RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 OLFM4Q6UX06 510 aa10.53□□□□□ -0.72
CCDC47-207ENST00000612558 RALYLQ86SE5 291 aaKnown RBP10.53□□□□□ -0.72
CCDC47-207ENST00000612558 LRCH3Q96II8 777 aa10.53□□□□□ -0.72
CCDC47-207ENST00000612558 AGXT2Q9BYV1 514 aa10.53□□□□□ -0.72
CCDC47-207ENST00000612558 WBP1LQ9NX94 342 aa10.53□□□□□ -0.72
CCDC47-207ENST00000612558 TSR3Q9UJK0 312 aaKnown RBP10.53□□□□□ -0.72
CCDC47-207ENST00000612558 FAM205AQ6ZU69 1335 aa10.53□□□□□ -0.72
CCDC47-207ENST00000612558 SLX4Q8IY92 1834 aa10.53□□□□□ -0.72
CCDC47-207ENST00000612558 C10orf71Q711Q0 1435 aa10.52□□□□□ -0.72
CCDC47-207ENST00000612558 WDR19Q8NEZ3 1342 aa10.52□□□□□ -0.72
CCDC47-207ENST00000612558 LDHCP07864 332 aa10.52□□□□□ -0.72
CCDC47-207ENST00000612558 DYNLL1P63167 89 aaKnown RBP10.52□□□□□ -0.72
CCDC47-207ENST00000612558 CAMK2BQ13554 666 aa10.52□□□□□ -0.72
CCDC47-207ENST00000612558 MB21D2Q8IYB1 491 aaPredicted RBP10.52□□□□□ -0.72
CCDC47-207ENST00000612558 C7orf43Q8WVR3 580 aa10.52□□□□□ -0.72
CCDC47-207ENST00000612558 TNPO1Q92973 898 aaKnown RBP10.52□□□□□ -0.72
CCDC47-207ENST00000612558 DUOX1Q9NRD9 1551 aa10.52□□□□□ -0.73
CCDC47-207ENST00000612558 GRIPAP1Q4V328 841 aa10.52□□□□□ -0.73
CCDC47-207ENST00000612558 MFSD14BQ5SR56 506 aa10.52□□□□□ -0.73
CCDC47-207ENST00000612558 Q6ZNB5 142 aa10.52□□□□□ -0.73
CCDC47-207ENST00000612558 PACS2Q86VP3 889 aa10.52□□□□□ -0.73
CCDC47-207ENST00000612558 CERS3Q8IU89 383 aa10.52□□□□□ -0.73
CCDC47-207ENST00000612558 TBC1D10CQ8IV04 446 aa10.52□□□□□ -0.73
CCDC47-207ENST00000612558 CCDC83Q8IWF9 413 aa10.52□□□□□ -0.73
CCDC47-207ENST00000612558 SDR42E1Q8WUS8 393 aa10.52□□□□□ -0.73
CCDC47-207ENST00000612558 BRF1Q92994 677 aa10.52□□□□□ -0.73
CCDC47-207ENST00000612558 LRRC2Q9BYS8 371 aa10.52□□□□□ -0.73
CCDC47-207ENST00000612558 CRNKL1Q9BZJ0 848 aaKnown RBP10.52□□□□□ -0.73
CCDC47-207ENST00000612558 CNNM2Q9H8M5 875 aa10.52□□□□□ -0.73
CCDC47-207ENST00000612558 AATFQ9NY61 560 aaKnown RBP eCLIP10.52□□□□□ -0.73
CCDC47-207ENST00000612558 SEPT9Q9UHD8 586 aaPredicted RBP10.52□□□□□ -0.73
CCDC47-207ENST00000612558 SMC3Q9UQE7 1217 aa10.52□□□□□ -0.73
CCDC47-207ENST00000612558 MAST2Q6P0Q8 1798 aa10.51□□□□□ -0.73
CCDC47-207ENST00000612558 PRC1O43663 620 aa10.51□□□□□ -0.73
CCDC47-207ENST00000612558 BAG3O95817 575 aa10.51□□□□□ -0.73
CCDC47-207ENST00000612558 PPP4CP60510 307 aa10.51□□□□□ -0.73
CCDC47-207ENST00000612558 GTF2IP78347 998 aa10.51□□□□□ -0.73
CCDC47-207ENST00000612558 LAPTM4AQ15012 233 aa10.51□□□□□ -0.73
CCDC47-207ENST00000612558 AKNAD1Q5T1N1 836 aa10.51□□□□□ -0.73
CCDC47-207ENST00000612558 MFSD6Q6ZSS7 791 aa10.51□□□□□ -0.73
CCDC47-207ENST00000612558 PODNQ7Z5L7 613 aa10.51□□□□□ -0.73
CCDC47-207ENST00000612558 SLF2Q8IX21 1173 aa10.51□□□□□ -0.73
CCDC47-207ENST00000612558 NECAB1Q8N987 351 aa10.51□□□□□ -0.73
CCDC47-207ENST00000612558 STAG1Q8WVM7 1258 aa10.51□□□□□ -0.73
CCDC47-207ENST00000612558 CHMP4CQ96CF2 233 aa10.51□□□□□ -0.73
CCDC47-207ENST00000612558 NOL10Q9BSC4 688 aaKnown RBP10.51□□□□□ -0.73
CCDC47-207ENST00000612558 RTFDC1Q9BY42 306 aaPredicted RBP10.51□□□□□ -0.73
CCDC47-207ENST00000612558 RNF41Q9H4P4 317 aaPredicted RBP10.51□□□□□ -0.73
CCDC47-207ENST00000612558 ATP8A2Q9NTI2 1148 aa10.51□□□□□ -0.73
CCDC47-207ENST00000612558 ANAPC4Q9UJX5 808 aa10.51□□□□□ -0.73
CCDC47-207ENST00000612558 SUGT1Q9Y2Z0 365 aa10.51□□□□□ -0.73
CCDC47-207ENST00000612558 CHD4Q14839 1912 aa10.5□□□□□ -0.73
CCDC47-207ENST00000612558 KIAA1551Q9HCM1 1747 aa10.5□□□□□ -0.73
CCDC47-207ENST00000612558 DPYSL4O14531 572 aa10.5□□□□□ -0.73
CCDC47-207ENST00000612558 EVCP57679 992 aa10.5□□□□□ -0.73
CCDC47-207ENST00000612558 CTDSPL2Q05D32 466 aa10.5□□□□□ -0.73
CCDC47-207ENST00000612558 PPARAQ07869 468 aa10.5□□□□□ -0.73
CCDC47-207ENST00000612558 ST3GAL1Q11201 340 aa10.5□□□□□ -0.73
CCDC47-207ENST00000612558 GRIK5Q16478 980 aa10.5□□□□□ -0.73
CCDC47-207ENST00000612558 CLEC17AQ6ZS10 378 aa10.5□□□□□ -0.73
CCDC47-207ENST00000612558 CHST3Q7LGC8 479 aa10.5□□□□□ -0.73
CCDC47-207ENST00000612558 TTLL6Q8N841 843 aa10.5□□□□□ -0.73
CCDC47-207ENST00000612558 SUPT20HQ8NEM7 779 aa10.5□□□□□ -0.73
CCDC47-207ENST00000612558 ZNF274Q96GC6 653 aaPredicted RBP10.5□□□□□ -0.73
CCDC47-207ENST00000612558 GBP4Q96PP9 640 aa10.5□□□□□ -0.73
CCDC47-207ENST00000612558 KRT23Q9C075 422 aa10.5□□□□□ -0.73
CCDC47-207ENST00000612558 MYH2Q9UKX2 1941 aa10.49□□□□□ -0.73
CCDC47-207ENST00000612558 MROH7-TTC4A0A0A0MT08 1334 aa10.49□□□□□ -0.73
CCDC47-207ENST00000612558 PFKFB2O60825 505 aa10.49□□□□□ -0.73
CCDC47-207ENST00000612558 PCP11498 1178 aaKnown RBP10.49□□□□□ -0.73
CCDC47-207ENST00000612558 PDIA4P13667 645 aaKnown RBP10.49□□□□□ -0.73
CCDC47-207ENST00000612558 POLD1P28340 1107 aa10.49□□□□□ -0.73
CCDC47-207ENST00000612558 MCM4P33991 863 aa10.49□□□□□ -0.73
CCDC47-207ENST00000612558 ANTXR2P58335 489 aa10.49□□□□□ -0.73
CCDC47-207ENST00000612558 APOBRQ0VD83 1088 aa10.49□□□□□ -0.73
CCDC47-207ENST00000612558 PKP1Q13835 747 aa10.49□□□□□ -0.73
CCDC47-207ENST00000612558 DIXDC1Q155Q3 683 aa10.49□□□□□ -0.73
CCDC47-207ENST00000612558 GTF3C6Q969F1 213 aa10.49□□□□□ -0.73
CCDC47-207ENST00000612558 TMEM87BQ96K49 555 aa10.49□□□□□ -0.73
CCDC47-207ENST00000612558 MTFR1LQ9H019 292 aa10.49□□□□□ -0.73
CCDC47-207ENST00000612558 HPS5Q9UPZ3 1129 aa10.49□□□□□ -0.73
CCDC47-207ENST00000612558 ZDHHC9Q9Y397 364 aa10.49□□□□□ -0.73
CCDC47-207ENST00000612558 NEDD4P46934 1319 aa10.49□□□□□ -0.73
CCDC47-207ENST00000612558 GPR75-ASB3A0A0A6YYF3 556 aa10.48□□□□□ -0.73
CCDC47-207ENST00000612558 MINDY4BA8MYZ0 360 aa10.48□□□□□ -0.73
CCDC47-207ENST00000612558 B4E1Z4 1266 aa10.48□□□□□ -0.73
CCDC47-207ENST00000612558 ZBTB7AO95365 584 aa10.48□□□□□ -0.73
CCDC47-207ENST00000612558 BRD1O95696 1058 aa10.48□□□□□ -0.73
CCDC47-207ENST00000612558 DPEP1P16444 411 aa10.48□□□□□ -0.73
CCDC47-207ENST00000612558 GJB2P29033 226 aa10.48□□□□□ -0.73
CCDC47-207ENST00000612558 TGFB2P61812 414 aa10.48□□□□□ -0.73
CCDC47-207ENST00000612558 STK3Q13188 491 aa10.48□□□□□ -0.73
CCDC47-207ENST00000612558 SBK1Q52WX2 424 aa10.48□□□□□ -0.73
CCDC47-207ENST00000612558 CTR9Q6PD62 1173 aa10.48□□□□□ -0.73
CCDC47-207ENST00000612558 LLPHQ9BRT6 129 aaKnown RBP10.48□□□□□ -0.73
CCDC47-207ENST00000612558 MTA3Q9BTC8 594 aa10.48□□□□□ -0.73
CCDC47-207ENST00000612558 DCP1AQ9NPI6 582 aaPredicted RBP10.48□□□□□ -0.73
CCDC47-207ENST00000612558 DLEC1Q9Y238 1755 aa10.48□□□□□ -0.73
CCDC47-207ENST00000612558 WDR33Q9C0J8 1336 aaKnown RBP10.48□□□□□ -0.73
CCDC47-207ENST00000612558 TIAM2Q8IVF5 1701 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms