RNA–Protein interactions for RNA: YBR283C

SSH1, Transcript of Subunit of the Ssh1 translocon complex, yeast

Gene SSH1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSH1	YBR283C	PHO4	P07270	312 aa	Known RBP	4.24	□□□□□ -1.73
SSH1	YBR283C	SSC1	P0CS90	654 aa	Known RBP	4.24	□□□□□ -1.73
SSH1	YBR283C	TCP1	P12612	559 aa	Known RBP	4.24	□□□□□ -1.73
SSH1	YBR283C	CDC42	P19073	191 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	RNR1	P21524	888 aa	Known RBP	4.24	□□□□□ -1.73
SSH1	YBR283C	DAL2	P25335	343 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	MLF3	P32047	452 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	KAP122	P32767	1081 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	TIM23	P32897	222 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	SEC66	P33754	206 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	ATG19	P35193	415 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	NUP120	P35729	1037 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	CUE2	P36075	443 aa	Known RBP	4.24	□□□□□ -1.73
SSH1	YBR283C	YKR015C	P36111	568 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	YHL008C	P38750	627 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	SMF2	P38778	549 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	LAM1	P38851	1228 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	RAD55	P38953	406 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	STL1	P39932	569 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	NTA1	P40354	457 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	ARG2	P40360	574 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	TMA108	P40462	946 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	RLP7	P40693	322 aa	Known RBP	4.24	□□□□□ -1.73
SSH1	YBR283C	NUP85	P46673	744 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	INP52	P50942	1183 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	YML6	P51998	286 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	NOG2	P53742	486 aa	Known RBP	4.24	□□□□□ -1.73
SSH1	YBR283C	KTR5	P53966	522 aa	Predicted RBP	4.24	□□□□□ -1.73
SSH1	YBR283C	RSC4	Q02206	625 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	PRM6	Q04705	352 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	ECM30	Q06673	1274 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	YPR202W	Q08993	238 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	VIK1	Q12045	647 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	MSH5	Q12175	901 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	MNL2	Q12205	849 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	STB3	Q12427	513 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	AVL9	Q12500	764 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	ATP2	P00830	511 aa	Known RBP	4.24	□□□□□ -1.73
SSH1	YBR283C	CDC24	P11433	854 aa	Predicted RBP	4.24	□□□□□ -1.73
SSH1	YBR283C	DBP5	P20449	482 aa	Known RBP	4.24	□□□□□ -1.73
SSH1	YBR283C	AAD3	P25612	363 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
SSH1	YBR283C	RAD14	P28519	371 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	EFT1	P32324	842 aa	Known RBP	4.24	□□□□□ -1.73
SSH1	YBR283C	MUD1	P32605	298 aa	Known RBP	4.24	□□□□□ -1.73
SSH1	YBR283C	TMT1	P32643	299 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	PEX2	P32800	271 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	IRS4	P36115	615 aa	Known RBP	4.24	□□□□□ -1.73
SSH1	YBR283C	DRE2	P36152	348 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	YKR078W	P36158	585 aa	Known RBP	4.24	□□□□□ -1.73
SSH1	YBR283C	ETR1	P38071	380 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	CTP1	P38152	299 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	DIA4	P38705	446 aa	Predicted RBP	4.24	□□□□□ -1.73
SSH1	YBR283C	TRM5	P38793	499 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	ARB1	P40024	610 aa	Known RBP	4.24	□□□□□ -1.73
SSH1	YBR283C	QDR2	P40474	542 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	CAB2	P40506	365 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	HLJ1	P48353	224 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	RNR4	P49723	345 aa	Known RBP	4.24	□□□□□ -1.73
SSH1	YBR283C	TAM41	P53230	385 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	BIO4	P53630	237 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	RPA49	Q01080	415 aa	Predicted RBP	4.24	□□□□□ -1.73
SSH1	YBR283C	ROD1	Q02805	837 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	BUD22	Q04347	519 aa	Known RBP	4.24	□□□□□ -1.73
SSH1	YBR283C	IVY1	Q04934	453 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	BSC2	Q05611	235 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	COQ9	Q05779	260 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	ADE13	Q05911	482 aa	Known RBP	4.24	□□□□□ -1.73
SSH1	YBR283C	NDL1	Q06568	189 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	YET3	Q07451	203 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	SMC5	Q08204	1093 aa		4.24	□□□□□ -1.73
SSH1	YBR283C	IMA3	P0CW40	589 aa		4.23	□□□□□ -1.73
SSH1	YBR283C	IMA4	P0CW41	589 aa		4.23	□□□□□ -1.73
SSH1	YBR283C	MSD1	P15179	658 aa	Known RBP	4.23	□□□□□ -1.73
SSH1	YBR283C	ADY2	P25613	283 aa		4.23	□□□□□ -1.73
SSH1	YBR283C	DGR2	P32330	852 aa		4.23	□□□□□ -1.73
SSH1	YBR283C	YSC84	P32793	468 aa		4.23	□□□□□ -1.73
SSH1	YBR283C	RPT1	P33299	467 aa	Known RBP	4.23	□□□□□ -1.73
SSH1	YBR283C	RRP14	P36080	434 aa	Known RBP	4.23	□□□□□ -1.73
SSH1	YBR283C	GIP1	P38229	639 aa		4.23	□□□□□ -1.73
SSH1	YBR283C	FRT2	P39734	528 aa		4.23	□□□□□ -1.73
SSH1	YBR283C	SIT1	P39980	628 aa		4.23	□□□□□ -1.73
SSH1	YBR283C	TMN3	P40071	706 aa		4.23	□□□□□ -1.73
SSH1	YBR283C	MAM33	P40513	266 aa		4.23	□□□□□ -1.73
SSH1	YBR283C	SBE2	P42223	864 aa	Known RBP	4.23	□□□□□ -1.73
SSH1	YBR283C	RGD2	P43556	714 aa		4.23	□□□□□ -1.73
SSH1	YBR283C	SET2	P46995	733 aa	Known RBP	4.23	□□□□□ -1.73
SSH1	YBR283C	CPR7	P47103	393 aa		4.23	□□□□□ -1.73
SSH1	YBR283C	YGR016W	P53209	190 aa		4.23	□□□□□ -1.73
SSH1	YBR283C	YKR005C	Q02203	525 aa		4.23	□□□□□ -1.73
SSH1	YBR283C	SXM1	Q04175	944 aa	Known RBP	4.23	□□□□□ -1.73
SSH1	YBR283C	KAP95	Q06142	861 aa	Known RBP	4.23	□□□□□ -1.73
SSH1	YBR283C	IMA2	Q08295	589 aa		4.23	□□□□□ -1.73
SSH1	YBR283C	GIS3	Q12418	502 aa		4.23	□□□□□ -1.73
SSH1	YBR283C	RRP36	Q12481	300 aa	Predicted RBP	4.23	□□□□□ -1.73
SSH1	YBR283C	AI5_BETA	Q9ZZX0	354 aa		4.23	□□□□□ -1.73
SSH1	YBR283C	UBR2	Q07963	1872 aa		4.23	□□□□□ -1.73
SSH1	YBR283C	ADE4	P04046	510 aa	Known RBP	4.22	□□□□□ -1.73
SSH1	YBR283C	MPH2	P0CD99	609 aa		4.22	□□□□□ -1.73
SSH1	YBR283C	SBP1	P10080	294 aa	Known RBP	4.22	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 114.5 ms