RNA–Protein interactions for RNA: ENST00000617769.1

PCDHA13-203, Transcript of protocadherin alpha 13, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA13, Length 2,427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-203ENST00000617769 CYP7A1P22680 504 aa23.04■■□□□ 1.28
PCDHA13-203ENST00000617769 LMOD1P29536 600 aaPredicted RBP23.04■■□□□ 1.28
PCDHA13-203ENST00000617769 RC3H1Q5TC82 1133 aaKnown RBP23.04■■□□□ 1.28
PCDHA13-203ENST00000617769 ARMCX5Q6P1M9 558 aa23.04■■□□□ 1.28
PCDHA13-203ENST00000617769 SHC4Q6S5L8 630 aa23.04■■□□□ 1.28
PCDHA13-203ENST00000617769 NFXL1Q6ZNB6 911 aa23.04■■□□□ 1.28
PCDHA13-203ENST00000617769 NLRP3Q96P20 1036 aa23.04■■□□□ 1.28
PCDHA13-203ENST00000617769 ZBTB43O43298 467 aa23.03■■□□□ 1.28
PCDHA13-203ENST00000617769 NTRK3Q16288 839 aa23.03■■□□□ 1.28
PCDHA13-203ENST00000617769 RRP12Q5JTH9 1297 aaKnown RBP23.03■■□□□ 1.28
PCDHA13-203ENST00000617769 CPLX2Q6PUV4 134 aaKnown RBP23.03■■□□□ 1.28
PCDHA13-203ENST00000617769 TFCP2L1Q9NZI6 479 aa23.03■■□□□ 1.28
PCDHA13-203ENST00000617769 NPHP1O15259 732 aa23.03■■□□□ 1.28
PCDHA13-203ENST00000617769 RANBP6O60518 1105 aaKnown RBP23.03■■□□□ 1.28
PCDHA13-203ENST00000617769 PTPAQ15257 358 aa23.03■■□□□ 1.28
PCDHA13-203ENST00000617769 SDR42E1Q8WUS8 393 aa23.03■■□□□ 1.28
PCDHA13-203ENST00000617769 TDO2P48775 406 aa23.02■■□□□ 1.28
PCDHA13-203ENST00000617769 TPM4P67936 248 aa23.02■■□□□ 1.28
PCDHA13-203ENST00000617769 SLC10A5Q5PT55 438 aa23.02■■□□□ 1.28
PCDHA13-203ENST00000617769 TMEM87BQ96K49 555 aa23.02■■□□□ 1.28
PCDHA13-203ENST00000617769 FAM84BQ96KN1 310 aaPredicted RBP23.02■■□□□ 1.28
PCDHA13-203ENST00000617769 MAP3K14Q99558 947 aa23.02■■□□□ 1.28
PCDHA13-203ENST00000617769 LY9Q9HBG7 655 aa23.02■■□□□ 1.28
PCDHA13-203ENST00000617769 TOMM22Q9NS69 142 aa23.02■■□□□ 1.28
PCDHA13-203ENST00000617769 JAG2Q9Y219 1238 aa23.02■■□□□ 1.28
PCDHA13-203ENST00000617769 HPSEQ9Y251 543 aa23.02■■□□□ 1.28
PCDHA13-203ENST00000617769 COL1A1P02452 1464 aaPredicted RBP23.02■■□□□ 1.28
PCDHA13-203ENST00000617769 LAMB2P55268 1798 aa23.02■■□□□ 1.28
PCDHA13-203ENST00000617769 ATP1A3P13637 1013 aa23.02■■□□□ 1.28
PCDHA13-203ENST00000617769 ZSCAN20P17040 1043 aaPredicted RBP23.02■■□□□ 1.28
PCDHA13-203ENST00000617769 IARSP41252 1262 aaKnown RBP23.02■■□□□ 1.28
PCDHA13-203ENST00000617769 RPS8P62241 208 aaKnown RBP23.02■■□□□ 1.28
PCDHA13-203ENST00000617769 E4F1Q66K89 784 aaPredicted RBP23.02■■□□□ 1.28
PCDHA13-203ENST00000617769 CLIC6Q96NY7 704 aa23.02■■□□□ 1.28
PCDHA13-203ENST00000617769 ZKSCAN3Q9BRR0 538 aa23.02■■□□□ 1.28
PCDHA13-203ENST00000617769 FAM217BQ9NTX9 383 aaPredicted RBP23.02■■□□□ 1.28
PCDHA13-203ENST00000617769 ZNF215Q9UL58 517 aaPredicted RBP23.02■■□□□ 1.28
PCDHA13-203ENST00000617769 SPATA31A6Q5VVP1 1343 aa23.01■■□□□ 1.27
PCDHA13-203ENST00000617769 PPP6R2O75170 966 aa23.01■■□□□ 1.27
PCDHA13-203ENST00000617769 TMEM67Q5HYA8 995 aa23.01■■□□□ 1.27
PCDHA13-203ENST00000617769 TIGD1Q96MW7 591 aa23.01■■□□□ 1.27
PCDHA13-203ENST00000617769 KCND1Q9NSA2 647 aa23.01■■□□□ 1.27
PCDHA13-203ENST00000617769 ZSWIM5Q9P217 1185 aa23.01■■□□□ 1.27
PCDHA13-203ENST00000617769 PRDM4Q9UKN5 801 aa23.01■■□□□ 1.27
PCDHA13-203ENST00000617769 AFF2P51816 1311 aa23.01■■□□□ 1.27
PCDHA13-203ENST00000617769 GOLGA8AA7E2F4 631 aa23.01■■□□□ 1.27
PCDHA13-203ENST00000617769 SFPQP23246 707 aaKnown RBP eCLIP23.01■■□□□ 1.27
PCDHA13-203ENST00000617769 PNOCQ13519 176 aa23.01■■□□□ 1.27
PCDHA13-203ENST00000617769 FAM196AQ6ZSG2 479 aa23.01■■□□□ 1.27
PCDHA13-203ENST00000617769 JMYQ8N9B5 988 aa23.01■■□□□ 1.27
PCDHA13-203ENST00000617769 RGS22Q8NE09 1264 aa23.01■■□□□ 1.27
PCDHA13-203ENST00000617769 HSD3B7Q9H2F3 369 aa23.01■■□□□ 1.27
PCDHA13-203ENST00000617769 ZNF804BA4D1E1 1349 aa23■■□□□ 1.27
PCDHA13-203ENST00000617769 HSPA1LP34931 641 aa23■■□□□ 1.27
PCDHA13-203ENST00000617769 UBE4AQ14139 1066 aa23■■□□□ 1.27
PCDHA13-203ENST00000617769 CAVIN4Q5BKX8 364 aa23■■□□□ 1.27
PCDHA13-203ENST00000617769 TPTE2Q6XPS3 522 aa23■■□□□ 1.27
PCDHA13-203ENST00000617769 TUBE1Q9UJT0 475 aa23■■□□□ 1.27
PCDHA13-203ENST00000617769 RFC4P35249 363 aa23■■□□□ 1.27
PCDHA13-203ENST00000617769 FANCCQ00597 558 aa23■■□□□ 1.27
PCDHA13-203ENST00000617769 SGMS1Q86VZ5 419 aa23■■□□□ 1.27
PCDHA13-203ENST00000617769 CCDC150Q8NCX0 1101 aa23■■□□□ 1.27
PCDHA13-203ENST00000617769 NYXQ9GZU5 481 aa23■■□□□ 1.27
PCDHA13-203ENST00000617769 LRRC4BQ9NT99 713 aa23■■□□□ 1.27
PCDHA13-203ENST00000617769 IKBKBO14920 756 aa22.99■■□□□ 1.27
PCDHA13-203ENST00000617769 TRIM29Q14134 588 aa22.99■■□□□ 1.27
PCDHA13-203ENST00000617769 ALX1Q15699 326 aa22.99■■□□□ 1.27
PCDHA13-203ENST00000617769 SEPT12Q8IYM1 358 aa22.99■■□□□ 1.27
PCDHA13-203ENST00000617769 KIF18AQ8NI77 898 aa22.99■■□□□ 1.27
PCDHA13-203ENST00000617769 GNL3LQ9NVN8 582 aaKnown RBP22.99■■□□□ 1.27
PCDHA13-203ENST00000617769 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.99■■□□□ 1.27
PCDHA13-203ENST00000617769 V9GYY5 206 aaPredicted RBP22.99■■□□□ 1.27
PCDHA13-203ENST00000617769 DYNLL1P63167 89 aaKnown RBP22.99■■□□□ 1.27
PCDHA13-203ENST00000617769 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.99■■□□□ 1.27
PCDHA13-203ENST00000617769 SLC26A6Q9BXS9 759 aa22.99■■□□□ 1.27
PCDHA13-203ENST00000617769 MINDY4BA8MYZ0 360 aa22.98■■□□□ 1.27
PCDHA13-203ENST00000617769 RESP18Q5W5W9 173 aa22.98■■□□□ 1.27
PCDHA13-203ENST00000617769 SLC12A7Q9Y666 1083 aa22.98■■□□□ 1.27
PCDHA13-203ENST00000617769 DOCK2Q92608 1830 aa22.98■■□□□ 1.27
PCDHA13-203ENST00000617769 IFIT3O14879 490 aaKnown RBP22.98■■□□□ 1.27
PCDHA13-203ENST00000617769 TXNRD3Q86VQ6 643 aa22.98■■□□□ 1.27
PCDHA13-203ENST00000617769 ZNF384Q8TF68 577 aa22.98■■□□□ 1.27
PCDHA13-203ENST00000617769 CGNQ9P2M7 1197 aaKnown RBP22.98■■□□□ 1.27
PCDHA13-203ENST00000617769 ECM29Q5VYK3 1845 aa22.98■■□□□ 1.27
PCDHA13-203ENST00000617769 LONRF3Q496Y0 759 aa22.97■■□□□ 1.27
PCDHA13-203ENST00000617769 AKNAD1Q5T1N1 836 aa22.97■■□□□ 1.27
PCDHA13-203ENST00000617769 TRAPPC3LQ5T215 181 aa22.97■■□□□ 1.27
PCDHA13-203ENST00000617769 MFSD6Q6ZSS7 791 aa22.97■■□□□ 1.27
PCDHA13-203ENST00000617769 PPP1R13BQ96KQ4 1090 aa22.97■■□□□ 1.27
PCDHA13-203ENST00000617769 ZNF831Q5JPB2 1677 aa22.97■■□□□ 1.27
PCDHA13-203ENST00000617769 METTL16Q86W50 562 aaKnown RBP22.97■■□□□ 1.27
PCDHA13-203ENST00000617769 FEZ1Q99689 392 aa22.97■■□□□ 1.27
PCDHA13-203ENST00000617769 NACAP1Q9BZK3 213 aa22.97■■□□□ 1.27
PCDHA13-203ENST00000617769 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.97■■□□□ 1.27
PCDHA13-203ENST00000617769 SCN7AQ01118 1682 aa22.96■■□□□ 1.27
PCDHA13-203ENST00000617769 CYP2D7A0A087X1C5 515 aa22.96■■□□□ 1.27
PCDHA13-203ENST00000617769 MAGEB6P1A0A0J9YX57 407 aa22.96■■□□□ 1.27
PCDHA13-203ENST00000617769 TM4SF1P30408 202 aa22.96■■□□□ 1.27
PCDHA13-203ENST00000617769 LIFRP42702 1097 aa22.96■■□□□ 1.27
PCDHA13-203ENST00000617769 DPF2Q92785 391 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms