RNA–Protein interactions for RNA: ENST00000604859.1

NEK4P3-201, Transcript of NIMA-related kinase 4 pseudogene 3, humanhuman

BASIC

Gene NEK4P3, Length 544 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P3-201ENST00000604859 PNMA3Q9UL41 463 aa15.85■□□□□ 0.13
NEK4P3-201ENST00000604859 NR2E3Q9Y5X4 410 aa15.85■□□□□ 0.13
NEK4P3-201ENST00000604859 RANBP2P49792 3224 aaKnown RBP15.84■□□□□ 0.13
NEK4P3-201ENST00000604859 FARP2O94887 1054 aaPredicted RBP15.84■□□□□ 0.13
NEK4P3-201ENST00000604859 INHAP05111 366 aa15.84■□□□□ 0.13
NEK4P3-201ENST00000604859 SPP2Q13103 211 aa15.84■□□□□ 0.13
NEK4P3-201ENST00000604859 TREML2Q5T2D2 321 aa15.84■□□□□ 0.13
NEK4P3-201ENST00000604859 PROCA1Q8NCQ7 364 aaPredicted RBP15.84■□□□□ 0.13
NEK4P3-201ENST00000604859 ZNF280CQ8ND82 737 aa15.84■□□□□ 0.13
NEK4P3-201ENST00000604859 TBC1D2Q9BYX2 928 aa15.84■□□□□ 0.13
NEK4P3-201ENST00000604859 ATAD5Q96QE3 1844 aa15.83■□□□□ 0.12
NEK4P3-201ENST00000604859 FAM196BA6NMK8 535 aa15.83■□□□□ 0.12
NEK4P3-201ENST00000604859 ARID4AP29374 1257 aaPredicted RBP15.83■□□□□ 0.12
NEK4P3-201ENST00000604859 PI16Q6UXB8 463 aa15.83■□□□□ 0.12
NEK4P3-201ENST00000604859 RAI14Q9P0K7 980 aa15.83■□□□□ 0.12
NEK4P3-201ENST00000604859 IPO8O15397 1037 aaKnown RBP15.82■□□□□ 0.12
NEK4P3-201ENST00000604859 GNAI2P04899 355 aa15.82■□□□□ 0.12
NEK4P3-201ENST00000604859 CAP2P40123 477 aa15.82■□□□□ 0.12
NEK4P3-201ENST00000604859 GCLCP48506 637 aaPredicted RBP15.82■□□□□ 0.12
NEK4P3-201ENST00000604859 G3BP1Q13283 466 aaKnown RBP eCLIP15.82■□□□□ 0.12
NEK4P3-201ENST00000604859 PABPC4Q13310 644 aaKnown RBP eCLIP15.82■□□□□ 0.12
NEK4P3-201ENST00000604859 FAM110CQ1W6H9 321 aa15.82■□□□□ 0.12
NEK4P3-201ENST00000604859 DEFB118Q96PH6 123 aa15.82■□□□□ 0.12
NEK4P3-201ENST00000604859 PAK6Q9NQU5 681 aaPredicted RBP15.82■□□□□ 0.12
NEK4P3-201ENST00000604859 LRP2BPQ9P2M1 347 aa15.82■□□□□ 0.12
NEK4P3-201ENST00000604859 TAOK2Q9UL54 1235 aa15.82■□□□□ 0.12
NEK4P3-201ENST00000604859 COL2A1P02458 1487 aaPredicted RBP15.82■□□□□ 0.12
NEK4P3-201ENST00000604859 USP17L5A8MUK1 530 aa15.81■□□□□ 0.12
NEK4P3-201ENST00000604859 ZBTB7BO15156 539 aaPredicted RBP15.81■□□□□ 0.12
NEK4P3-201ENST00000604859 UQCRFS1P1P0C7P4 283 aa15.81■□□□□ 0.12
NEK4P3-201ENST00000604859 MCAMP43121 646 aa15.81■□□□□ 0.12
NEK4P3-201ENST00000604859 HMGCS2P54868 508 aa15.81■□□□□ 0.12
NEK4P3-201ENST00000604859 TEX11Q8IYF3 940 aa15.81■□□□□ 0.12
NEK4P3-201ENST00000604859 PRO3102Q9H379 93 aa15.81■□□□□ 0.12
NEK4P3-201ENST00000604859 HERC5Q9UII4 1024 aaKnown RBP15.81■□□□□ 0.12
NEK4P3-201ENST00000604859 LOC285556D6RIA3 1793 aa15.8■□□□□ 0.12
NEK4P3-201ENST00000604859 PNMA6EA0A0J9YXQ4 647 aa15.8■□□□□ 0.12
NEK4P3-201ENST00000604859 EVI5O60447 810 aa15.8■□□□□ 0.12
NEK4P3-201ENST00000604859 RRP1BQ14684 758 aaKnown RBP15.8■□□□□ 0.12
NEK4P3-201ENST00000604859 SH3D19Q5HYK7 790 aa15.8■□□□□ 0.12
NEK4P3-201ENST00000604859 SH3RF3Q8TEJ3 882 aaPredicted RBP15.8■□□□□ 0.12
NEK4P3-201ENST00000604859 NOL10Q9BSC4 688 aaKnown RBP15.8■□□□□ 0.12
NEK4P3-201ENST00000604859 CRISPLD2Q9H0B8 497 aa15.8■□□□□ 0.12
NEK4P3-201ENST00000604859 DHX36Q9H2U1 1008 aaKnown RBP15.8■□□□□ 0.12
NEK4P3-201ENST00000604859 AS3MTQ9HBK9 375 aa15.8■□□□□ 0.12
NEK4P3-201ENST00000604859 PI4KBQ9UBF8 816 aa15.8■□□□□ 0.12
NEK4P3-201ENST00000604859 BAG3O95817 575 aa15.79■□□□□ 0.12
NEK4P3-201ENST00000604859 TRIM27P14373 513 aa15.79■□□□□ 0.12
NEK4P3-201ENST00000604859 ATF7IPQ6VMQ6 1270 aa15.79■□□□□ 0.12
NEK4P3-201ENST00000604859 ASCC2Q9H1I8 757 aaPredicted RBP15.79■□□□□ 0.12
NEK4P3-201ENST00000604859 GJD2Q9UKL4 321 aa15.79■□□□□ 0.12
NEK4P3-201ENST00000604859 FRAT1Q92837 279 aaPredicted RBP15.78■□□□□ 0.12
NEK4P3-201ENST00000604859 PAWRQ96IZ0 340 aaKnown RBP15.78■□□□□ 0.12
NEK4P3-201ENST00000604859 WDR18Q9BV38 432 aa15.78■□□□□ 0.12
NEK4P3-201ENST00000604859 SNRKQ9NRH2 765 aa15.78■□□□□ 0.12
NEK4P3-201ENST00000604859 BCAR3O75815 825 aa15.77■□□□□ 0.12
NEK4P3-201ENST00000604859 PLCG2P16885 1265 aa15.77■□□□□ 0.12
NEK4P3-201ENST00000604859 BACE1P56817 501 aa15.77■□□□□ 0.12
NEK4P3-201ENST00000604859 PPP4CP60510 307 aa15.77■□□□□ 0.12
NEK4P3-201ENST00000604859 CCDC158Q5M9N0 1113 aa15.77■□□□□ 0.12
NEK4P3-201ENST00000604859 NAA16Q6N069 864 aaPredicted RBP15.77■□□□□ 0.12
NEK4P3-201ENST00000604859 NECAB2Q7Z6G3 386 aa15.77■□□□□ 0.12
NEK4P3-201ENST00000604859 FOXP4Q8IVH2 680 aaPredicted RBP15.77■□□□□ 0.12
NEK4P3-201ENST00000604859 CLUAP1Q96AJ1 413 aa15.77■□□□□ 0.12
NEK4P3-201ENST00000604859 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.77■□□□□ 0.12
NEK4P3-201ENST00000604859 GPR108Q9NPR9 543 aa15.77■□□□□ 0.12
NEK4P3-201ENST00000604859 AATFQ9NY61 560 aaKnown RBP eCLIP15.77■□□□□ 0.12
NEK4P3-201ENST00000604859 TNNQ9UQP3 1299 aa15.77■□□□□ 0.12
NEK4P3-201ENST00000604859 CDK5RAP2Q96SN8 1893 aa15.76■□□□□ 0.11
NEK4P3-201ENST00000604859 RPTORQ8N122 1335 aa15.76■□□□□ 0.11
NEK4P3-201ENST00000604859 A0A1W2PPC1 479 aa15.76■□□□□ 0.11
NEK4P3-201ENST00000604859 HMGCRP04035 888 aa15.76■□□□□ 0.11
NEK4P3-201ENST00000604859 ASNSP08243 561 aa15.76■□□□□ 0.11
NEK4P3-201ENST00000604859 HOXA7P31268 230 aaPredicted RBP15.76■□□□□ 0.11
NEK4P3-201ENST00000604859 TTC39AQ5SRH9 613 aa15.76■□□□□ 0.11
NEK4P3-201ENST00000604859 METTL16Q86W50 562 aaKnown RBP15.76■□□□□ 0.11
NEK4P3-201ENST00000604859 ANKLE1Q8NAG6 615 aa15.76■□□□□ 0.11
NEK4P3-201ENST00000604859 TGFBRAP1Q8WUH2 860 aa15.76■□□□□ 0.11
NEK4P3-201ENST00000604859 HMX1Q9NP08 348 aaPredicted RBP15.76■□□□□ 0.11
NEK4P3-201ENST00000604859 TMOD4Q9NZQ9 345 aa15.76■□□□□ 0.11
NEK4P3-201ENST00000604859 MORF4L1Q9UBU8 362 aa15.76■□□□□ 0.11
NEK4P3-201ENST00000604859 ALPK3Q96L96 1907 aa15.76■□□□□ 0.11
NEK4P3-201ENST00000604859 MYO5AQ9Y4I1 1855 aaKnown RBP15.76■□□□□ 0.11
NEK4P3-201ENST00000604859 PLXNB2O15031 1838 aa15.75■□□□□ 0.11
NEK4P3-201ENST00000604859 SIPA1L1O43166 1804 aa15.75■□□□□ 0.11
NEK4P3-201ENST00000604859 C19orf81C9J6K1 198 aa15.75■□□□□ 0.11
NEK4P3-201ENST00000604859 CCER2I3L3R5 266 aa15.75■□□□□ 0.11
NEK4P3-201ENST00000604859 CYP2E1P05181 493 aaPredicted RBP15.75■□□□□ 0.11
NEK4P3-201ENST00000604859 IRX3P78415 501 aaPredicted RBP15.75■□□□□ 0.11
NEK4P3-201ENST00000604859 MTMR2Q13614 643 aa15.75■□□□□ 0.11
NEK4P3-201ENST00000604859 TNNI3KQ59H18 835 aa15.75■□□□□ 0.11
NEK4P3-201ENST00000604859 MAPKAPK5Q8IW41 473 aa15.75■□□□□ 0.11
NEK4P3-201ENST00000604859 P2RX7Q99572 595 aaKnown RBP15.75■□□□□ 0.11
NEK4P3-201ENST00000604859 STAP2Q9UGK3 403 aa15.75■□□□□ 0.11
NEK4P3-201ENST00000604859 FPGT-TNNI3KV9GXZ4 949 aa15.75■□□□□ 0.11
NEK4P3-201ENST00000604859 FOCADQ5VW36 1801 aa15.75■□□□□ 0.11
NEK4P3-201ENST00000604859 IGSF3O75054 1194 aa15.74■□□□□ 0.11
NEK4P3-201ENST00000604859 JAG1P78504 1218 aa15.74■□□□□ 0.11
NEK4P3-201ENST00000604859 ATP8B2P98198 1209 aa15.74■□□□□ 0.11
NEK4P3-201ENST00000604859 TRIM32Q13049 653 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms