RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 STAG2Q8N3U4 1231 aa11.92□□□□□ -0.5
RFFL-212ENST00000584655 PFKFB2O60825 505 aa11.91□□□□□ -0.5
RFFL-212ENST00000584655 GDF11O95390 407 aa11.91□□□□□ -0.5
RFFL-212ENST00000584655 STX17P56962 302 aa11.91□□□□□ -0.5
RFFL-212ENST00000584655 UBE3CQ15386 1083 aa11.91□□□□□ -0.5
RFFL-212ENST00000584655 CCDC96Q2M329 555 aa11.91□□□□□ -0.5
RFFL-212ENST00000584655 LRSAM1Q6UWE0 723 aa11.91□□□□□ -0.5
RFFL-212ENST00000584655 MIGA2Q7L4E1 593 aa11.91□□□□□ -0.5
RFFL-212ENST00000584655 GJA10Q969M2 543 aa11.91□□□□□ -0.5
RFFL-212ENST00000584655 CCDC183Q5T5S1 534 aa11.91□□□□□ -0.5
RFFL-212ENST00000584655 CATIPQ7Z7H3 387 aa11.91□□□□□ -0.5
RFFL-212ENST00000584655 TSC1Q92574 1164 aa11.91□□□□□ -0.5
RFFL-212ENST00000584655 CD209Q9NNX6 404 aa11.91□□□□□ -0.5
RFFL-212ENST00000584655 HPS5Q9UPZ3 1129 aa11.91□□□□□ -0.5
RFFL-212ENST00000584655 TCP10L2B9ZVM9 353 aa11.91□□□□□ -0.5
RFFL-212ENST00000584655 MARCH6O60337 910 aa11.91□□□□□ -0.5
RFFL-212ENST00000584655 GRAPQ13588 217 aa11.91□□□□□ -0.5
RFFL-212ENST00000584655 CLEC4GQ6UXB4 293 aa11.91□□□□□ -0.5
RFFL-212ENST00000584655 ZNF804AQ7Z570 1209 aa11.91□□□□□ -0.5
RFFL-212ENST00000584655 AMOTL1Q8IY63 956 aa11.91□□□□□ -0.5
RFFL-212ENST00000584655 CTCFLQ8NI51 663 aaPredicted RBP11.91□□□□□ -0.5
RFFL-212ENST00000584655 GRAPLQ8TC17 118 aaPredicted RBP11.91□□□□□ -0.5
RFFL-212ENST00000584655 PLA2G12BQ9BX93 195 aa11.91□□□□□ -0.5
RFFL-212ENST00000584655 ZNF277Q9NRM2 450 aaPredicted RBP11.91□□□□□ -0.5
RFFL-212ENST00000584655 GOLGA6L19H0YKK7 550 aa11.9□□□□□ -0.5
RFFL-212ENST00000584655 FOXN1O15353 648 aa11.9□□□□□ -0.5
RFFL-212ENST00000584655 EXOSC10Q01780 885 aaKnown RBP11.9□□□□□ -0.5
RFFL-212ENST00000584655 UBE4AQ14139 1066 aa11.9□□□□□ -0.5
RFFL-212ENST00000584655 CTR9Q6PD62 1173 aa11.9□□□□□ -0.5
RFFL-212ENST00000584655 USP49Q70CQ1 688 aa11.9□□□□□ -0.5
RFFL-212ENST00000584655 NBPF11Q86T75 865 aa11.9□□□□□ -0.5
RFFL-212ENST00000584655 NSUN4Q96CB9 384 aaKnown RBP11.9□□□□□ -0.5
RFFL-212ENST00000584655 GOLPH3LQ9H4A5 285 aa11.9□□□□□ -0.5
RFFL-212ENST00000584655 SMC2O95347 1197 aa11.9□□□□□ -0.5
RFFL-212ENST00000584655 PIK3AP1Q6ZUJ8 805 aa11.9□□□□□ -0.5
RFFL-212ENST00000584655 KAT14Q9H8E8 782 aa11.9□□□□□ -0.5
RFFL-212ENST00000584655 NDUFA8P51970 172 aa11.9□□□□□ -0.5
RFFL-212ENST00000584655 GOLGA8FQ08AF8 430 aa11.9□□□□□ -0.5
RFFL-212ENST00000584655 GOLGA8DPQ0D2H9 430 aa11.9□□□□□ -0.5
RFFL-212ENST00000584655 FAM177A1Q8N128 213 aaPredicted RBP11.9□□□□□ -0.5
RFFL-212ENST00000584655 RBM17Q96I25 401 aaKnown RBP11.9□□□□□ -0.5
RFFL-212ENST00000584655 DCP1AQ9NPI6 582 aaPredicted RBP11.9□□□□□ -0.5
RFFL-212ENST00000584655 R3HCC1Q9Y3T6 440 aaKnown RBP11.9□□□□□ -0.5
RFFL-212ENST00000584655 GJA3Q9Y6H8 435 aa11.9□□□□□ -0.5
RFFL-212ENST00000584655 PPEF1O14829 653 aaPredicted RBP11.89□□□□□ -0.51
RFFL-212ENST00000584655 ENAHQ8N8S7 591 aaPredicted RBP11.89□□□□□ -0.51
RFFL-212ENST00000584655 TCRBV5S4A2TA0A5A2 114 aa11.89□□□□□ -0.51
RFFL-212ENST00000584655 ESPNB1AK53 854 aa11.89□□□□□ -0.51
RFFL-212ENST00000584655 ARID4AP29374 1257 aaPredicted RBP11.89□□□□□ -0.51
RFFL-212ENST00000584655 LMOD1P29536 600 aaPredicted RBP11.89□□□□□ -0.51
RFFL-212ENST00000584655 NFIAQ12857 509 aa11.89□□□□□ -0.51
RFFL-212ENST00000584655 LY9Q9HBG7 655 aa11.89□□□□□ -0.51
RFFL-212ENST00000584655 USP40Q9NVE5 1235 aa11.89□□□□□ -0.51
RFFL-212ENST00000584655 PCDHA7Q9UN72 937 aa11.89□□□□□ -0.51
RFFL-212ENST00000584655 LRP6O75581 1613 aa11.89□□□□□ -0.51
RFFL-212ENST00000584655 TCHHQ07283 1943 aa11.89□□□□□ -0.51
RFFL-212ENST00000584655 SH2B2O14492 632 aaPredicted RBP11.89□□□□□ -0.51
RFFL-212ENST00000584655 ADAMTS3O15072 1205 aa11.89□□□□□ -0.51
RFFL-212ENST00000584655 SSBP05455 408 aaKnown RBP eCLIP11.89□□□□□ -0.51
RFFL-212ENST00000584655 ZNF165P49910 485 aa11.89□□□□□ -0.51
RFFL-212ENST00000584655 NRBP1Q9UHY1 535 aa11.89□□□□□ -0.51
RFFL-212ENST00000584655 LMO7Q8WWI1 1683 aa11.89□□□□□ -0.51
RFFL-212ENST00000584655 TYRO3Q06418 890 aa11.89□□□□□ -0.51
RFFL-212ENST00000584655 TRMT44Q8IYL2 757 aaKnown RBP11.89□□□□□ -0.51
RFFL-212ENST00000584655 FANCBQ8NB91 859 aa11.89□□□□□ -0.51
RFFL-212ENST00000584655 VWA3AA6NCI4 1184 aa11.88□□□□□ -0.51
RFFL-212ENST00000584655 SPTLC2O15270 562 aa11.88□□□□□ -0.51
RFFL-212ENST00000584655 RAD51AP2Q09MP3 1159 aa11.88□□□□□ -0.51
RFFL-212ENST00000584655 JAKMIP3Q5VZ66 844 aa11.88□□□□□ -0.51
RFFL-212ENST00000584655 ZFPM1Q8IX07 1006 aa11.88□□□□□ -0.51
RFFL-212ENST00000584655 SMYD4Q8IYR2 804 aaPredicted RBP11.88□□□□□ -0.51
RFFL-212ENST00000584655 DHX58Q96C10 678 aa11.88□□□□□ -0.51
RFFL-212ENST00000584655 NUP88Q99567 741 aaPredicted RBP11.88□□□□□ -0.51
RFFL-212ENST00000584655 SCAND2PQ9GZW5 306 aaPredicted RBP11.88□□□□□ -0.51
RFFL-212ENST00000584655 CFAP45Q9UL16 551 aa11.88□□□□□ -0.51
RFFL-212ENST00000584655 BCS1LQ9Y276 419 aa11.88□□□□□ -0.51
RFFL-212ENST00000584655 PPIP5K2O43314 1243 aa11.88□□□□□ -0.51
RFFL-212ENST00000584655 HMGN5P82970 282 aaKnown RBP11.88□□□□□ -0.51
RFFL-212ENST00000584655 RESTQ13127 1097 aa11.88□□□□□ -0.51
RFFL-212ENST00000584655 TBC1D16Q8TBP0 767 aa11.88□□□□□ -0.51
RFFL-212ENST00000584655 ANKRD2Q9GZV1 360 aa11.88□□□□□ -0.51
RFFL-212ENST00000584655 TDRD3Q9H7E2 651 aaKnown RBP11.88□□□□□ -0.51
RFFL-212ENST00000584655 TRMT1Q9NXH9 659 aaKnown RBP11.88□□□□□ -0.51
RFFL-212ENST00000584655 CLIP2Q9UDT6 1046 aa11.88□□□□□ -0.51
RFFL-212ENST00000584655 COL18A1P39060 1754 aa11.88□□□□□ -0.51
RFFL-212ENST00000584655 XIRP1Q702N8 1843 aaKnown RBP11.88□□□□□ -0.51
RFFL-212ENST00000584655 CCDC192P0DO97 292 aa11.88□□□□□ -0.51
RFFL-212ENST00000584655 ARID5BQ14865 1188 aa11.88□□□□□ -0.51
RFFL-212ENST00000584655 SF3B3Q15393 1217 aaKnown RBP11.88□□□□□ -0.51
RFFL-212ENST00000584655 KCTD1Q719H9 257 aa11.88□□□□□ -0.51
RFFL-212ENST00000584655 FAM13BQ9NYF5 915 aa11.88□□□□□ -0.51
RFFL-212ENST00000584655 PCDHB6Q9Y5E3 794 aa11.88□□□□□ -0.51
RFFL-212ENST00000584655 PNOCQ13519 176 aa11.87□□□□□ -0.51
RFFL-212ENST00000584655 SLC30A10Q6XR72 485 aa11.87□□□□□ -0.51
RFFL-212ENST00000584655 AOPEPQ8N6M6 819 aa11.87□□□□□ -0.51
RFFL-212ENST00000584655 FBXO18Q8NFZ0 1043 aa11.87□□□□□ -0.51
RFFL-212ENST00000584655 KDM3BQ7LBC6 1761 aa11.87□□□□□ -0.51
RFFL-212ENST00000584655 PDE4BQ07343 736 aa11.87□□□□□ -0.51
RFFL-212ENST00000584655 LRMPQ12912 555 aa11.87□□□□□ -0.51
RFFL-212ENST00000584655 CSPP1Q1MSJ5 1256 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms