RNA–Protein interactions for RNA: ENST00000573270.1

LINC01996-201, Transcript of long intergenic non-protein coding RNA 1996, humanhuman

TSL 1 (best) BASIC

Gene LINC01996, Length 1,273 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01996-201ENST00000573270 USP26Q9BXU7 913 aa16.08■□□□□ 0.16
LINC01996-201ENST00000573270 PGAP2Q9UHJ9 254 aa16.08■□□□□ 0.16
LINC01996-201ENST00000573270 SLC27A2O14975 620 aa16.07■□□□□ 0.16
LINC01996-201ENST00000573270 CYP21A2P08686 494 aa16.07■□□□□ 0.16
LINC01996-201ENST00000573270 IMMTQ16891 758 aaKnown RBP16.07■□□□□ 0.16
LINC01996-201ENST00000573270 C12orf60Q5U649 245 aa16.07■□□□□ 0.16
LINC01996-201ENST00000573270 CREB3L3Q68CJ9 461 aa16.07■□□□□ 0.16
LINC01996-201ENST00000573270 USP48Q86UV5 1035 aa16.07■□□□□ 0.16
LINC01996-201ENST00000573270 CDCA5Q96FF9 252 aa16.07■□□□□ 0.16
LINC01996-201ENST00000573270 DYNLL2Q96FJ2 89 aa16.07■□□□□ 0.16
LINC01996-201ENST00000573270 DNAJC18Q9H819 358 aa16.07■□□□□ 0.16
LINC01996-201ENST00000573270 CTNNA3Q9UI47 895 aa16.07■□□□□ 0.16
LINC01996-201ENST00000573270 NEDD4P46934 1319 aa16.07■□□□□ 0.16
LINC01996-201ENST00000573270 TRAF5O00463 557 aa16.06■□□□□ 0.16
LINC01996-201ENST00000573270 EIF5BO60841 1220 aaKnown RBP16.06■□□□□ 0.16
LINC01996-201ENST00000573270 MCCP23508 829 aa16.06■□□□□ 0.16
LINC01996-201ENST00000573270 HSPA4P34932 840 aa16.06■□□□□ 0.16
LINC01996-201ENST00000573270 NBPF12Q5TAG4 269 aaPredicted RBP16.06■□□□□ 0.16
LINC01996-201ENST00000573270 DHX36Q9H2U1 1008 aaKnown RBP16.06■□□□□ 0.16
LINC01996-201ENST00000573270 TACC3Q9Y6A5 838 aa16.06■□□□□ 0.16
LINC01996-201ENST00000573270 ZNF213O14771 459 aa16.05■□□□□ 0.16
LINC01996-201ENST00000573270 EPB41L2O43491 1005 aaKnown RBP16.05■□□□□ 0.16
LINC01996-201ENST00000573270 FMR1Q06787 632 aaKnown RBP eCLIP16.05■□□□□ 0.16
LINC01996-201ENST00000573270 NECTIN1Q15223 517 aa16.05■□□□□ 0.16
LINC01996-201ENST00000573270 CHADLQ6NUI6 762 aa16.05■□□□□ 0.16
LINC01996-201ENST00000573270 STOX1Q6ZVD7 989 aa16.05■□□□□ 0.16
LINC01996-201ENST00000573270 TTC6Q86TZ1 520 aa16.05■□□□□ 0.16
LINC01996-201ENST00000573270 CRACR2BQ8N4Y2 399 aaPredicted RBP16.05■□□□□ 0.16
LINC01996-201ENST00000573270 TRIM34Q9BYJ4 488 aa16.05■□□□□ 0.16
LINC01996-201ENST00000573270 EHD4Q9H223 541 aa16.05■□□□□ 0.16
LINC01996-201ENST00000573270 UPF2Q9HAU5 1272 aaKnown RBP16.05■□□□□ 0.16
LINC01996-201ENST00000573270 ANAPC4Q9UJX5 808 aa16.05■□□□□ 0.16
LINC01996-201ENST00000573270 GABPAQ06546 454 aa16.04■□□□□ 0.16
LINC01996-201ENST00000573270 C16orf86Q6ZW13 317 aa16.04■□□□□ 0.16
LINC01996-201ENST00000573270 CDC37L1Q7L3B6 337 aa16.04■□□□□ 0.16
LINC01996-201ENST00000573270 RASEFQ8IZ41 740 aa16.04■□□□□ 0.16
LINC01996-201ENST00000573270 STAG1Q8WVM7 1258 aa16.04■□□□□ 0.16
LINC01996-201ENST00000573270 SERPINB13Q9UIV8 391 aa16.04■□□□□ 0.16
LINC01996-201ENST00000573270 FZD1Q9UP38 647 aa16.04■□□□□ 0.16
LINC01996-201ENST00000573270 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.04■□□□□ 0.16
LINC01996-201ENST00000573270 PRDM1O75626 825 aa16.03■□□□□ 0.16
LINC01996-201ENST00000573270 RNF20Q5VTR2 975 aa16.03■□□□□ 0.16
LINC01996-201ENST00000573270 ZNF408Q9H9D4 720 aa16.03■□□□□ 0.16
LINC01996-201ENST00000573270 INCENPQ9NQS7 918 aa16.03■□□□□ 0.16
LINC01996-201ENST00000573270 PI4KBQ9UBF8 816 aa16.03■□□□□ 0.16
LINC01996-201ENST00000573270 SNX14Q9Y5W7 946 aa16.03■□□□□ 0.16
LINC01996-201ENST00000573270 E7EWF7 191 aa16.02■□□□□ 0.16
LINC01996-201ENST00000573270 SLC3A2P08195 630 aaKnown RBP16.02■□□□□ 0.16
LINC01996-201ENST00000573270 SHMT1P34896 483 aa16.02■□□□□ 0.16
LINC01996-201ENST00000573270 PRKG1Q13976 671 aa16.02■□□□□ 0.16
LINC01996-201ENST00000573270 RRP12Q5JTH9 1297 aaKnown RBP16.02■□□□□ 0.16
LINC01996-201ENST00000573270 AKNAD1Q5T1N1 836 aa16.02■□□□□ 0.16
LINC01996-201ENST00000573270 MIGA2Q7L4E1 593 aa16.02■□□□□ 0.16
LINC01996-201ENST00000573270 NKX2-3Q8TAU0 364 aa16.02■□□□□ 0.16
LINC01996-201ENST00000573270 KCNB2Q92953 911 aa16.02■□□□□ 0.16
LINC01996-201ENST00000573270 C22orf23Q9BZE7 217 aa16.02■□□□□ 0.16
LINC01996-201ENST00000573270 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.02■□□□□ 0.16
LINC01996-201ENST00000573270 TOMM22Q9NS69 142 aa16.02■□□□□ 0.16
LINC01996-201ENST00000573270 PHIPQ8WWQ0 1821 aa16.02■□□□□ 0.16
LINC01996-201ENST00000573270 TOMM70O94826 608 aa16.01■□□□□ 0.15
LINC01996-201ENST00000573270 ZKSCAN1P17029 563 aaPredicted RBP16.01■□□□□ 0.15
LINC01996-201ENST00000573270 CDK8P49336 464 aa16.01■□□□□ 0.15
LINC01996-201ENST00000573270 COL9A3Q14050 684 aaPredicted RBP16.01■□□□□ 0.15
LINC01996-201ENST00000573270 SHROOM1Q2M3G4 852 aaPredicted RBP16.01■□□□□ 0.15
LINC01996-201ENST00000573270 ADCK5Q3MIX3 580 aa16.01■□□□□ 0.15
LINC01996-201ENST00000573270 DCAF15Q66K64 600 aa16.01■□□□□ 0.15
LINC01996-201ENST00000573270 TBC1D32Q96NH3 1257 aa16.01■□□□□ 0.15
LINC01996-201ENST00000573270 SWAP70Q9UH65 585 aa16.01■□□□□ 0.15
LINC01996-201ENST00000573270 HERC5Q9UII4 1024 aaKnown RBP16.01■□□□□ 0.15
LINC01996-201ENST00000573270 MYH4Q9Y623 1939 aa16■□□□□ 0.15
LINC01996-201ENST00000573270 GDF11O95390 407 aa16■□□□□ 0.15
LINC01996-201ENST00000573270 RASA1P20936 1047 aa16■□□□□ 0.15
LINC01996-201ENST00000573270 NF2P35240 595 aa16■□□□□ 0.15
LINC01996-201ENST00000573270 PDE4BQ07343 736 aa16■□□□□ 0.15
LINC01996-201ENST00000573270 METTL16Q86W50 562 aaKnown RBP16■□□□□ 0.15
LINC01996-201ENST00000573270 SMC1BQ8NDV3 1235 aa16■□□□□ 0.15
LINC01996-201ENST00000573270 HOOK2Q96ED9 719 aa16■□□□□ 0.15
LINC01996-201ENST00000573270 RNF41Q9H4P4 317 aaPredicted RBP16■□□□□ 0.15
LINC01996-201ENST00000573270 PLIN4Q96Q06 1357 aa16■□□□□ 0.15
LINC01996-201ENST00000573270 B4E1Z4 1266 aa15.99■□□□□ 0.15
LINC01996-201ENST00000573270 ORC4O43929 436 aa15.99■□□□□ 0.15
LINC01996-201ENST00000573270 RBM25P49756 843 aaKnown RBP15.99■□□□□ 0.15
LINC01996-201ENST00000573270 RRP1BQ14684 758 aaKnown RBP15.99■□□□□ 0.15
LINC01996-201ENST00000573270 SUPT20HL1Q3ZLR7 823 aa15.99■□□□□ 0.15
LINC01996-201ENST00000573270 MFSD6Q6ZSS7 791 aa15.99■□□□□ 0.15
LINC01996-201ENST00000573270 RALYLQ86SE5 291 aaKnown RBP15.99■□□□□ 0.15
LINC01996-201ENST00000573270 RBM46Q8TBY0 533 aaKnown RBP15.99■□□□□ 0.15
LINC01996-201ENST00000573270 JAKMIP1Q96N16 626 aaKnown RBP15.99■□□□□ 0.15
LINC01996-201ENST00000573270 ZNF341Q9BYN7 854 aa15.99■□□□□ 0.15
LINC01996-201ENST00000573270 MKNK2Q9HBH9 465 aa15.99■□□□□ 0.15
LINC01996-201ENST00000573270 CPA1P15085 419 aa15.98■□□□□ 0.15
LINC01996-201ENST00000573270 AKR1B1P15121 316 aa15.98■□□□□ 0.15
LINC01996-201ENST00000573270 KRT32Q14532 448 aa15.98■□□□□ 0.15
LINC01996-201ENST00000573270 FAM47AQ5JRC9 791 aa15.98■□□□□ 0.15
LINC01996-201ENST00000573270 TATDN1Q6P1N9 297 aa15.98■□□□□ 0.15
LINC01996-201ENST00000573270 MOB2Q70IA6 237 aa15.98■□□□□ 0.15
LINC01996-201ENST00000573270 FOXP4Q8IVH2 680 aaPredicted RBP15.98■□□□□ 0.15
LINC01996-201ENST00000573270 MB21D2Q8IYB1 491 aaPredicted RBP15.98■□□□□ 0.15
LINC01996-201ENST00000573270 WRNIP1Q96S55 665 aa15.98■□□□□ 0.15
LINC01996-201ENST00000573270 CNNM2Q9H8M5 875 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms