RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 BLZF1Q9H2G9 400 aa12.95□□□□□ -0.34
TOP3A-217ENST00000584582 SERTAD1Q9UHV2 236 aa12.95□□□□□ -0.34
TOP3A-217ENST00000584582 FOXN1O15353 648 aa12.94□□□□□ -0.34
TOP3A-217ENST00000584582 SOGA3Q5TF21 947 aa12.94□□□□□ -0.34
TOP3A-217ENST00000584582 NKX2-3Q8TAU0 364 aa12.94□□□□□ -0.34
TOP3A-217ENST00000584582 TOPAZ1Q8N9V7 1692 aa12.94□□□□□ -0.34
TOP3A-217ENST00000584582 IGSF3O75054 1194 aa12.94□□□□□ -0.34
TOP3A-217ENST00000584582 AEBP2Q6ZN18 517 aaPredicted RBP12.94□□□□□ -0.34
TOP3A-217ENST00000584582 NOSTRINQ8IVI9 506 aa12.94□□□□□ -0.34
TOP3A-217ENST00000584582 SMYD4Q8IYR2 804 aaPredicted RBP12.94□□□□□ -0.34
TOP3A-217ENST00000584582 TMTC2Q8N394 836 aa12.94□□□□□ -0.34
TOP3A-217ENST00000584582 PCDHB6Q9Y5E3 794 aa12.94□□□□□ -0.34
TOP3A-217ENST00000584582 TCHHQ07283 1943 aa12.94□□□□□ -0.34
TOP3A-217ENST00000584582 BAG3O95817 575 aa12.94□□□□□ -0.34
TOP3A-217ENST00000584582 TXLNAP40222 546 aa12.94□□□□□ -0.34
TOP3A-217ENST00000584582 MECOMQ03112 1051 aa12.94□□□□□ -0.34
TOP3A-217ENST00000584582 MNS1Q8NEH6 495 aa12.94□□□□□ -0.34
TOP3A-217ENST00000584582 NYXQ9GZU5 481 aa12.94□□□□□ -0.34
TOP3A-217ENST00000584582 HPS5Q9UPZ3 1129 aa12.94□□□□□ -0.34
TOP3A-217ENST00000584582 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.93□□□□□ -0.34
TOP3A-217ENST00000584582 TRIM37O94972 964 aa12.93□□□□□ -0.34
TOP3A-217ENST00000584582 DEXIO95424 95 aa12.93□□□□□ -0.34
TOP3A-217ENST00000584582 EVX2Q03828 476 aa12.93□□□□□ -0.34
TOP3A-217ENST00000584582 CCDC96Q2M329 555 aa12.93□□□□□ -0.34
TOP3A-217ENST00000584582 SLC51AQ86UW1 340 aa12.93□□□□□ -0.34
TOP3A-217ENST00000584582 UBE2Q2Q8WVN8 375 aa12.93□□□□□ -0.34
TOP3A-217ENST00000584582 RTEL1Q9NZ71 1219 aa12.93□□□□□ -0.34
TOP3A-217ENST00000584582 PCDHA5Q9Y5H7 936 aa12.93□□□□□ -0.34
TOP3A-217ENST00000584582 MED1Q15648 1581 aaPredicted RBP12.93□□□□□ -0.34
TOP3A-217ENST00000584582 RIOK3O14730 519 aaKnown RBP12.93□□□□□ -0.34
TOP3A-217ENST00000584582 WDHD1O75717 1129 aaPredicted RBP12.93□□□□□ -0.34
TOP3A-217ENST00000584582 URI1O94763 535 aaPredicted RBP12.93□□□□□ -0.34
TOP3A-217ENST00000584582 LY9Q9HBG7 655 aa12.93□□□□□ -0.34
TOP3A-217ENST00000584582 CEP131Q9UPN4 1083 aa12.93□□□□□ -0.34
TOP3A-217ENST00000584582 LONRF3Q496Y0 759 aa12.93□□□□□ -0.34
TOP3A-217ENST00000584582 ADGRA1Q86SQ6 560 aa12.93□□□□□ -0.34
TOP3A-217ENST00000584582 ZSCAN10Q96SZ4 725 aaPredicted RBP12.93□□□□□ -0.34
TOP3A-217ENST00000584582 ZNF804BA4D1E1 1349 aa12.93□□□□□ -0.34
TOP3A-217ENST00000584582 CLSTN1O94985 981 aa12.92□□□□□ -0.34
TOP3A-217ENST00000584582 KRT2P35908 639 aa12.92□□□□□ -0.34
TOP3A-217ENST00000584582 SCNN1DP51172 638 aa12.92□□□□□ -0.34
TOP3A-217ENST00000584582 DOK7Q18PE1 504 aa12.92□□□□□ -0.34
TOP3A-217ENST00000584582 CCDC144BQ3MJ40 725 aa12.92□□□□□ -0.34
TOP3A-217ENST00000584582 TXNRD3Q86VQ6 643 aa12.92□□□□□ -0.34
TOP3A-217ENST00000584582 TEX11Q8IYF3 940 aa12.92□□□□□ -0.34
TOP3A-217ENST00000584582 ARHGEF1Q92888 912 aaKnown RBP12.92□□□□□ -0.34
TOP3A-217ENST00000584582 USP17L3A6NCW0 530 aa12.92□□□□□ -0.34
TOP3A-217ENST00000584582 USP17L4A6NCW7 530 aa12.92□□□□□ -0.34
TOP3A-217ENST00000584582 ZNF500O60304 480 aaPredicted RBP12.92□□□□□ -0.34
TOP3A-217ENST00000584582 YEATS4O95619 227 aa12.92□□□□□ -0.34
TOP3A-217ENST00000584582 TPM1P09493 284 aa12.92□□□□□ -0.34
TOP3A-217ENST00000584582 GTF2IP78347 998 aa12.92□□□□□ -0.34
TOP3A-217ENST00000584582 TCP10Q12799 353 aa12.92□□□□□ -0.34
TOP3A-217ENST00000584582 CEP135Q66GS9 1140 aa12.92□□□□□ -0.34
TOP3A-217ENST00000584582 USP17L1Q7RTZ2 530 aa12.92□□□□□ -0.34
TOP3A-217ENST00000584582 FAM84BQ96KN1 310 aaPredicted RBP12.92□□□□□ -0.34
TOP3A-217ENST00000584582 CDHR2Q9BYE9 1310 aa12.92□□□□□ -0.34
TOP3A-217ENST00000584582 CCT6AP40227 531 aaKnown RBP12.92□□□□□ -0.34
TOP3A-217ENST00000584582 SPATA31A1Q5TZJ5 1347 aa12.92□□□□□ -0.34
TOP3A-217ENST00000584582 PPFIBP1Q86W92 1011 aa12.92□□□□□ -0.34
TOP3A-217ENST00000584582 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.92□□□□□ -0.34
TOP3A-217ENST00000584582 FANCLQ9NW38 375 aa12.92□□□□□ -0.34
TOP3A-217ENST00000584582 RGPD1P0DJD0 1748 aa12.91□□□□□ -0.34
TOP3A-217ENST00000584582 IDEP14735 1019 aa12.91□□□□□ -0.34
TOP3A-217ENST00000584582 UBA7P41226 1012 aa12.91□□□□□ -0.34
TOP3A-217ENST00000584582 FANCCQ00597 558 aa12.91□□□□□ -0.34
TOP3A-217ENST00000584582 GRIN1Q05586 938 aa12.91□□□□□ -0.34
TOP3A-217ENST00000584582 SLC39A14Q15043 492 aa12.91□□□□□ -0.34
TOP3A-217ENST00000584582 CRACR2BQ8N4Y2 399 aaPredicted RBP12.91□□□□□ -0.34
TOP3A-217ENST00000584582 ANKRD20A12PQ8NF67 263 aa12.91□□□□□ -0.34
TOP3A-217ENST00000584582 CDK5RAP3Q96JB5 506 aa12.91□□□□□ -0.34
TOP3A-217ENST00000584582 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.91□□□□□ -0.34
TOP3A-217ENST00000584582 TSR1Q2NL82 804 aaKnown RBP12.91□□□□□ -0.34
TOP3A-217ENST00000584582 USP49Q70CQ1 688 aa12.91□□□□□ -0.34
TOP3A-217ENST00000584582 PDCL2Q8N4E4 241 aa12.91□□□□□ -0.34
TOP3A-217ENST00000584582 EPSTI1Q96J88 318 aa12.91□□□□□ -0.34
TOP3A-217ENST00000584582 NTSR2O95665 410 aa12.91□□□□□ -0.34
TOP3A-217ENST00000584582 NFIXQ14938 502 aa12.91□□□□□ -0.34
TOP3A-217ENST00000584582 LETM2Q2VYF4 491 aa12.91□□□□□ -0.34
TOP3A-217ENST00000584582 MFSD14BQ5SR56 506 aa12.91□□□□□ -0.34
TOP3A-217ENST00000584582 RRAGBQ5VZM2 374 aa12.91□□□□□ -0.34
TOP3A-217ENST00000584582 NOC3LQ8WTT2 800 aaKnown RBP12.91□□□□□ -0.34
TOP3A-217ENST00000584582 UBA5Q9GZZ9 404 aa12.91□□□□□ -0.34
TOP3A-217ENST00000584582 GPCPD1Q9NPB8 672 aa12.91□□□□□ -0.34
TOP3A-217ENST00000584582 DNAI1Q9UI46 699 aa12.91□□□□□ -0.34
TOP3A-217ENST00000584582 NFE2L3Q9Y4A8 694 aa12.91□□□□□ -0.34
TOP3A-217ENST00000584582 KIF5BP33176 963 aa12.9□□□□□ -0.34
TOP3A-217ENST00000584582 NAPAP54920 295 aa12.9□□□□□ -0.34
TOP3A-217ENST00000584582 PDE4CQ08493 712 aa12.9□□□□□ -0.34
TOP3A-217ENST00000584582 ENOX2Q16206 610 aaKnown RBP12.9□□□□□ -0.34
TOP3A-217ENST00000584582 PLA2G12BQ9BX93 195 aa12.9□□□□□ -0.34
TOP3A-217ENST00000584582 SEC63Q9UGP8 760 aaKnown RBP12.9□□□□□ -0.34
TOP3A-217ENST00000584582 ST5P78524 1137 aa12.9□□□□□ -0.34
TOP3A-217ENST00000584582 UBE4AQ14139 1066 aa12.9□□□□□ -0.34
TOP3A-217ENST00000584582 KARSQ15046 597 aaKnown RBP12.9□□□□□ -0.34
TOP3A-217ENST00000584582 FILIP1LQ4L180 1135 aa12.9□□□□□ -0.34
TOP3A-217ENST00000584582 SYT10Q6XYQ8 523 aa12.9□□□□□ -0.34
TOP3A-217ENST00000584582 IGDCC4Q8TDY8 1250 aa12.9□□□□□ -0.34
TOP3A-217ENST00000584582 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.9□□□□□ -0.34
TOP3A-217ENST00000584582 ZC3H12CQ9C0D7 883 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms