RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 ANXA1P04083 346 aa13.85□□□□□ -0.19
PCDHGA9-201ENST00000573521 PARP1P09874 1014 aaKnown RBP13.85□□□□□ -0.19
PCDHGA9-201ENST00000573521 TCP1P17987 556 aaKnown RBP13.85□□□□□ -0.19
PCDHGA9-201ENST00000573521 CLEC17AQ6ZS10 378 aa13.85□□□□□ -0.19
PCDHGA9-201ENST00000573521 ARHGAP24Q8N264 748 aa13.85□□□□□ -0.19
PCDHGA9-201ENST00000573521 SMARCC2Q8TAQ2 1214 aa13.85□□□□□ -0.19
PCDHGA9-201ENST00000573521 CEP63Q96MT8 703 aa13.85□□□□□ -0.19
PCDHGA9-201ENST00000573521 REREQ9P2R6 1566 aa13.85□□□□□ -0.19
PCDHGA9-201ENST00000573521 CWF19L2Q2TBE0 894 aaKnown RBP13.85□□□□□ -0.19
PCDHGA9-201ENST00000573521 ANTXR1Q9H6X2 564 aa13.85□□□□□ -0.19
PCDHGA9-201ENST00000573521 MLH3Q9UHC1 1453 aa13.85□□□□□ -0.19
PCDHGA9-201ENST00000573521 GOLGA8KD6RF30 607 aa13.84□□□□□ -0.19
PCDHGA9-201ENST00000573521 INPP5BP32019 993 aa13.84□□□□□ -0.19
PCDHGA9-201ENST00000573521 KRT40Q6A162 431 aa13.84□□□□□ -0.19
PCDHGA9-201ENST00000573521 CARD6Q9BX69 1037 aa13.84□□□□□ -0.19
PCDHGA9-201ENST00000573521 USH1CQ9Y6N9 552 aa13.84□□□□□ -0.19
PCDHGA9-201ENST00000573521 USP19O94966 1318 aa13.84□□□□□ -0.19
PCDHGA9-201ENST00000573521 GOLGA6BA6NDN3 693 aa13.84□□□□□ -0.19
PCDHGA9-201ENST00000573521 H7C1D1 291 aa13.84□□□□□ -0.19
PCDHGA9-201ENST00000573521 NDUFAB1O14561 156 aa13.84□□□□□ -0.19
PCDHGA9-201ENST00000573521 TRAPPC10P48553 1259 aa13.84□□□□□ -0.19
PCDHGA9-201ENST00000573521 CCDC14Q49A88 953 aa13.84□□□□□ -0.19
PCDHGA9-201ENST00000573521 APBB1IPQ7Z5R6 666 aaPredicted RBP13.84□□□□□ -0.19
PCDHGA9-201ENST00000573521 OR8K1Q8NGG5 319 aa13.84□□□□□ -0.19
PCDHGA9-201ENST00000573521 NT5C3AQ9H0P0 336 aa13.84□□□□□ -0.19
PCDHGA9-201ENST00000573521 FRMD4BQ9Y2L6 1034 aa13.84□□□□□ -0.19
PCDHGA9-201ENST00000573521 UTP11Q9Y3A2 253 aaKnown RBP13.84□□□□□ -0.19
PCDHGA9-201ENST00000573521 SH3TC1Q8TE82 1336 aa13.84□□□□□ -0.19
PCDHGA9-201ENST00000573521 C6orf229H3BNL8 230 aa13.84□□□□□ -0.19
PCDHGA9-201ENST00000573521 DNM2P50570 870 aa13.84□□□□□ -0.19
PCDHGA9-201ENST00000573521 DNA2P51530 1060 aa13.84□□□□□ -0.19
PCDHGA9-201ENST00000573521 EIF4A1P60842 406 aaKnown RBP13.84□□□□□ -0.19
PCDHGA9-201ENST00000573521 CSGALNACT2Q8N6G5 542 aa13.84□□□□□ -0.19
PCDHGA9-201ENST00000573521 MAGEB6Q8N7X4 407 aa13.84□□□□□ -0.19
PCDHGA9-201ENST00000573521 RETREG2Q8NC44 543 aa13.84□□□□□ -0.19
PCDHGA9-201ENST00000573521 BCL2L12Q9HB09 334 aa13.84□□□□□ -0.19
PCDHGA9-201ENST00000573521 RNF14Q9UBS8 474 aa13.84□□□□□ -0.19
PCDHGA9-201ENST00000573521 PUF60Q9UHX1 559 aaKnown RBP13.84□□□□□ -0.19
PCDHGA9-201ENST00000573521 MACROD2A1Z1Q3 448 aa13.84□□□□□ -0.19
PCDHGA9-201ENST00000573521 KRT9P35527 623 aa13.84□□□□□ -0.19
PCDHGA9-201ENST00000573521 GRIPAP1Q4V328 841 aa13.84□□□□□ -0.19
PCDHGA9-201ENST00000573521 DZIP3Q86Y13 1208 aaKnown RBP13.84□□□□□ -0.19
PCDHGA9-201ENST00000573521 RTEL1Q9NZ71 1219 aa13.84□□□□□ -0.19
PCDHGA9-201ENST00000573521 GPAA1O43292 621 aa13.83□□□□□ -0.19
PCDHGA9-201ENST00000573521 PPP6R2O75170 966 aa13.83□□□□□ -0.19
PCDHGA9-201ENST00000573521 RUNDC3BQ96NL0 473 aa13.83□□□□□ -0.19
PCDHGA9-201ENST00000573521 EYA3Q99504 573 aa13.83□□□□□ -0.19
PCDHGA9-201ENST00000573521 RAB17Q9H0T7 212 aa13.83□□□□□ -0.19
PCDHGA9-201ENST00000573521 PNMA2Q9UL42 364 aa13.83□□□□□ -0.19
PCDHGA9-201ENST00000573521 EXOC7Q9UPT5 735 aa13.83□□□□□ -0.19
PCDHGA9-201ENST00000573521 GSPT1P15170 499 aaKnown RBP13.83□□□□□ -0.2
PCDHGA9-201ENST00000573521 SNX16P57768 344 aa13.83□□□□□ -0.2
PCDHGA9-201ENST00000573521 G2E3Q7L622 706 aa13.83□□□□□ -0.2
PCDHGA9-201ENST00000573521 WDR66Q8TBY9 1149 aa13.83□□□□□ -0.2
PCDHGA9-201ENST00000573521 FAM71BQ8TC56 605 aa13.83□□□□□ -0.2
PCDHGA9-201ENST00000573521 PLEKHF1Q96S99 279 aa13.83□□□□□ -0.2
PCDHGA9-201ENST00000573521 TMX1Q9H3N1 280 aa13.83□□□□□ -0.2
PCDHGA9-201ENST00000573521 ATP6V0A2Q9Y487 856 aa13.83□□□□□ -0.2
PCDHGA9-201ENST00000573521 ERVK-7P63135 1459 aa13.83□□□□□ -0.2
PCDHGA9-201ENST00000573521 RHOXF2BP0C7M4 288 aa13.83□□□□□ -0.2
PCDHGA9-201ENST00000573521 SEMA3FQ13275 785 aa13.83□□□□□ -0.2
PCDHGA9-201ENST00000573521 RHOXF2Q9BQY4 288 aa13.83□□□□□ -0.2
PCDHGA9-201ENST00000573521 COPRSQ9NQ92 184 aa13.83□□□□□ -0.2
PCDHGA9-201ENST00000573521 PTCH1Q13635 1447 aa13.83□□□□□ -0.2
PCDHGA9-201ENST00000573521 PHLPP2Q6ZVD8 1323 aa13.83□□□□□ -0.2
PCDHGA9-201ENST00000573521 KDM3AQ9Y4C1 1321 aa13.83□□□□□ -0.2
PCDHGA9-201ENST00000573521 LDHBP07195 334 aaKnown RBP13.83□□□□□ -0.2
PCDHGA9-201ENST00000573521 NONOQ15233 471 aaKnown RBP eCLIP13.83□□□□□ -0.2
PCDHGA9-201ENST00000573521 SLC52A2Q9HAB3 445 aa13.83□□□□□ -0.2
PCDHGA9-201ENST00000573521 LAD1O00515 517 aa13.82□□□□□ -0.2
PCDHGA9-201ENST00000573521 PDE4DQ08499 809 aa13.82□□□□□ -0.2
PCDHGA9-201ENST00000573521 NBPF14Q5TI25 921 aa13.82□□□□□ -0.2
PCDHGA9-201ENST00000573521 KRBA2Q6ZNG9 492 aa13.82□□□□□ -0.2
PCDHGA9-201ENST00000573521 MAP4K1Q92918 833 aa13.82□□□□□ -0.2
PCDHGA9-201ENST00000573521 IWS1Q96ST2 819 aa13.82□□□□□ -0.2
PCDHGA9-201ENST00000573521 ATG3Q9NT62 314 aa13.82□□□□□ -0.2
PCDHGA9-201ENST00000573521 MBD4O95243 580 aa13.82□□□□□ -0.2
PCDHGA9-201ENST00000573521 MAGEA1P43355 309 aa13.82□□□□□ -0.2
PCDHGA9-201ENST00000573521 LRRC8AQ8IWT6 810 aa13.82□□□□□ -0.2
PCDHGA9-201ENST00000573521 NFATC2IPQ8NCF5 419 aa13.82□□□□□ -0.2
PCDHGA9-201ENST00000573521 SAR1BQ9Y6B6 198 aa13.82□□□□□ -0.2
PCDHGA9-201ENST00000573521 SAMD9LQ8IVG5 1584 aa13.82□□□□□ -0.2
PCDHGA9-201ENST00000573521 PREX2Q70Z35 1606 aa13.82□□□□□ -0.2
PCDHGA9-201ENST00000573521 MCM7P33993 719 aa13.82□□□□□ -0.2
PCDHGA9-201ENST00000573521 ATP11AP98196 1134 aa13.82□□□□□ -0.2
PCDHGA9-201ENST00000573521 ELF2Q15723 593 aa13.82□□□□□ -0.2
PCDHGA9-201ENST00000573521 ASIC2Q16515 512 aa13.82□□□□□ -0.2
PCDHGA9-201ENST00000573521 LMNTD2Q8IXW0 634 aa13.82□□□□□ -0.2
PCDHGA9-201ENST00000573521 HAUS7Q99871 368 aa13.82□□□□□ -0.2
PCDHGA9-201ENST00000573521 VAT1LQ9HCJ6 419 aa13.82□□□□□ -0.2
PCDHGA9-201ENST00000573521 ERVV-2B6SEH9 535 aa13.81□□□□□ -0.2
PCDHGA9-201ENST00000573521 RASSF2P50749 326 aa13.81□□□□□ -0.2
PCDHGA9-201ENST00000573521 POLR3EQ9NVU0 708 aa13.81□□□□□ -0.2
PCDHGA9-201ENST00000573521 MCM9Q9NXL9 1143 aa13.81□□□□□ -0.2
PCDHGA9-201ENST00000573521 VWA3AA6NCI4 1184 aa13.81□□□□□ -0.2
PCDHGA9-201ENST00000573521 RFC4P35249 363 aa13.81□□□□□ -0.2
PCDHGA9-201ENST00000573521 ZBTB16Q05516 673 aa13.81□□□□□ -0.2
PCDHGA9-201ENST00000573521 ERCC6LQ2NKX8 1250 aa13.81□□□□□ -0.2
PCDHGA9-201ENST00000573521 CDC37L1Q7L3B6 337 aa13.81□□□□□ -0.2
PCDHGA9-201ENST00000573521 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms