041W	SKI3	P17883	1432 aa	Known RBP	2.62	□□□□□ -1.99
YDL041W	YDL041W	AMD2	P22580	549 aa		2.62	□□□□□ -1.99
YDL041W	YDL041W	FRD1	P32614	470 aa	Known RBP	2.62	□□□□□ -1.99
YDL041W	YDL041W	RPF2	P36160	344 aa	Known RBP	2.62	□□□□□ -1.99
YDL041W	YDL041W	YHL041W	P38730	149 aa		2.62	□□□□□ -1.99
YDL041W	YDL041W	ARO9	P38840	513 aa	Predicted RBP	2.62	□□□□□ -1.99
YDL041W	YDL041W	LTP1	P40347	161 aa		2.62	□□□□□ -1.99
YDL041W	YDL041W	SKP2	P42843	763 aa		2.62	□□□□□ -1.99
YDL041W	YDL041W	BPL1	P48445	690 aa	Predicted RBP	2.62	□□□□□ -1.99
YDL041W	YDL041W	CPR6	P53691	371 aa	Known RBP	2.62	□□□□□ -1.99
YDL041W	YDL041W	UBX4	P54730	416 aa		2.62	□□□□□ -1.99
YDL041W	YDL041W	MOT3	P54785	490 aa	Known RBP	2.62	□□□□□ -1.99
YDL041W	YDL041W	YPL071C	Q02864	156 aa		2.62	□□□□□ -1.99
YDL041W	YDL041W	PLM2	Q04383	521 aa		2.62	□□□□□ -1.99
YDL041W	YDL041W	YML053C	Q04978	212 aa		2.62	□□□□□ -1.99
YDL041W	YDL041W	SPN1	Q06505	410 aa	Predicted RBP	2.62	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms