RNA–Protein interactions for RNA: ENST00000616315.1

NEAT1-205, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 483 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-205ENST00000616315 FLAD1Q8NFF5 587 aa6.92□□□□□ -1.3
NEAT1-205ENST00000616315 FBF1Q8TES7 1133 aa6.92□□□□□ -1.3
NEAT1-205ENST00000616315 FAM161BQ96MY7 647 aa6.92□□□□□ -1.3
NEAT1-205ENST00000616315 CSRNP1Q96S65 589 aa6.92□□□□□ -1.3
NEAT1-205ENST00000616315 SETDB2Q96T68 719 aa6.92□□□□□ -1.3
NEAT1-205ENST00000616315 TMEM265A0A087WTH1 108 aa6.91□□□□□ -1.3
NEAT1-205ENST00000616315 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.91□□□□□ -1.3
NEAT1-205ENST00000616315 SORBS3O60504 671 aa6.91□□□□□ -1.3
NEAT1-205ENST00000616315 GSTP1P09211 210 aaKnown RBP6.91□□□□□ -1.3
NEAT1-205ENST00000616315 ZNF865P0CJ78 1059 aaPredicted RBP6.91□□□□□ -1.3
NEAT1-205ENST00000616315 ITIH2P19823 946 aa6.91□□□□□ -1.3
NEAT1-205ENST00000616315 DAB2P98082 770 aa6.91□□□□□ -1.3
NEAT1-205ENST00000616315 ANGEL2Q5VTE6 544 aaKnown RBP6.91□□□□□ -1.3
NEAT1-205ENST00000616315 FAM214BQ7L5A3 538 aa6.91□□□□□ -1.3
NEAT1-205ENST00000616315 HEXIM2Q96MH2 286 aaKnown RBP6.91□□□□□ -1.3
NEAT1-205ENST00000616315 BACH2Q9BYV9 841 aa6.91□□□□□ -1.3
NEAT1-205ENST00000616315 DNAJC25Q9H1X3 360 aa6.91□□□□□ -1.3
NEAT1-205ENST00000616315 TNKS2Q9H2K2 1166 aa6.91□□□□□ -1.3
NEAT1-205ENST00000616315 PCOLCE2Q9UKZ9 415 aa6.91□□□□□ -1.3
NEAT1-205ENST00000616315 TMEM238LA0A1B0GVL6 79 aa6.9□□□□□ -1.3
NEAT1-205ENST00000616315 EIF1AYO14602 144 aaKnown RBP6.9□□□□□ -1.3
NEAT1-205ENST00000616315 SCAMP3O14828 347 aaKnown RBP6.9□□□□□ -1.3
NEAT1-205ENST00000616315 IGSF3O75054 1194 aa6.9□□□□□ -1.3
NEAT1-205ENST00000616315 CFPP27918 469 aa6.9□□□□□ -1.3
NEAT1-205ENST00000616315 GNA15P30679 374 aa6.9□□□□□ -1.3
NEAT1-205ENST00000616315 MLANAQ16655 118 aa6.9□□□□□ -1.3
NEAT1-205ENST00000616315 KRTAP19-4Q3LI73 84 aa6.9□□□□□ -1.3
NEAT1-205ENST00000616315 RPS26P11Q5JNZ5 115 aaPredicted RBP6.9□□□□□ -1.3
NEAT1-205ENST00000616315 PRPF40BQ6NWY9 871 aaKnown RBP6.9□□□□□ -1.3
NEAT1-205ENST00000616315 ARHGAP27Q6ZUM4 889 aa6.9□□□□□ -1.3
NEAT1-205ENST00000616315 ZSWIM9Q86XI8 627 aa6.9□□□□□ -1.3
NEAT1-205ENST00000616315 TOP6BLQ8N6T0 577 aa6.9□□□□□ -1.3
NEAT1-205ENST00000616315 VTI1BQ9UEU0 232 aa6.9□□□□□ -1.3
NEAT1-205ENST00000616315 CPNE3O75131 537 aaKnown RBP6.89□□□□□ -1.31
NEAT1-205ENST00000616315 PDZD3Q86UT5 571 aa6.89□□□□□ -1.31
NEAT1-205ENST00000616315 C1QL4Q86Z23 238 aa6.89□□□□□ -1.31
NEAT1-205ENST00000616315 BHLHE22Q8NFJ8 381 aaPredicted RBP6.89□□□□□ -1.31
NEAT1-205ENST00000616315 ISL2Q96A47 359 aa6.89□□□□□ -1.31
NEAT1-205ENST00000616315 KRTAP4-5Q9BYR2 181 aa6.89□□□□□ -1.31
NEAT1-205ENST00000616315 KRT82Q9NSB4 513 aa6.89□□□□□ -1.31
NEAT1-205ENST00000616315 RNF19AQ9NV58 838 aa6.89□□□□□ -1.31
NEAT1-205ENST00000616315 FYB2Q5VWT5 728 aa6.88□□□□□ -1.31
NEAT1-205ENST00000616315 LCNL1Q6ZST4 164 aa6.88□□□□□ -1.31
NEAT1-205ENST00000616315 LIN37Q96GY3 246 aaPredicted RBP6.88□□□□□ -1.31
NEAT1-205ENST00000616315 FRMD6Q96NE9 622 aa6.88□□□□□ -1.31
NEAT1-205ENST00000616315 KCNMB1Q16558 191 aa6.87□□□□□ -1.31
NEAT1-205ENST00000616315 TMEM87AQ8NBN3 555 aa6.87□□□□□ -1.31
NEAT1-205ENST00000616315 STK35Q8TDR2 534 aa6.87□□□□□ -1.31
NEAT1-205ENST00000616315 CCDC74AQ96AQ1 378 aa6.87□□□□□ -1.31
NEAT1-205ENST00000616315 C8orf37Q96NL8 207 aa6.87□□□□□ -1.31
NEAT1-205ENST00000616315 SPG7Q9UQ90 795 aa6.87□□□□□ -1.31
NEAT1-205ENST00000616315 CTNND2Q9UQB3 1225 aa6.87□□□□□ -1.31
NEAT1-205ENST00000616315 SNX11Q9Y5W9 270 aa6.87□□□□□ -1.31
NEAT1-205ENST00000616315 RAP1GAPP47736 663 aa6.86□□□□□ -1.31
NEAT1-205ENST00000616315 HDLBPQ00341 1268 aaKnown RBP6.86□□□□□ -1.31
NEAT1-205ENST00000616315 ZP2Q05996 745 aa6.86□□□□□ -1.31
NEAT1-205ENST00000616315 GRM2Q14416 872 aa6.86□□□□□ -1.31
NEAT1-205ENST00000616315 ZC3H12AQ5D1E8 599 aaKnown RBP6.86□□□□□ -1.31
NEAT1-205ENST00000616315 LDLRAD1Q5T700 205 aa6.86□□□□□ -1.31
NEAT1-205ENST00000616315 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.86□□□□□ -1.31
NEAT1-205ENST00000616315 KCNB2Q92953 911 aa6.86□□□□□ -1.31
NEAT1-205ENST00000616315 FAM53CQ9NYF3 392 aa6.86□□□□□ -1.31
NEAT1-205ENST00000616315 GADD45BO75293 160 aaPredicted RBP6.85□□□□□ -1.31
NEAT1-205ENST00000616315 ZC3H6P61129 1189 aaKnown RBP6.85□□□□□ -1.31
NEAT1-205ENST00000616315 IKZF1Q13422 519 aa6.85□□□□□ -1.31
NEAT1-205ENST00000616315 SPACA3Q8IXA5 215 aa6.85□□□□□ -1.31
NEAT1-205ENST00000616315 CRELD1Q96HD1 420 aa6.85□□□□□ -1.31
NEAT1-205ENST00000616315 SSU72Q9NP77 194 aaKnown RBP6.85□□□□□ -1.31
NEAT1-205ENST00000616315 METTL5Q9NRN9 209 aaKnown RBP6.85□□□□□ -1.31
NEAT1-205ENST00000616315 USP35Q9P2H5 1018 aa6.85□□□□□ -1.31
NEAT1-205ENST00000616315 TSPAN15O95858 294 aa6.84□□□□□ -1.31
NEAT1-205ENST00000616315 ERCC5P28715 1186 aaPredicted RBP6.84□□□□□ -1.31
NEAT1-205ENST00000616315 NKPD1Q17RQ9 610 aa6.84□□□□□ -1.31
NEAT1-205ENST00000616315 LCE5AQ5TCM9 118 aa6.84□□□□□ -1.31
NEAT1-205ENST00000616315 PRR23BQ6ZRT6 265 aa6.84□□□□□ -1.31
NEAT1-205ENST00000616315 RNF214Q8ND24 703 aa6.84□□□□□ -1.31
NEAT1-205ENST00000616315 EPS8L3Q8TE67 593 aaKnown RBP6.84□□□□□ -1.31
NEAT1-205ENST00000616315 ASB11Q8WXH4 323 aa6.84□□□□□ -1.31
NEAT1-205ENST00000616315 TOX2Q96NM4 488 aa6.84□□□□□ -1.31
NEAT1-205ENST00000616315 AK5Q9Y6K8 562 aa6.84□□□□□ -1.31
NEAT1-205ENST00000616315 KRT1P04264 644 aa6.83□□□□□ -1.32
NEAT1-205ENST00000616315 EIF4BP23588 611 aaKnown RBP6.83□□□□□ -1.32
NEAT1-205ENST00000616315 FANCCQ00597 558 aa6.83□□□□□ -1.32
NEAT1-205ENST00000616315 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.83□□□□□ -1.32
NEAT1-205ENST00000616315 UBE3DQ7Z6J8 389 aa6.83□□□□□ -1.32
NEAT1-205ENST00000616315 LRRC56Q8IYG6 542 aaPredicted RBP6.83□□□□□ -1.32
NEAT1-205ENST00000616315 NLRP2Q9NX02 1062 aa6.83□□□□□ -1.32
NEAT1-205ENST00000616315 IGF2BP3O00425 579 aaKnown RBP eCLIP6.82□□□□□ -1.32
NEAT1-205ENST00000616315 GIPC1O14908 333 aa6.82□□□□□ -1.32
NEAT1-205ENST00000616315 NTF4P34130 210 aa6.82□□□□□ -1.32
NEAT1-205ENST00000616315 ZNF76P36508 570 aa6.82□□□□□ -1.32
NEAT1-205ENST00000616315 ERVK-24P63145 666 aa6.82□□□□□ -1.32
NEAT1-205ENST00000616315 MPRIPQ6WCQ1 1025 aa6.82□□□□□ -1.32
NEAT1-205ENST00000616315 SYDE1Q6ZW31 735 aaPredicted RBP6.82□□□□□ -1.32
NEAT1-205ENST00000616315 RNF34Q969K3 372 aa6.82□□□□□ -1.32
NEAT1-205ENST00000616315 C12orf49Q9H741 205 aa6.82□□□□□ -1.32
NEAT1-205ENST00000616315 TMEM39AQ9NV64 488 aa6.82□□□□□ -1.32
NEAT1-205ENST00000616315 GPN3Q9UHW5 284 aaPredicted RBP6.82□□□□□ -1.32
NEAT1-205ENST00000616315 TRAK1Q9UPV9 953 aa6.82□□□□□ -1.32
NEAT1-205ENST00000616315 PITPNM2Q9BZ72 1349 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms