RNA–Protein interactions for RNA: ENST00000638820.1

SCN8A-215, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5 BASIC

Gene SCN8A, Length 3,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-215ENST00000638820 RTN1Q16799 776 aa15.53■□□□□ 0.08
SCN8A-215ENST00000638820 SOGA3Q5TF21 947 aa15.53■□□□□ 0.08
SCN8A-215ENST00000638820 HDAC9Q9UKV0 1011 aa15.53■□□□□ 0.08
SCN8A-215ENST00000638820 CCDC196A0A1B0GTZ2 297 aa15.52■□□□□ 0.08
SCN8A-215ENST00000638820 F13A1P00488 732 aa15.52■□□□□ 0.08
SCN8A-215ENST00000638820 DDIT3P35638 169 aa15.52■□□□□ 0.08
SCN8A-215ENST00000638820 STRIP1Q5VSL9 837 aa15.52■□□□□ 0.08
SCN8A-215ENST00000638820 TTC6Q86TZ1 520 aa15.52■□□□□ 0.08
SCN8A-215ENST00000638820 SLC44A5Q8NCS7 719 aa15.52■□□□□ 0.08
SCN8A-215ENST00000638820 UPF1Q92900 1129 aaKnown RBP eCLIP15.52■□□□□ 0.08
SCN8A-215ENST00000638820 SLC26A6Q9BXS9 759 aa15.52■□□□□ 0.08
SCN8A-215ENST00000638820 TNS1Q9HBL0 1735 aaKnown RBP15.52■□□□□ 0.07
SCN8A-215ENST00000638820 CRKP46108 304 aa15.52■□□□□ 0.07
SCN8A-215ENST00000638820 CERS5Q8N5B7 392 aa15.52■□□□□ 0.07
SCN8A-215ENST00000638820 CTCFLQ8NI51 663 aaPredicted RBP15.52■□□□□ 0.07
SCN8A-215ENST00000638820 RTFDC1Q9BY42 306 aaPredicted RBP15.52■□□□□ 0.07
SCN8A-215ENST00000638820 TAOK3Q9H2K8 898 aa15.52■□□□□ 0.07
SCN8A-215ENST00000638820 RBM26Q5T8P6 1007 aaKnown RBP15.52■□□□□ 0.07
SCN8A-215ENST00000638820 PHKBQ93100 1093 aa15.52■□□□□ 0.07
SCN8A-215ENST00000638820 KAT14Q9H8E8 782 aa15.52■□□□□ 0.07
SCN8A-215ENST00000638820 GPR75-ASB3A0A0A6YYF3 556 aa15.51■□□□□ 0.07
SCN8A-215ENST00000638820 FAM173BQ6P4H8 233 aa15.51■□□□□ 0.07
SCN8A-215ENST00000638820 ZSCAN10Q96SZ4 725 aaPredicted RBP15.51■□□□□ 0.07
SCN8A-215ENST00000638820 LLPHQ9BRT6 129 aaKnown RBP15.51■□□□□ 0.07
SCN8A-215ENST00000638820 SENP2Q9HC62 589 aa15.51■□□□□ 0.07
SCN8A-215ENST00000638820 ZMYM6O95789 1325 aa15.51■□□□□ 0.07
SCN8A-215ENST00000638820 PPP4CP60510 307 aa15.51■□□□□ 0.07
SCN8A-215ENST00000638820 SKOR2Q2VWA4 1001 aaPredicted RBP15.51■□□□□ 0.07
SCN8A-215ENST00000638820 CDC37L1Q7L3B6 337 aa15.51■□□□□ 0.07
SCN8A-215ENST00000638820 NSUN7Q8NE18 718 aaKnown RBP15.51■□□□□ 0.07
SCN8A-215ENST00000638820 VEZTQ9HBM0 779 aa15.51■□□□□ 0.07
SCN8A-215ENST00000638820 SUGT1Q9Y2Z0 365 aa15.51■□□□□ 0.07
SCN8A-215ENST00000638820 ZDHHC9Q9Y397 364 aa15.51■□□□□ 0.07
SCN8A-215ENST00000638820 IRS2Q9Y4H2 1338 aa15.5■□□□□ 0.07
SCN8A-215ENST00000638820 TGFB2P61812 414 aa15.5■□□□□ 0.07
SCN8A-215ENST00000638820 CSPP1Q1MSJ5 1256 aa15.5■□□□□ 0.07
SCN8A-215ENST00000638820 ZNF654Q8IZM8 581 aa15.5■□□□□ 0.07
SCN8A-215ENST00000638820 CMTR1Q8N1G2 835 aaKnown RBP15.5■□□□□ 0.07
SCN8A-215ENST00000638820 TFIP11Q9UBB9 837 aaKnown RBP15.5■□□□□ 0.07
SCN8A-215ENST00000638820 MYH13Q9UKX3 1938 aa15.5■□□□□ 0.07
SCN8A-215ENST00000638820 PDIA4P13667 645 aaKnown RBP15.5■□□□□ 0.07
SCN8A-215ENST00000638820 EVX2Q03828 476 aa15.5■□□□□ 0.07
SCN8A-215ENST00000638820 GJA3Q9Y6H8 435 aa15.5■□□□□ 0.07
SCN8A-215ENST00000638820 KRT85P78386 507 aa15.5■□□□□ 0.07
SCN8A-215ENST00000638820 SSRP1Q08945 709 aaKnown RBP15.5■□□□□ 0.07
SCN8A-215ENST00000638820 ST3GAL1Q11201 340 aa15.5■□□□□ 0.07
SCN8A-215ENST00000638820 OTUD7BQ6GQQ9 843 aa15.5■□□□□ 0.07
SCN8A-215ENST00000638820 PCP11498 1178 aaKnown RBP15.49■□□□□ 0.07
SCN8A-215ENST00000638820 PLCD1P51178 756 aa15.49■□□□□ 0.07
SCN8A-215ENST00000638820 DNM1Q05193 864 aaKnown RBP15.49■□□□□ 0.07
SCN8A-215ENST00000638820 C12orf60Q5U649 245 aa15.49■□□□□ 0.07
SCN8A-215ENST00000638820 LY9Q9HBG7 655 aa15.49■□□□□ 0.07
SCN8A-215ENST00000638820 MTMR6Q9Y217 621 aa15.49■□□□□ 0.07
SCN8A-215ENST00000638820 ZBTB12Q9Y330 459 aaPredicted RBP15.49■□□□□ 0.07
SCN8A-215ENST00000638820 NMT2O60551 498 aa15.49■□□□□ 0.07
SCN8A-215ENST00000638820 LIFRP42702 1097 aa15.49■□□□□ 0.07
SCN8A-215ENST00000638820 GRIPAP1Q4V328 841 aa15.49■□□□□ 0.07
SCN8A-215ENST00000638820 IGDCC4Q8TDY8 1250 aa15.49■□□□□ 0.07
SCN8A-215ENST00000638820 ALG1Q9BT22 464 aa15.49■□□□□ 0.07
SCN8A-215ENST00000638820 IGSF3O75054 1194 aa15.49■□□□□ 0.07
SCN8A-215ENST00000638820 DLGAP5Q15398 846 aa15.49■□□□□ 0.07
SCN8A-215ENST00000638820 SAFBQ15424 915 aaKnown RBP eCLIP15.49■□□□□ 0.07
SCN8A-215ENST00000638820 CNPY2Q9Y2B0 182 aa15.49■□□□□ 0.07
SCN8A-215ENST00000638820 FLT1P17948 1338 aa15.48■□□□□ 0.07
SCN8A-215ENST00000638820 SF3A1Q15459 793 aaKnown RBP15.48■□□□□ 0.07
SCN8A-215ENST00000638820 TDRD3Q9H7E2 651 aaKnown RBP15.48■□□□□ 0.07
SCN8A-215ENST00000638820 WDR19Q8NEZ3 1342 aa15.48■□□□□ 0.07
SCN8A-215ENST00000638820 CLRN2A0PK11 232 aa15.48■□□□□ 0.07
SCN8A-215ENST00000638820 CAVIN1Q6NZI2 390 aaKnown RBP15.48■□□□□ 0.07
SCN8A-215ENST00000638820 AGXT2Q9BYV1 514 aa15.48■□□□□ 0.07
SCN8A-215ENST00000638820 SPON1Q9HCB6 807 aa15.48■□□□□ 0.07
SCN8A-215ENST00000638820 EIF6P56537 245 aaKnown RBP15.47■□□□□ 0.07
SCN8A-215ENST00000638820 ANAPC4Q9UJX5 808 aa15.47■□□□□ 0.07
SCN8A-215ENST00000638820 BAZ2BQ9UIF8 2168 aaKnown RBP15.47■□□□□ 0.07
SCN8A-215ENST00000638820 CFAP100Q494V2 611 aa15.47■□□□□ 0.07
SCN8A-215ENST00000638820 SBK1Q52WX2 424 aa15.47■□□□□ 0.07
SCN8A-215ENST00000638820 ENAHQ8N8S7 591 aaPredicted RBP15.47■□□□□ 0.07
SCN8A-215ENST00000638820 NKX2-3Q8TAU0 364 aa15.47■□□□□ 0.07
SCN8A-215ENST00000638820 ARAP2Q8WZ64 1704 aa15.47■□□□□ 0.07
SCN8A-215ENST00000638820 MYO1BO43795 1136 aa15.47■□□□□ 0.07
SCN8A-215ENST00000638820 DACT2Q5SW24 774 aa15.47■□□□□ 0.07
SCN8A-215ENST00000638820 CDC42EP5Q6NZY7 148 aa15.47■□□□□ 0.07
SCN8A-215ENST00000638820 FANCBQ8NB91 859 aa15.47■□□□□ 0.07
SCN8A-215ENST00000638820 PSMD14O00487 310 aa15.46■□□□□ 0.07
SCN8A-215ENST00000638820 XBP1P17861 261 aa15.46■□□□□ 0.07
SCN8A-215ENST00000638820 ATP2B1P20020 1258 aa15.46■□□□□ 0.07
SCN8A-215ENST00000638820 CDK8P49336 464 aa15.46■□□□□ 0.07
SCN8A-215ENST00000638820 GSE1Q14687 1217 aa15.46■□□□□ 0.07
SCN8A-215ENST00000638820 ARHGAP27Q6ZUM4 889 aa15.46■□□□□ 0.07
SCN8A-215ENST00000638820 C7orf43Q8WVR3 580 aa15.46■□□□□ 0.07
SCN8A-215ENST00000638820 BAZ2AQ9UIF9 1905 aaKnown RBP15.46■□□□□ 0.07
SCN8A-215ENST00000638820 SLX4Q8IY92 1834 aa15.46■□□□□ 0.07
SCN8A-215ENST00000638820 hCG_1642624A0A1W2PR95 340 aa15.46■□□□□ 0.07
SCN8A-215ENST00000638820 HHIPL2Q6UWX4 724 aa15.46■□□□□ 0.07
SCN8A-215ENST00000638820 FAM163AQ96GL9 167 aaPredicted RBP15.46■□□□□ 0.07
SCN8A-215ENST00000638820 SERPINB13Q9UIV8 391 aa15.46■□□□□ 0.07
SCN8A-215ENST00000638820 ZNRF3Q9ULT6 936 aa15.46■□□□□ 0.07
SCN8A-215ENST00000638820 TCP10L2B9ZVM9 353 aa15.45■□□□□ 0.06
SCN8A-215ENST00000638820 WASF1Q92558 559 aa15.45■□□□□ 0.06
SCN8A-215ENST00000638820 CACNA1SQ13698 1873 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms