RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 IQCA1Q86XH1 822 aa13.29□□□□□ -0.28
ARHGEF1-220ENST00000600274 STAMQ92783 540 aa13.29□□□□□ -0.28
ARHGEF1-220ENST00000600274 SAP30BPQ9UHR5 308 aaKnown RBP13.29□□□□□ -0.28
ARHGEF1-220ENST00000600274 IQCB1Q15051 598 aa13.28□□□□□ -0.28
ARHGEF1-220ENST00000600274 KLHL10Q6JEL2 608 aa13.28□□□□□ -0.28
ARHGEF1-220ENST00000600274 CATIPQ7Z7H3 387 aa13.28□□□□□ -0.28
ARHGEF1-220ENST00000600274 ITGB4P16144 1822 aa13.28□□□□□ -0.28
ARHGEF1-220ENST00000600274 ROBO1Q9Y6N7 1651 aa13.28□□□□□ -0.28
ARHGEF1-220ENST00000600274 SHANK3Q9BYB0 1731 aa13.28□□□□□ -0.28
ARHGEF1-220ENST00000600274 SERPINC1P01008 464 aa13.28□□□□□ -0.28
ARHGEF1-220ENST00000600274 SLC39A14Q15043 492 aa13.28□□□□□ -0.28
ARHGEF1-220ENST00000600274 ARHGEF1Q92888 912 aaKnown RBP13.28□□□□□ -0.28
ARHGEF1-220ENST00000600274 AK7Q96M32 723 aa13.28□□□□□ -0.28
ARHGEF1-220ENST00000600274 PCDHB6Q9Y5E3 794 aa13.28□□□□□ -0.28
ARHGEF1-220ENST00000600274 DYNC1I1O14576 645 aa13.27□□□□□ -0.28
ARHGEF1-220ENST00000600274 AFMP43652 599 aa13.27□□□□□ -0.28
ARHGEF1-220ENST00000600274 NTRK3Q16288 839 aa13.27□□□□□ -0.28
ARHGEF1-220ENST00000600274 SHC4Q6S5L8 630 aa13.27□□□□□ -0.28
ARHGEF1-220ENST00000600274 FAM196AQ6ZSG2 479 aa13.27□□□□□ -0.28
ARHGEF1-220ENST00000600274 NOSTRINQ8IVI9 506 aa13.27□□□□□ -0.28
ARHGEF1-220ENST00000600274 KIAA1524Q8TCG1 905 aa13.27□□□□□ -0.28
ARHGEF1-220ENST00000600274 BSDC1Q9NW68 430 aaPredicted RBP13.27□□□□□ -0.28
ARHGEF1-220ENST00000600274 SLIT2O94813 1529 aa13.27□□□□□ -0.28
ARHGEF1-220ENST00000600274 POLR2DO15514 142 aaKnown RBP13.27□□□□□ -0.28
ARHGEF1-220ENST00000600274 GOLGA8FQ08AF8 430 aa13.27□□□□□ -0.28
ARHGEF1-220ENST00000600274 GOLGA8DPQ0D2H9 430 aa13.27□□□□□ -0.28
ARHGEF1-220ENST00000600274 LONRF3Q496Y0 759 aa13.27□□□□□ -0.28
ARHGEF1-220ENST00000600274 ATL3Q6DD88 541 aa13.27□□□□□ -0.28
ARHGEF1-220ENST00000600274 DHX40Q8IX18 779 aaKnown RBP13.27□□□□□ -0.28
ARHGEF1-220ENST00000600274 MYO5AQ9Y4I1 1855 aaKnown RBP13.27□□□□□ -0.29
ARHGEF1-220ENST00000600274 USP17L8P0C7I0 530 aa13.27□□□□□ -0.29
ARHGEF1-220ENST00000600274 ATP1A3P13637 1013 aa13.27□□□□□ -0.29
ARHGEF1-220ENST00000600274 TPM4P67936 248 aa13.27□□□□□ -0.29
ARHGEF1-220ENST00000600274 DYNLL2Q96FJ2 89 aa13.27□□□□□ -0.29
ARHGEF1-220ENST00000600274 BCL2L12Q9HB09 334 aa13.27□□□□□ -0.29
ARHGEF1-220ENST00000600274 KCNH3Q9ULD8 1083 aa13.27□□□□□ -0.29
ARHGEF1-220ENST00000600274 F8W031 263 aaPredicted RBP13.26□□□□□ -0.29
ARHGEF1-220ENST00000600274 SKILP12757 684 aa13.26□□□□□ -0.29
ARHGEF1-220ENST00000600274 CASP1P29466 404 aa13.26□□□□□ -0.29
ARHGEF1-220ENST00000600274 UBE4AQ14139 1066 aa13.26□□□□□ -0.29
ARHGEF1-220ENST00000600274 ZNF174Q15697 407 aa13.26□□□□□ -0.29
ARHGEF1-220ENST00000600274 NOM1Q5C9Z4 860 aaKnown RBP13.26□□□□□ -0.29
ARHGEF1-220ENST00000600274 AXDND1Q5T1B0 1012 aaPredicted RBP13.26□□□□□ -0.29
ARHGEF1-220ENST00000600274 USP49Q70CQ1 688 aa13.26□□□□□ -0.29
ARHGEF1-220ENST00000600274 ENAHQ8N8S7 591 aaPredicted RBP13.26□□□□□ -0.29
ARHGEF1-220ENST00000600274 STAG1Q8WVM7 1258 aa13.26□□□□□ -0.29
ARHGEF1-220ENST00000600274 XPO4Q9C0E2 1151 aaKnown RBP13.26□□□□□ -0.29
ARHGEF1-220ENST00000600274 STX8Q9UNK0 236 aa13.26□□□□□ -0.29
ARHGEF1-220ENST00000600274 CCDC196A0A1B0GTZ2 297 aa13.26□□□□□ -0.29
ARHGEF1-220ENST00000600274 COBLO75128 1261 aa13.26□□□□□ -0.29
ARHGEF1-220ENST00000600274 FMNL1O95466 1100 aaPredicted RBP13.26□□□□□ -0.29
ARHGEF1-220ENST00000600274 LIFRP42702 1097 aa13.26□□□□□ -0.29
ARHGEF1-220ENST00000600274 NFIXQ14938 502 aa13.26□□□□□ -0.29
ARHGEF1-220ENST00000600274 CFAP100Q494V2 611 aa13.26□□□□□ -0.29
ARHGEF1-220ENST00000600274 RBM43Q6ZSC3 357 aaKnown RBP13.26□□□□□ -0.29
ARHGEF1-220ENST00000600274 TRMT44Q8IYL2 757 aaKnown RBP13.26□□□□□ -0.29
ARHGEF1-220ENST00000600274 WASF1Q92558 559 aa13.26□□□□□ -0.29
ARHGEF1-220ENST00000600274 LAMA4Q16363 1823 aa13.26□□□□□ -0.29
ARHGEF1-220ENST00000600274 TNNT1P13805 278 aa13.26□□□□□ -0.29
ARHGEF1-220ENST00000600274 CDK11BP21127 795 aaKnown RBP13.26□□□□□ -0.29
ARHGEF1-220ENST00000600274 ZNF771Q7L3S4 317 aaPredicted RBP13.26□□□□□ -0.29
ARHGEF1-220ENST00000600274 SGMS1Q86VZ5 419 aa13.26□□□□□ -0.29
ARHGEF1-220ENST00000600274 PLA2G4DQ86XP0 818 aa13.26□□□□□ -0.29
ARHGEF1-220ENST00000600274 DHX58Q96C10 678 aa13.26□□□□□ -0.29
ARHGEF1-220ENST00000600274 ZSCAN10Q96SZ4 725 aaPredicted RBP13.26□□□□□ -0.29
ARHGEF1-220ENST00000600274 LRP6O75581 1613 aa13.25□□□□□ -0.29
ARHGEF1-220ENST00000600274 ZNF804BA4D1E1 1349 aa13.25□□□□□ -0.29
ARHGEF1-220ENST00000600274 RAD21O60216 631 aa13.25□□□□□ -0.29
ARHGEF1-220ENST00000600274 IFNAR1P17181 557 aa13.25□□□□□ -0.29
ARHGEF1-220ENST00000600274 CMA1P23946 247 aa13.25□□□□□ -0.29
ARHGEF1-220ENST00000600274 OLFM4Q6UX06 510 aa13.25□□□□□ -0.29
ARHGEF1-220ENST00000600274 CRACR2BQ8N4Y2 399 aaPredicted RBP13.25□□□□□ -0.29
ARHGEF1-220ENST00000600274 RASSF8Q8NHQ8 419 aa13.25□□□□□ -0.29
ARHGEF1-220ENST00000600274 CRNKL1Q9BZJ0 848 aaKnown RBP13.25□□□□□ -0.29
ARHGEF1-220ENST00000600274 MKNK2Q9HBH9 465 aa13.25□□□□□ -0.29
ARHGEF1-220ENST00000600274 ABCA3Q99758 1704 aa13.25□□□□□ -0.29
ARHGEF1-220ENST00000600274 A0A1W2PQ27 194 aa13.25□□□□□ -0.29
ARHGEF1-220ENST00000600274 A0A1W2PQ64 194 aa13.25□□□□□ -0.29
ARHGEF1-220ENST00000600274 A0A1W2PQD8 194 aa13.25□□□□□ -0.29
ARHGEF1-220ENST00000600274 ALX1Q15699 326 aa13.25□□□□□ -0.29
ARHGEF1-220ENST00000600274 KRI1Q8N9T8 703 aaKnown RBP13.25□□□□□ -0.29
ARHGEF1-220ENST00000600274 SLC44A5Q8NCS7 719 aa13.25□□□□□ -0.29
ARHGEF1-220ENST00000600274 CTCFLQ8NI51 663 aaPredicted RBP13.25□□□□□ -0.29
ARHGEF1-220ENST00000600274 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.25□□□□□ -0.297e-6■■□□□ 11.8
ARHGEF1-220ENST00000600274 V9GYY5 206 aaPredicted RBP13.25□□□□□ -0.29
ARHGEF1-220ENST00000600274 NUP98P52948 1817 aa13.25□□□□□ -0.29
ARHGEF1-220ENST00000600274 DEXIO95424 95 aa13.25□□□□□ -0.29
ARHGEF1-220ENST00000600274 MMP1P03956 469 aa13.25□□□□□ -0.29
ARHGEF1-220ENST00000600274 TPM3P06753 285 aa13.25□□□□□ -0.29
ARHGEF1-220ENST00000600274 TRAPPC3LQ5T215 181 aa13.25□□□□□ -0.29
ARHGEF1-220ENST00000600274 CLEC4GQ6UXB4 293 aa13.25□□□□□ -0.29
ARHGEF1-220ENST00000600274 MAPKAPK5Q8IW41 473 aa13.25□□□□□ -0.29
ARHGEF1-220ENST00000600274 FAM177A1Q8N128 213 aaPredicted RBP13.25□□□□□ -0.29
ARHGEF1-220ENST00000600274 PDCL2Q8N4E4 241 aa13.25□□□□□ -0.29
ARHGEF1-220ENST00000600274 XBP1P17861 261 aa13.24□□□□□ -0.29
ARHGEF1-220ENST00000600274 CTR9Q6PD62 1173 aa13.24□□□□□ -0.29
ARHGEF1-220ENST00000600274 TICAM2Q86XR7 235 aa13.24□□□□□ -0.29
ARHGEF1-220ENST00000600274 CNBD1Q8NA66 436 aa13.24□□□□□ -0.29
ARHGEF1-220ENST00000600274 ZNF384Q8TF68 577 aa13.24□□□□□ -0.29
ARHGEF1-220ENST00000600274 NYXQ9GZU5 481 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms