RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 PKNOX2Q96KN3 472 aa8.64□□□□□ -1.03
PKP4-217ENST00000628904 NYXQ9GZU5 481 aa8.64□□□□□ -1.03
PKP4-217ENST00000628904 ANO10Q9NW15 660 aa8.64□□□□□ -1.03
PKP4-217ENST00000628904 PYCARDQ9ULZ3 195 aa8.64□□□□□ -1.03
PKP4-217ENST00000628904 NRDCO43847 1150 aa8.63□□□□□ -1.03
PKP4-217ENST00000628904 EXOSC10Q01780 885 aaKnown RBP8.63□□□□□ -1.03
PKP4-217ENST00000628904 GRIN1Q05586 938 aa8.63□□□□□ -1.03
PKP4-217ENST00000628904 NOLC1Q14978 699 aaKnown RBP eCLIP8.63□□□□□ -1.03
PKP4-217ENST00000628904 PCDHB6Q9Y5E3 794 aa8.63□□□□□ -1.03
PKP4-217ENST00000628904 CCDC196A0A1B0GTZ2 297 aa8.63□□□□□ -1.03
PKP4-217ENST00000628904 FAM160A1Q05DH4 1040 aa8.63□□□□□ -1.03
PKP4-217ENST00000628904 RAD51AP2Q09MP3 1159 aa8.63□□□□□ -1.03
PKP4-217ENST00000628904 GRIK5Q16478 980 aa8.63□□□□□ -1.03
PKP4-217ENST00000628904 NOM1Q5C9Z4 860 aaKnown RBP8.63□□□□□ -1.03
PKP4-217ENST00000628904 CLSTN2Q9H4D0 955 aa8.63□□□□□ -1.03
PKP4-217ENST00000628904 SPATA31A5Q5VU36 1347 aa8.63□□□□□ -1.03
PKP4-217ENST00000628904 SPATA31A7Q8IWB4 1347 aa8.63□□□□□ -1.03
PKP4-217ENST00000628904 SH2B2O14492 632 aaPredicted RBP8.63□□□□□ -1.03
PKP4-217ENST00000628904 STX1AQ16623 288 aa8.63□□□□□ -1.03
PKP4-217ENST00000628904 JAKMIP3Q5VZ66 844 aa8.63□□□□□ -1.03
PKP4-217ENST00000628904 USP49Q70CQ1 688 aa8.63□□□□□ -1.03
PKP4-217ENST00000628904 SH3RF3Q8TEJ3 882 aaPredicted RBP8.63□□□□□ -1.03
PKP4-217ENST00000628904 ZSWIM4Q9H7M6 989 aa8.63□□□□□ -1.03
PKP4-217ENST00000628904 CNNM2Q9H8M5 875 aa8.63□□□□□ -1.03
PKP4-217ENST00000628904 CCDC194A0A1B0GVG4 234 aa8.62□□□□□ -1.03
PKP4-217ENST00000628904 AP5Z1O43299 807 aa8.62□□□□□ -1.03
PKP4-217ENST00000628904 BAG3O95817 575 aa8.62□□□□□ -1.03
PKP4-217ENST00000628904 SNAP25P60880 206 aa8.62□□□□□ -1.03
PKP4-217ENST00000628904 GJD4Q96KN9 370 aaPredicted RBP8.62□□□□□ -1.03
PKP4-217ENST00000628904 PXDNLA1KZ92 1463 aa8.62□□□□□ -1.03
PKP4-217ENST00000628904 RGPD5Q99666 1765 aa8.62□□□□□ -1.03
PKP4-217ENST00000628904 XRN1Q8IZH2 1706 aaKnown RBP8.62□□□□□ -1.03
PKP4-217ENST00000628904 KIF23Q02241 960 aaPredicted RBP8.62□□□□□ -1.03
PKP4-217ENST00000628904 LETM2Q2VYF4 491 aa8.62□□□□□ -1.03
PKP4-217ENST00000628904 USP17L2Q6R6M4 530 aa8.62□□□□□ -1.03
PKP4-217ENST00000628904 KCNG4Q8TDN1 519 aa8.62□□□□□ -1.03
PKP4-217ENST00000628904 GGA1Q9UJY5 639 aa8.62□□□□□ -1.03
PKP4-217ENST00000628904 ATP1A3P13637 1013 aa8.62□□□□□ -1.03
PKP4-217ENST00000628904 VEGFAP15692 232 aaPredicted RBP8.62□□□□□ -1.03
PKP4-217ENST00000628904 ZSCAN10Q96SZ4 725 aaPredicted RBP8.62□□□□□ -1.03
PKP4-217ENST00000628904 POLD4Q9HCU8 107 aa8.62□□□□□ -1.03
PKP4-217ENST00000628904 KCNH3Q9ULD8 1083 aa8.62□□□□□ -1.03
PKP4-217ENST00000628904 TTF2Q9UNY4 1162 aaKnown RBP8.62□□□□□ -1.03
PKP4-217ENST00000628904 HPS5Q9UPZ3 1129 aa8.62□□□□□ -1.03
PKP4-217ENST00000628904 WDHD1O75717 1129 aaPredicted RBP8.61□□□□□ -1.03
PKP4-217ENST00000628904 IDEP14735 1019 aa8.61□□□□□ -1.03
PKP4-217ENST00000628904 SLC16A2P36021 539 aa8.61□□□□□ -1.03
PKP4-217ENST00000628904 BTDP43251 543 aa8.61□□□□□ -1.03
PKP4-217ENST00000628904 SOGA3Q5TF21 947 aa8.61□□□□□ -1.03
PKP4-217ENST00000628904 ZNF804AQ7Z570 1209 aa8.61□□□□□ -1.03
PKP4-217ENST00000628904 EPSTI1Q96J88 318 aa8.61□□□□□ -1.03
PKP4-217ENST00000628904 LY9Q9HBG7 655 aa8.61□□□□□ -1.03
PKP4-217ENST00000628904 VEZTQ9HBM0 779 aa8.61□□□□□ -1.03
PKP4-217ENST00000628904 SERTAD1Q9UHV2 236 aa8.61□□□□□ -1.03
PKP4-217ENST00000628904 BCL9O00512 1426 aa8.61□□□□□ -1.03
PKP4-217ENST00000628904 FOXP2O15409 715 aa8.61□□□□□ -1.03
PKP4-217ENST00000628904 RPS6KA4O75676 772 aa8.61□□□□□ -1.03
PKP4-217ENST00000628904 SKILP12757 684 aa8.61□□□□□ -1.03
PKP4-217ENST00000628904 LINC00301Q8NCQ3 95 aa8.61□□□□□ -1.03
PKP4-217ENST00000628904 TMEM87BQ96K49 555 aa8.61□□□□□ -1.03
PKP4-217ENST00000628904 LLPHQ9BRT6 129 aaKnown RBP8.61□□□□□ -1.03
PKP4-217ENST00000628904 PRDM10Q9NQV6 1147 aa8.61□□□□□ -1.03
PKP4-217ENST00000628904 NAPAP54920 295 aa8.61□□□□□ -1.03
PKP4-217ENST00000628904 SPICE1Q8N0Z3 855 aa8.61□□□□□ -1.03
PKP4-217ENST00000628904 ENAHQ8N8S7 591 aaPredicted RBP8.61□□□□□ -1.03
PKP4-217ENST00000628904 LRRC4BQ9NT99 713 aa8.61□□□□□ -1.03
PKP4-217ENST00000628904 BSDC1Q9NW68 430 aaPredicted RBP8.61□□□□□ -1.03
PKP4-217ENST00000628904 NARFQ9UHQ1 456 aa8.61□□□□□ -1.03
PKP4-217ENST00000628904 TRIM75PA6NK02 468 aa8.6□□□□□ -1.03
PKP4-217ENST00000628904 MMP10P09238 476 aa8.6□□□□□ -1.03
PKP4-217ENST00000628904 TNNT1P13805 278 aa8.6□□□□□ -1.03
PKP4-217ENST00000628904 CCT6AP40227 531 aaKnown RBP8.6□□□□□ -1.03
PKP4-217ENST00000628904 LONRF3Q496Y0 759 aa8.6□□□□□ -1.03
PKP4-217ENST00000628904 STAG2Q8N3U4 1231 aa8.6□□□□□ -1.03
PKP4-217ENST00000628904 WASF1Q92558 559 aa8.6□□□□□ -1.03
PKP4-217ENST00000628904 ABCC12Q96J65 1359 aa8.6□□□□□ -1.03
PKP4-217ENST00000628904 SPDYE4A6NLX3 237 aa8.6□□□□□ -1.03
PKP4-217ENST00000628904 IGSF3O75054 1194 aa8.6□□□□□ -1.03
PKP4-217ENST00000628904 TNNI2P48788 182 aa8.6□□□□□ -1.03
PKP4-217ENST00000628904 UBASH3AP57075 661 aa8.6□□□□□ -1.03
PKP4-217ENST00000628904 DPP8Q6V1X1 898 aaPredicted RBP8.6□□□□□ -1.03
PKP4-217ENST00000628904 FNBP4Q8N3X1 1017 aaPredicted RBP8.6□□□□□ -1.03
PKP4-217ENST00000628904 NBPF3Q9H094 633 aa8.6□□□□□ -1.03
PKP4-217ENST00000628904 NOL7Q9UMY1 257 aaKnown RBP8.6□□□□□ -1.03
PKP4-217ENST00000628904 ZMYM6O95789 1325 aa8.6□□□□□ -1.03
PKP4-217ENST00000628904 GNAT2P19087 354 aa8.6□□□□□ -1.03
PKP4-217ENST00000628904 CHRNA5P30532 468 aa8.6□□□□□ -1.03
PKP4-217ENST00000628904 PLCD1P51178 756 aa8.6□□□□□ -1.03
PKP4-217ENST00000628904 DNA2P51530 1060 aa8.6□□□□□ -1.03
PKP4-217ENST00000628904 GPSM2P81274 684 aa8.6□□□□□ -1.03
PKP4-217ENST00000628904 UBE4AQ14139 1066 aa8.6□□□□□ -1.03
PKP4-217ENST00000628904 INF2Q27J81 1249 aa8.6□□□□□ -1.03
PKP4-217ENST00000628904 KRT27Q7Z3Y8 459 aa8.6□□□□□ -1.03
PKP4-217ENST00000628904 NOSTRINQ8IVI9 506 aa8.6□□□□□ -1.03
PKP4-217ENST00000628904 PNMA1Q8ND90 353 aa8.6□□□□□ -1.03
PKP4-217ENST00000628904 CHD2O14647 1828 aaKnown RBP8.6□□□□□ -1.03
PKP4-217ENST00000628904 CDHR2Q9BYE9 1310 aa8.6□□□□□ -1.03
PKP4-217ENST00000628904 SFPQP23246 707 aaKnown RBP eCLIP8.59□□□□□ -1.036e-7■□□□□ 10.9
PKP4-217ENST00000628904 CTR9Q6PD62 1173 aa8.59□□□□□ -1.03
PKP4-217ENST00000628904 IGDCC4Q8TDY8 1250 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms