RNA–Protein interactions for RNA: ENST00000615317.4

MMP28-205, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-205ENST00000615317 PPP2R3BQ9Y5P8 575 aa10.84□□□□□ -0.67
MMP28-205ENST00000615317 PTPRFP10586 1907 aa10.84□□□□□ -0.67
MMP28-205ENST00000615317 TRAF5O00463 557 aa10.83□□□□□ -0.68
MMP28-205ENST00000615317 HSPA4P34932 840 aa10.83□□□□□ -0.68
MMP28-205ENST00000615317 ALX1Q15699 326 aa10.83□□□□□ -0.68
MMP28-205ENST00000615317 USP48Q86UV5 1035 aa10.83□□□□□ -0.68
MMP28-205ENST00000615317 CRACR2BQ8N4Y2 399 aaPredicted RBP10.83□□□□□ -0.68
MMP28-205ENST00000615317 ZNF784Q8NCA9 323 aaPredicted RBP10.83□□□□□ -0.68
MMP28-205ENST00000615317 CDCA5Q96FF9 252 aa10.83□□□□□ -0.68
MMP28-205ENST00000615317 TRIM34Q9BYJ4 488 aa10.83□□□□□ -0.68
MMP28-205ENST00000615317 DNAJC18Q9H819 358 aa10.83□□□□□ -0.68
MMP28-205ENST00000615317 UPF2Q9HAU5 1272 aaKnown RBP10.83□□□□□ -0.68
MMP28-205ENST00000615317 CTNNA3Q9UI47 895 aa10.83□□□□□ -0.68
MMP28-205ENST00000615317 FZD1Q9UP38 647 aa10.83□□□□□ -0.68
MMP28-205ENST00000615317 EIF5BO60841 1220 aaKnown RBP10.82□□□□□ -0.68
MMP28-205ENST00000615317 PRDM1O75626 825 aa10.82□□□□□ -0.68
MMP28-205ENST00000615317 FMR1Q06787 632 aaKnown RBP eCLIP10.82□□□□□ -0.68
MMP28-205ENST00000615317 SBK1Q52WX2 424 aa10.82□□□□□ -0.68
MMP28-205ENST00000615317 NBPF12Q5TAG4 269 aaPredicted RBP10.82□□□□□ -0.68
MMP28-205ENST00000615317 C12orf60Q5U649 245 aa10.82□□□□□ -0.68
MMP28-205ENST00000615317 CHADLQ6NUI6 762 aa10.82□□□□□ -0.68
MMP28-205ENST00000615317 STOX1Q6ZVD7 989 aa10.82□□□□□ -0.68
MMP28-205ENST00000615317 TTC6Q86TZ1 520 aa10.82□□□□□ -0.68
MMP28-205ENST00000615317 USP26Q9BXU7 913 aa10.82□□□□□ -0.68
MMP28-205ENST00000615317 DHX36Q9H2U1 1008 aaKnown RBP10.82□□□□□ -0.68
MMP28-205ENST00000615317 ZNF408Q9H9D4 720 aa10.82□□□□□ -0.68
MMP28-205ENST00000615317 TOMM22Q9NS69 142 aa10.82□□□□□ -0.68
MMP28-205ENST00000615317 SERPINB13Q9UIV8 391 aa10.82□□□□□ -0.68
MMP28-205ENST00000615317 TACC3Q9Y6A5 838 aa10.82□□□□□ -0.68
MMP28-205ENST00000615317 ZNF213O14771 459 aa10.81□□□□□ -0.68
MMP28-205ENST00000615317 PRKG1Q13976 671 aa10.81□□□□□ -0.68
MMP28-205ENST00000615317 NECTIN1Q15223 517 aa10.81□□□□□ -0.68
MMP28-205ENST00000615317 RRP12Q5JTH9 1297 aaKnown RBP10.81□□□□□ -0.68
MMP28-205ENST00000615317 RNF20Q5VTR2 975 aa10.81□□□□□ -0.68
MMP28-205ENST00000615317 C16orf86Q6ZW13 317 aa10.81□□□□□ -0.68
MMP28-205ENST00000615317 CDC37L1Q7L3B6 337 aa10.81□□□□□ -0.68
MMP28-205ENST00000615317 MIGA2Q7L4E1 593 aa10.81□□□□□ -0.68
MMP28-205ENST00000615317 RASEFQ8IZ41 740 aa10.81□□□□□ -0.68
MMP28-205ENST00000615317 STAG1Q8WVM7 1258 aa10.81□□□□□ -0.68
MMP28-205ENST00000615317 EHD4Q9H223 541 aa10.81□□□□□ -0.68
MMP28-205ENST00000615317 PGAP2Q9UHJ9 254 aa10.81□□□□□ -0.68
MMP28-205ENST00000615317 LOC285556D6RIA3 1793 aa10.8□□□□□ -0.68
MMP28-205ENST00000615317 EPB41L2O43491 1005 aaKnown RBP10.8□□□□□ -0.68
MMP28-205ENST00000615317 GDF11O95390 407 aa10.8□□□□□ -0.68
MMP28-205ENST00000615317 SLC3A2P08195 630 aaKnown RBP10.8□□□□□ -0.68
MMP28-205ENST00000615317 SHMT1P34896 483 aa10.8□□□□□ -0.68
MMP28-205ENST00000615317 GABPAQ06546 454 aa10.8□□□□□ -0.68
MMP28-205ENST00000615317 SHROOM1Q2M3G4 852 aaPredicted RBP10.8□□□□□ -0.68
MMP28-205ENST00000615317 NKX2-3Q8TAU0 364 aa10.8□□□□□ -0.68
MMP28-205ENST00000615317 C22orf23Q9BZE7 217 aa10.8□□□□□ -0.68
MMP28-205ENST00000615317 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.8□□□□□ -0.68
MMP28-205ENST00000615317 INCENPQ9NQS7 918 aa10.8□□□□□ -0.68
MMP28-205ENST00000615317 PI4KBQ9UBF8 816 aa10.8□□□□□ -0.68
MMP28-205ENST00000615317 ANAPC4Q9UJX5 808 aa10.8□□□□□ -0.68
MMP28-205ENST00000615317 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.8□□□□□ -0.68
MMP28-205ENST00000615317 SNX14Q9Y5W7 946 aa10.8□□□□□ -0.68
MMP28-205ENST00000615317 B4E1Z4 1266 aa10.79□□□□□ -0.68
MMP28-205ENST00000615317 E7EWF7 191 aa10.79□□□□□ -0.68
MMP28-205ENST00000615317 ZKSCAN1P17029 563 aaPredicted RBP10.79□□□□□ -0.68
MMP28-205ENST00000615317 NF2P35240 595 aa10.79□□□□□ -0.68
MMP28-205ENST00000615317 CDK8P49336 464 aa10.79□□□□□ -0.68
MMP28-205ENST00000615317 COL9A3Q14050 684 aaPredicted RBP10.79□□□□□ -0.68
MMP28-205ENST00000615317 ADCK5Q3MIX3 580 aa10.79□□□□□ -0.68
MMP28-205ENST00000615317 AKNAD1Q5T1N1 836 aa10.79□□□□□ -0.68
MMP28-205ENST00000615317 DCAF15Q66K64 600 aa10.79□□□□□ -0.68
MMP28-205ENST00000615317 RALYLQ86SE5 291 aaKnown RBP10.79□□□□□ -0.68
MMP28-205ENST00000615317 JAKMIP1Q96N16 626 aaKnown RBP10.79□□□□□ -0.68
MMP28-205ENST00000615317 TBC1D32Q96NH3 1257 aa10.79□□□□□ -0.68
MMP28-205ENST00000615317 RNF41Q9H4P4 317 aaPredicted RBP10.79□□□□□ -0.68
MMP28-205ENST00000615317 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.79□□□□□ -0.68
MMP28-205ENST00000615317 SWAP70Q9UH65 585 aa10.79□□□□□ -0.68
MMP28-205ENST00000615317 HERC5Q9UII4 1024 aaKnown RBP10.79□□□□□ -0.68
MMP28-205ENST00000615317 PLIN4Q96Q06 1357 aa10.78□□□□□ -0.68
MMP28-205ENST00000615317 MPHOSPH10O00566 681 aaKnown RBP10.78□□□□□ -0.68
MMP28-205ENST00000615317 AKR1B1P15121 316 aa10.78□□□□□ -0.68
MMP28-205ENST00000615317 RASA1P20936 1047 aa10.78□□□□□ -0.68
MMP28-205ENST00000615317 PDE4BQ07343 736 aa10.78□□□□□ -0.68
MMP28-205ENST00000615317 TTLL12Q14166 644 aaPredicted RBP10.78□□□□□ -0.68
MMP28-205ENST00000615317 RRP1BQ14684 758 aaKnown RBP10.78□□□□□ -0.68
MMP28-205ENST00000615317 MFSD6Q6ZSS7 791 aa10.78□□□□□ -0.68
MMP28-205ENST00000615317 MOB2Q70IA6 237 aa10.78□□□□□ -0.68
MMP28-205ENST00000615317 CLEC10AQ8IUN9 316 aa10.78□□□□□ -0.68
MMP28-205ENST00000615317 SMC1BQ8NDV3 1235 aa10.78□□□□□ -0.68
MMP28-205ENST00000615317 HOOK2Q96ED9 719 aa10.78□□□□□ -0.68
MMP28-205ENST00000615317 WRNIP1Q96S55 665 aa10.78□□□□□ -0.68
MMP28-205ENST00000615317 ZNF341Q9BYN7 854 aa10.78□□□□□ -0.68
MMP28-205ENST00000615317 PARP14Q460N5 1801 aa10.77□□□□□ -0.68
MMP28-205ENST00000615317 TSPY2A6NKD2 308 aa10.77□□□□□ -0.69
MMP28-205ENST00000615317 ORC4O43929 436 aa10.77□□□□□ -0.69
MMP28-205ENST00000615317 RANBP6O60518 1105 aaKnown RBP10.77□□□□□ -0.69
MMP28-205ENST00000615317 KDM4AO75164 1064 aa10.77□□□□□ -0.69
MMP28-205ENST00000615317 CELF2O95319 508 aaKnown RBP10.77□□□□□ -0.69
MMP28-205ENST00000615317 CPA1P15085 419 aa10.77□□□□□ -0.69
MMP28-205ENST00000615317 CASTP20810 708 aaKnown RBP10.77□□□□□ -0.69
MMP28-205ENST00000615317 INPP5BP32019 993 aa10.77□□□□□ -0.69
MMP28-205ENST00000615317 RBM25P49756 843 aaKnown RBP10.77□□□□□ -0.69
MMP28-205ENST00000615317 TRDNQ13061 729 aa10.77□□□□□ -0.69
MMP28-205ENST00000615317 KRT32Q14532 448 aa10.77□□□□□ -0.69
MMP28-205ENST00000615317 SUPT20HL1Q3ZLR7 823 aa10.77□□□□□ -0.69
MMP28-205ENST00000615317 FAM47AQ5JRC9 791 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms