RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 RNF26Q9BY78 433 aaPredicted RBP8.25□□□□□ -1.09
SPIDR-228ENST00000588781 ANKRD2Q9GZV1 360 aa8.25□□□□□ -1.09
SPIDR-228ENST00000588781 OSBPL5Q9H0X9 879 aaPredicted RBP8.25□□□□□ -1.09
SPIDR-228ENST00000588781 TOMM22Q9NS69 142 aa8.25□□□□□ -1.09
SPIDR-228ENST00000588781 PYCARDQ9ULZ3 195 aa8.25□□□□□ -1.09
SPIDR-228ENST00000588781 A0A0G2JS52 829 aa8.24□□□□□ -1.09
SPIDR-228ENST00000588781 SMC2O95347 1197 aa8.24□□□□□ -1.09
SPIDR-228ENST00000588781 TNNT1P13805 278 aa8.24□□□□□ -1.09
SPIDR-228ENST00000588781 CYP7A1P22680 504 aa8.24□□□□□ -1.09
SPIDR-228ENST00000588781 GTF2E1P29083 439 aaPredicted RBP8.24□□□□□ -1.09
SPIDR-228ENST00000588781 MYL5Q02045 173 aa8.24□□□□□ -1.09
SPIDR-228ENST00000588781 CHRNDQ07001 517 aa8.24□□□□□ -1.09
SPIDR-228ENST00000588781 PPARAQ07869 468 aa8.24□□□□□ -1.09
SPIDR-228ENST00000588781 AXDND1Q5T1B0 1012 aaPredicted RBP8.24□□□□□ -1.09
SPIDR-228ENST00000588781 SPTY2D1Q68D10 685 aaPredicted RBP8.24□□□□□ -1.09
SPIDR-228ENST00000588781 CATIPQ7Z7H3 387 aa8.24□□□□□ -1.09
SPIDR-228ENST00000588781 IQCA1Q86XH1 822 aa8.24□□□□□ -1.09
SPIDR-228ENST00000588781 CERS3Q8IU89 383 aa8.24□□□□□ -1.09
SPIDR-228ENST00000588781 LRRC8AQ8IWT6 810 aa8.24□□□□□ -1.09
SPIDR-228ENST00000588781 DHX40Q8IX18 779 aaKnown RBP8.24□□□□□ -1.09
SPIDR-228ENST00000588781 SYNE4Q8N205 404 aa8.24□□□□□ -1.09
SPIDR-228ENST00000588781 PDCL2Q8N4E4 241 aa8.24□□□□□ -1.09
SPIDR-228ENST00000588781 CNNM3Q8NE01 707 aa8.24□□□□□ -1.09
SPIDR-228ENST00000588781 BRIP1Q9BX63 1249 aa8.24□□□□□ -1.09
SPIDR-228ENST00000588781 FTOQ9C0B1 505 aaKnown RBP eCLIP8.24□□□□□ -1.09
SPIDR-228ENST00000588781 NBPF3Q9H094 633 aa8.24□□□□□ -1.09
SPIDR-228ENST00000588781 ARMT1Q9H993 441 aa8.24□□□□□ -1.09
SPIDR-228ENST00000588781 GPHNQ9NQX3 736 aaPredicted RBP8.24□□□□□ -1.09
SPIDR-228ENST00000588781 BSDC1Q9NW68 430 aaPredicted RBP8.24□□□□□ -1.09
SPIDR-228ENST00000588781 RAI14Q9P0K7 980 aa8.24□□□□□ -1.09
SPIDR-228ENST00000588781 TUBE1Q9UJT0 475 aa8.24□□□□□ -1.09
SPIDR-228ENST00000588781 HPSEQ9Y251 543 aa8.24□□□□□ -1.09
SPIDR-228ENST00000588781 ZNF804BA4D1E1 1349 aa8.24□□□□□ -1.09
SPIDR-228ENST00000588781 NEDD4P46934 1319 aa8.24□□□□□ -1.09
SPIDR-228ENST00000588781 CNTNAP4Q9C0A0 1308 aa8.24□□□□□ -1.09
SPIDR-228ENST00000588781 KCNQ2O43526 872 aa8.23□□□□□ -1.09
SPIDR-228ENST00000588781 DDAH1O94760 285 aa8.23□□□□□ -1.09
SPIDR-228ENST00000588781 MMP1P03956 469 aa8.23□□□□□ -1.09
SPIDR-228ENST00000588781 SKILP12757 684 aa8.23□□□□□ -1.09
SPIDR-228ENST00000588781 SFPQP23246 707 aaKnown RBP eCLIP8.23□□□□□ -1.09
SPIDR-228ENST00000588781 HMGB2P26583 209 aaKnown RBP8.23□□□□□ -1.09
SPIDR-228ENST00000588781 PTPN14Q15678 1187 aa8.23□□□□□ -1.09
SPIDR-228ENST00000588781 NTRK3Q16288 839 aa8.23□□□□□ -1.09
SPIDR-228ENST00000588781 FAM98CQ17RN3 349 aaKnown RBP8.23□□□□□ -1.09
SPIDR-228ENST00000588781 RRP12Q5JTH9 1297 aaKnown RBP8.23□□□□□ -1.09
SPIDR-228ENST00000588781 SLC10A5Q5PT55 438 aa8.23□□□□□ -1.09
SPIDR-228ENST00000588781 FAM182BQ5T319 152 aa8.23□□□□□ -1.09
SPIDR-228ENST00000588781 OTUD7BQ6GQQ9 843 aa8.23□□□□□ -1.09
SPIDR-228ENST00000588781 ZNF654Q8IZM8 581 aa8.23□□□□□ -1.09
SPIDR-228ENST00000588781 FAM177A1Q8N128 213 aaPredicted RBP8.23□□□□□ -1.09
SPIDR-228ENST00000588781 MLKLQ8NB16 471 aa8.23□□□□□ -1.09
SPIDR-228ENST00000588781 HELBQ8NG08 1087 aaPredicted RBP8.23□□□□□ -1.09
SPIDR-228ENST00000588781 CRNKL1Q9BZJ0 848 aaKnown RBP8.23□□□□□ -1.09
SPIDR-228ENST00000588781 SPON1Q9HCB6 807 aa8.23□□□□□ -1.09
SPIDR-228ENST00000588781 EPB41L4AQ9HCS5 686 aaPredicted RBP8.23□□□□□ -1.09
SPIDR-228ENST00000588781 ZSWIM5Q9P217 1185 aa8.23□□□□□ -1.09
SPIDR-228ENST00000588781 KCNH3Q9ULD8 1083 aa8.23□□□□□ -1.09
SPIDR-228ENST00000588781 SPATA31A5Q5VU36 1347 aa8.23□□□□□ -1.09
SPIDR-228ENST00000588781 SPATA31A7Q8IWB4 1347 aa8.23□□□□□ -1.09
SPIDR-228ENST00000588781 GOLGA6L9A6NEM1 432 aa8.22□□□□□ -1.09
SPIDR-228ENST00000588781 KIF28PB7ZC32 967 aa8.22□□□□□ -1.09
SPIDR-228ENST00000588781 CDC27P30260 824 aa8.22□□□□□ -1.09
SPIDR-228ENST00000588781 KRT2P35908 639 aa8.22□□□□□ -1.09
SPIDR-228ENST00000588781 BCAMP50895 628 aa8.22□□□□□ -1.09
SPIDR-228ENST00000588781 CTDSPL2Q05D32 466 aa8.22□□□□□ -1.09
SPIDR-228ENST00000588781 PTPAQ15257 358 aa8.22□□□□□ -1.09
SPIDR-228ENST00000588781 RC3H1Q5TC82 1133 aaKnown RBP8.22□□□□□ -1.09
SPIDR-228ENST00000588781 CEP135Q66GS9 1140 aa8.22□□□□□ -1.09
SPIDR-228ENST00000588781 KRBA2Q6ZNG9 492 aa8.22□□□□□ -1.09
SPIDR-228ENST00000588781 FCHSD1Q86WN1 690 aa8.22□□□□□ -1.09
SPIDR-228ENST00000588781 AMOTL1Q8IY63 956 aa8.22□□□□□ -1.09
SPIDR-228ENST00000588781 DIS3L2Q8IYB7 885 aaKnown RBP8.22□□□□□ -1.09
SPIDR-228ENST00000588781 LCORLQ8N3X6 602 aa8.22□□□□□ -1.09
SPIDR-228ENST00000588781 CRACR2BQ8N4Y2 399 aaPredicted RBP8.22□□□□□ -1.09
SPIDR-228ENST00000588781 MPNDQ8N594 471 aa8.22□□□□□ -1.09
SPIDR-228ENST00000588781 FANCBQ8NB91 859 aa8.22□□□□□ -1.09
SPIDR-228ENST00000588781 KIF18AQ8NI77 898 aa8.22□□□□□ -1.09
SPIDR-228ENST00000588781 CACTINQ8WUQ7 758 aaKnown RBP8.22□□□□□ -1.09
SPIDR-228ENST00000588781 UBE2Q2Q8WVN8 375 aa8.22□□□□□ -1.09
SPIDR-228ENST00000588781 PHKBQ93100 1093 aa8.22□□□□□ -1.09
SPIDR-228ENST00000588781 FERMT2Q96AC1 680 aa8.22□□□□□ -1.09
SPIDR-228ENST00000588781 MAP3K14Q99558 947 aa8.22□□□□□ -1.09
SPIDR-228ENST00000588781 ATP8A2Q9NTI2 1148 aa8.22□□□□□ -1.09
SPIDR-228ENST00000588781 PPP1R1BQ9UD71 204 aaPredicted RBP8.22□□□□□ -1.09
SPIDR-228ENST00000588781 BCORQ6W2J9 1755 aa8.22□□□□□ -1.09
SPIDR-228ENST00000588781 TRIM75PA6NK02 468 aa8.21□□□□□ -1.1
SPIDR-228ENST00000588781 FAM177BA6PVY3 158 aa8.21□□□□□ -1.1
SPIDR-228ENST00000588781 CTIFO43310 598 aaKnown RBP8.21□□□□□ -1.1
SPIDR-228ENST00000588781 PRPF3O43395 683 aaKnown RBP8.21□□□□□ -1.1
SPIDR-228ENST00000588781 ORC4O43929 436 aa8.21□□□□□ -1.1
SPIDR-228ENST00000588781 SERPINC1P01008 464 aa8.21□□□□□ -1.1
SPIDR-228ENST00000588781 PTPREP23469 700 aa8.21□□□□□ -1.1
SPIDR-228ENST00000588781 MARCKSP29966 332 aaPredicted RBP8.21□□□□□ -1.1
SPIDR-228ENST00000588781 KIF5BP33176 963 aa8.21□□□□□ -1.1
SPIDR-228ENST00000588781 TRAPPC10P48553 1259 aa8.21□□□□□ -1.1
SPIDR-228ENST00000588781 GNAQP50148 359 aa8.21□□□□□ -1.1
SPIDR-228ENST00000588781 GSTO1P78417 241 aa8.21□□□□□ -1.1
SPIDR-228ENST00000588781 RBM10P98175 930 aaKnown RBP8.21□□□□□ -1.1
SPIDR-228ENST00000588781 FANCCQ00597 558 aa8.21□□□□□ -1.1
SPIDR-228ENST00000588781 PDE4BQ07343 736 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms