RNA–Protein interactions for RNA: YBR186W

PCH2, Transcript of Hexameric ring ATPase that remodels chromosome axis protein Hop1p, yeast

Gene PCH2, Length 1,695 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCH2	YBR186W	CRP1	P38845	465 aa	Known RBP	11.91	□□□□□ -0.5
PCH2	YBR186W	HMF1	P40037	129 aa	Known RBP	11.91	□□□□□ -0.5
PCH2	YBR186W	CUS2	P53830	285 aa	Predicted RBP	11.91	□□□□□ -0.5
PCH2	YBR186W	YNL058C	P53947	316 aa		11.91	□□□□□ -0.5
PCH2	YBR186W	DYN3	Q04949	312 aa		11.91	□□□□□ -0.5
PCH2	YBR186W	CDA1	Q06702	301 aa		11.91	□□□□□ -0.5
PCH2	YBR186W	SHS1	Q07657	551 aa		11.91	□□□□□ -0.5
PCH2	YBR186W	YEL077C	Q3E7X8	1277 aa		11.91	□□□□□ -0.5
PCH2	YBR186W	MSS116	P15424	664 aa	Known RBP	11.9	□□□□□ -0.5
PCH2	YBR186W	TPO5	P36029	618 aa		11.9	□□□□□ -0.5
PCH2	YBR186W	YKR023W	P36119	530 aa	Known RBP	11.9	□□□□□ -0.5
PCH2	YBR186W	TVP38	P36164	337 aa		11.9	□□□□□ -0.5
PCH2	YBR186W	OTU2	P38747	307 aa	Known RBP	11.9	□□□□□ -0.5
PCH2	YBR186W	PEX18	P38855	283 aa		11.9	□□□□□ -0.5
PCH2	YBR186W	YFR006W	P43590	535 aa		11.9	□□□□□ -0.5
PCH2	YBR186W	MND1	P53102	219 aa		11.9	□□□□□ -0.5
PCH2	YBR186W	MCM21	Q06675	368 aa		11.9	□□□□□ -0.5
PCH2	YBR186W	SNF4	P12904	322 aa		11.89	□□□□□ -0.51
PCH2	YBR186W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	11.89	□□□□□ -0.51	not detected
PCH2	YBR186W	GID7	P25569	745 aa		11.89	□□□□□ -0.51
PCH2	YBR186W	HRR25	P29295	494 aa	Known RBP	11.89	□□□□□ -0.51
PCH2	YBR186W	VID24	P38263	362 aa		11.89	□□□□□ -0.51
PCH2	YBR186W	MGS1	P40151	587 aa		11.89	□□□□□ -0.51
PCH2	YBR186W	RIC1	P40395	1056 aa		11.89	□□□□□ -0.51
PCH2	YBR186W	NIT1	P40447	199 aa		11.89	□□□□□ -0.51
PCH2	YBR186W	MRK1	P50873	501 aa		11.89	□□□□□ -0.51
PCH2	YBR186W	GET1	P53192	235 aa		11.89	□□□□□ -0.51
PCH2	YBR186W	YPR003C	P53394	754 aa		11.89	□□□□□ -0.51
PCH2	YBR186W	TRM44	Q02648	567 aa	Known RBP	11.89	□□□□□ -0.51
PCH2	YBR186W	YLR455W	Q06188	304 aa		11.89	□□□□□ -0.51
PCH2	YBR186W	HSH49	Q99181	213 aa	Predicted RBP	11.89	□□□□□ -0.51
PCH2	YBR186W	HSC82	P15108	705 aa	Known RBP	11.88	□□□□□ -0.51
PCH2	YBR186W	YMC2	P38087	329 aa		11.88	□□□□□ -0.51
PCH2	YBR186W	KAP104	P38217	918 aa	Known RBP	11.88	□□□□□ -0.51
PCH2	YBR186W	BRL1	P38770	471 aa		11.88	□□□□□ -0.51
PCH2	YBR186W	SPO71	Q03868	1245 aa		11.88	□□□□□ -0.51
PCH2	YBR186W	THI20	Q08224	551 aa		11.88	□□□□□ -0.51
PCH2	YBR186W	VPS5	Q92331	675 aa		11.88	□□□□□ -0.51
PCH2	YBR186W	NHA1	Q99271	985 aa		11.88	□□□□□ -0.51
PCH2	YBR186W	RHO2	P06781	192 aa		11.87	□□□□□ -0.51
PCH2	YBR186W	ERR1	P0CX10	437 aa		11.87	□□□□□ -0.51
PCH2	YBR186W	ERR2	P0CX11	437 aa		11.87	□□□□□ -0.51
PCH2	YBR186W	TFB1	P32776	642 aa		11.87	□□□□□ -0.51
PCH2	YBR186W	SRB2	P34162	210 aa		11.87	□□□□□ -0.51
PCH2	YBR186W	MMS4	P38257	691 aa		11.87	□□□□□ -0.51
PCH2	YBR186W	ATG12	P38316	186 aa		11.87	□□□□□ -0.51
PCH2	YBR186W	SHC1	P39000	512 aa		11.87	□□□□□ -0.51
PCH2	YBR186W	IES5	P40060	125 aa		11.87	□□□□□ -0.51
PCH2	YBR186W	MND2	P40577	368 aa		11.87	□□□□□ -0.51
PCH2	YBR186W	ERR3	P42222	437 aa		11.87	□□□□□ -0.51
PCH2	YBR186W	RKM2	Q03942	479 aa		11.87	□□□□□ -0.51
PCH2	YBR186W	SEC10	Q06245	871 aa		11.87	□□□□□ -0.51
PCH2	YBR186W	TPO1	Q07824	586 aa		11.87	□□□□□ -0.51
PCH2	YBR186W	GPI13	Q07830	1017 aa		11.87	□□□□□ -0.51
PCH2	YBR186W	PSY3	Q12318	242 aa		11.87	□□□□□ -0.51
PCH2	YBR186W	ASP3-2	P0CX77	362 aa		11.87	□□□□□ -0.51
PCH2	YBR186W	ASP3-3	P0CX78	362 aa		11.87	□□□□□ -0.51
PCH2	YBR186W	ASP3-4	P0CX79	362 aa		11.87	□□□□□ -0.51
PCH2	YBR186W	ASP3-1	P0CZ17	362 aa		11.87	□□□□□ -0.51
PCH2	YBR186W	BUD23	P25627	275 aa	Predicted RBP	11.87	□□□□□ -0.51
PCH2	YBR186W	MDJ1	P35191	511 aa		11.87	□□□□□ -0.51
PCH2	YBR186W	EAP1	P36041	632 aa	Known RBP	11.87	□□□□□ -0.51
PCH2	YBR186W	GTT3	P39996	337 aa		11.87	□□□□□ -0.51
PCH2	YBR186W	RPT2	P40327	437 aa	Known RBP	11.87	□□□□□ -0.51
PCH2	YBR186W	STB2	P46679	850 aa		11.87	□□□□□ -0.51
PCH2	YBR186W	REX2	P54964	269 aa	Known RBP	11.87	□□□□□ -0.51
PCH2	YBR186W	KIN4	Q01919	800 aa		11.87	□□□□□ -0.51
PCH2	YBR186W	UBX5	Q06682	500 aa		11.87	□□□□□ -0.51
PCH2	YBR186W	FMP25	Q08023	583 aa		11.87	□□□□□ -0.51
PCH2	YBR186W	YMR030W-A	Q3E760	96 aa		11.87	□□□□□ -0.51
PCH2	YBR186W	IZH4	Q99393	312 aa		11.87	□□□□□ -0.51
PCH2	YBR186W	AI5_ALPHA	Q9ZZX1	630 aa		11.87	□□□□□ -0.51
PCH2	YBR186W	RIM1	P32445	135 aa	Known RBP	11.86	□□□□□ -0.51
PCH2	YBR186W	AEP1	P32493	518 aa		11.86	□□□□□ -0.51
PCH2	YBR186W	UGP1	P32861	499 aa	Known RBP	11.86	□□□□□ -0.51
PCH2	YBR186W	NOP4	P37838	685 aa	Known RBP	11.86	□□□□□ -0.51
PCH2	YBR186W	YBL086C	P38177	466 aa		11.86	□□□□□ -0.51
PCH2	YBR186W	YEL025C	P39991	1188 aa		11.86	□□□□□ -0.51
PCH2	YBR186W	YFL040W	P43562	540 aa		11.86	□□□□□ -0.51
PCH2	YBR186W	ASG7	P46993	209 aa		11.86	□□□□□ -0.51
PCH2	YBR186W	CCT8	P47079	568 aa	Known RBP	11.86	□□□□□ -0.51
PCH2	YBR186W	SLU7	Q02775	382 aa	Known RBP	11.86	□□□□□ -0.51
PCH2	YBR186W	JIP5	Q06214	492 aa	Predicted RBP	11.86	□□□□□ -0.51
PCH2	YBR186W	YDL114W	Q07530	308 aa		11.86	□□□□□ -0.51
PCH2	YBR186W	THI21	Q08975	551 aa		11.86	□□□□□ -0.51
PCH2	YBR186W	YLL058W	Q12198	575 aa		11.86	□□□□□ -0.51
PCH2	YBR186W	BRR1	Q99177	341 aa	Predicted RBP	11.86	□□□□□ -0.51
PCH2	YBR186W	YPK1	P12688	680 aa	Known RBP	11.85	□□□□□ -0.51
PCH2	YBR186W	MSM1	P22438	575 aa		11.85	□□□□□ -0.51
PCH2	YBR186W	PTP2	P29461	750 aa		11.85	□□□□□ -0.51
PCH2	YBR186W	DPH2	P32461	534 aa		11.85	□□□□□ -0.51
PCH2	YBR186W	FRE1	P32791	686 aa		11.85	□□□□□ -0.51
PCH2	YBR186W	SWP82	P43554	623 aa		11.85	□□□□□ -0.51
PCH2	YBR186W	YGL176C	P46945	554 aa		11.85	□□□□□ -0.51
PCH2	YBR186W	ASN2	P49090	572 aa	Known RBP	11.85	□□□□□ -0.51
PCH2	YBR186W	SED5	Q01590	340 aa		11.85	□□□□□ -0.51
PCH2	YBR186W	GLO2	Q05584	274 aa		11.85	□□□□□ -0.51
PCH2	YBR186W	ECM7	Q06200	448 aa		11.85	□□□□□ -0.51
PCH2	YBR186W	GYP1	Q08484	637 aa		11.85	□□□□□ -0.51
PCH2	YBR186W	CTT1	P06115	562 aa		11.84	□□□□□ -0.51

Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms