RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 SURF6O75683 361 aaKnown RBP18.16■□□□□ 0.5
NDE1-203ENST00000570727 CYP2E1P05181 493 aaPredicted RBP18.16■□□□□ 0.5
NDE1-203ENST00000570727 PPP4CP60510 307 aa18.16■□□□□ 0.5
NDE1-203ENST00000570727 HABP4Q5JVS0 413 aaKnown RBP18.16■□□□□ 0.5
NDE1-203ENST00000570727 CCDC158Q5M9N0 1113 aa18.16■□□□□ 0.5
NDE1-203ENST00000570727 TTC39AQ5SRH9 613 aa18.16■□□□□ 0.5
NDE1-203ENST00000570727 TREML2Q5T2D2 321 aa18.16■□□□□ 0.5
NDE1-203ENST00000570727 MIER1Q8N108 512 aa18.16■□□□□ 0.5
NDE1-203ENST00000570727 SHISA4Q96DD7 197 aa18.16■□□□□ 0.5
NDE1-203ENST00000570727 AGTPBP1Q9UPW5 1226 aa18.16■□□□□ 0.5
NDE1-203ENST00000570727 NOP58Q9Y2X3 529 aaKnown RBP18.16■□□□□ 0.5
NDE1-203ENST00000570727 ATAD5Q96QE3 1844 aa18.16■□□□□ 0.5
NDE1-203ENST00000570727 CEP290O15078 2479 aa18.15■□□□□ 0.5
NDE1-203ENST00000570727 CAP2P40123 477 aa18.15■□□□□ 0.5
NDE1-203ENST00000570727 HNRNPUQ00839 825 aaKnown RBP eCLIP18.15■□□□□ 0.5
NDE1-203ENST00000570727 SPP2Q13103 211 aa18.15■□□□□ 0.5
NDE1-203ENST00000570727 NAA16Q6N069 864 aaPredicted RBP18.15■□□□□ 0.5
NDE1-203ENST00000570727 ADGRA1Q86SQ6 560 aa18.15■□□□□ 0.5
NDE1-203ENST00000570727 ZNF512BQ96KM6 892 aaPredicted RBP18.15■□□□□ 0.5
NDE1-203ENST00000570727 CDK5RAP2Q96SN8 1893 aa18.15■□□□□ 0.5
NDE1-203ENST00000570727 SIPA1L1O43166 1804 aa18.14■□□□□ 0.5
NDE1-203ENST00000570727 CCL5P13501 91 aa18.14■□□□□ 0.49
NDE1-203ENST00000570727 ZAP70P43403 619 aa18.14■□□□□ 0.49
NDE1-203ENST00000570727 OS9Q13438 667 aaPredicted RBP18.14■□□□□ 0.49
NDE1-203ENST00000570727 PROCA1Q8NCQ7 364 aaPredicted RBP18.14■□□□□ 0.49
NDE1-203ENST00000570727 ZNF280CQ8ND82 737 aa18.14■□□□□ 0.49
NDE1-203ENST00000570727 AATFQ9NY61 560 aaKnown RBP eCLIP18.14■□□□□ 0.49
NDE1-203ENST00000570727 PI4KBQ9UBF8 816 aa18.14■□□□□ 0.49
NDE1-203ENST00000570727 GJB1P08034 283 aa18.13■□□□□ 0.49
NDE1-203ENST00000570727 GJA8P48165 433 aa18.13■□□□□ 0.49
NDE1-203ENST00000570727 FLT3LGP49771 235 aa18.13■□□□□ 0.49
NDE1-203ENST00000570727 METTL16Q86W50 562 aaKnown RBP18.13■□□□□ 0.49
NDE1-203ENST00000570727 ANKRD13CQ8N6S4 541 aa18.13■□□□□ 0.49
NDE1-203ENST00000570727 TGFBRAP1Q8WUH2 860 aa18.13■□□□□ 0.49
NDE1-203ENST00000570727 PIH1D3Q9NQM4 214 aaKnown RBP18.13■□□□□ 0.49
NDE1-203ENST00000570727 HERC5Q9UII4 1024 aaKnown RBP18.13■□□□□ 0.49
NDE1-203ENST00000570727 DBNLQ9UJU6 430 aaKnown RBP18.13■□□□□ 0.49
NDE1-203ENST00000570727 FOCADQ5VW36 1801 aa18.12■□□□□ 0.49
NDE1-203ENST00000570727 USP17L5A8MUK1 530 aa18.12■□□□□ 0.49
NDE1-203ENST00000570727 ADCY3O60266 1144 aa18.12■□□□□ 0.49
NDE1-203ENST00000570727 BAG3O95817 575 aa18.12■□□□□ 0.49
NDE1-203ENST00000570727 JAG1P78504 1218 aa18.12■□□□□ 0.49
NDE1-203ENST00000570727 SH3D19Q5HYK7 790 aa18.12■□□□□ 0.49
NDE1-203ENST00000570727 UBE2Q1Q7Z7E8 422 aa18.12■□□□□ 0.49
NDE1-203ENST00000570727 ITPRIPQ8IWB1 547 aa18.12■□□□□ 0.49
NDE1-203ENST00000570727 FTSJ3Q8IY81 847 aaKnown RBP18.12■□□□□ 0.49
NDE1-203ENST00000570727 SLAIN1Q8ND83 568 aa18.12■□□□□ 0.49
NDE1-203ENST00000570727 SMCR8Q8TEV9 937 aaPredicted RBP18.12■□□□□ 0.49
NDE1-203ENST00000570727 EAF2Q96CJ1 260 aaPredicted RBP18.12■□□□□ 0.49
NDE1-203ENST00000570727 NOL10Q9BSC4 688 aaKnown RBP18.12■□□□□ 0.49
NDE1-203ENST00000570727 TBC1D2Q9BYX2 928 aa18.12■□□□□ 0.49
NDE1-203ENST00000570727 CCDC8Q9H0W5 538 aaPredicted RBP18.12■□□□□ 0.49
NDE1-203ENST00000570727 RNF208Q9H0X6 261 aa18.12■□□□□ 0.49
NDE1-203ENST00000570727 DHX36Q9H2U1 1008 aaKnown RBP18.12■□□□□ 0.49
NDE1-203ENST00000570727 TLR7Q9NYK1 1049 aaKnown RBP18.12■□□□□ 0.49
NDE1-203ENST00000570727 BIN2Q9UBW5 565 aaPredicted RBP18.12■□□□□ 0.49
NDE1-203ENST00000570727 LOC285556D6RIA3 1793 aa18.12■□□□□ 0.49
NDE1-203ENST00000570727 PLCG2P16885 1265 aa18.11■□□□□ 0.49
NDE1-203ENST00000570727 HMGCS2P54868 508 aa18.11■□□□□ 0.49
NDE1-203ENST00000570727 UBXN2AP68543 259 aa18.11■□□□□ 0.49
NDE1-203ENST00000570727 IRF5Q13568 498 aa18.11■□□□□ 0.49
NDE1-203ENST00000570727 MAPKAPK5Q8IW41 473 aa18.11■□□□□ 0.49
NDE1-203ENST00000570727 NKX2-3Q8TAU0 364 aa18.11■□□□□ 0.49
NDE1-203ENST00000570727 UNC93B1Q9H1C4 597 aa18.11■□□□□ 0.49
NDE1-203ENST00000570727 DNAJC18Q9H819 358 aa18.11■□□□□ 0.49
NDE1-203ENST00000570727 MAST2Q6P0Q8 1798 aa18.1■□□□□ 0.49
NDE1-203ENST00000570727 TNPO2O14787 897 aaKnown RBP18.1■□□□□ 0.49
NDE1-203ENST00000570727 IGSF3O75054 1194 aa18.1■□□□□ 0.49
NDE1-203ENST00000570727 ELNP15502 786 aa18.1■□□□□ 0.49
NDE1-203ENST00000570727 FOXP4Q8IVH2 680 aaPredicted RBP18.1■□□□□ 0.49
NDE1-203ENST00000570727 PXYLP1Q8TE99 480 aa18.1■□□□□ 0.49
NDE1-203ENST00000570727 WDR18Q9BV38 432 aa18.1■□□□□ 0.49
NDE1-203ENST00000570727 PNMA3Q9UL41 463 aa18.1■□□□□ 0.49
NDE1-203ENST00000570727 FLT1P17948 1338 aa18.09■□□□□ 0.49
NDE1-203ENST00000570727 H0YGN5 161 aa18.09■□□□□ 0.49
NDE1-203ENST00000570727 DYNLL1P63167 89 aaKnown RBP18.09■□□□□ 0.49
NDE1-203ENST00000570727 FAM110CQ1W6H9 321 aa18.09■□□□□ 0.49
NDE1-203ENST00000570727 SHROOM1Q2M3G4 852 aaPredicted RBP18.09■□□□□ 0.49
NDE1-203ENST00000570727 CEP85Q6P2H3 762 aa18.09■□□□□ 0.49
NDE1-203ENST00000570727 ASCC2Q9H1I8 757 aaPredicted RBP18.09■□□□□ 0.49
NDE1-203ENST00000570727 PALD1Q9ULE6 856 aa18.09■□□□□ 0.49
NDE1-203ENST00000570727 COLQQ9Y215 455 aaPredicted RBP18.09■□□□□ 0.49
NDE1-203ENST00000570727 AS3MTQ9HBK9 375 aa18.08■□□□□ 0.48
NDE1-203ENST00000570727 SGPL1O95470 568 aa18.07■□□□□ 0.48
NDE1-203ENST00000570727 INHAP05111 366 aa18.07■□□□□ 0.48
NDE1-203ENST00000570727 ASNSP08243 561 aa18.07■□□□□ 0.48
NDE1-203ENST00000570727 CYP7A1P22680 504 aa18.07■□□□□ 0.48
NDE1-203ENST00000570727 GCLCP48506 637 aaPredicted RBP18.07■□□□□ 0.48
NDE1-203ENST00000570727 PABPC4Q13310 644 aaKnown RBP eCLIP18.07■□□□□ 0.48
NDE1-203ENST00000570727 U2AF1L4Q8WU68 220 aaKnown RBP18.07■□□□□ 0.48
NDE1-203ENST00000570727 COA7Q96BR5 231 aa18.07■□□□□ 0.48
NDE1-203ENST00000570727 SAP30BPQ9UHR5 308 aaKnown RBP18.07■□□□□ 0.48
NDE1-203ENST00000570727 NDUFB9Q9Y6M9 179 aa18.07■□□□□ 0.48
NDE1-203ENST00000570727 RANBP2P49792 3224 aaKnown RBP18.07■□□□□ 0.48
NDE1-203ENST00000570727 MYH1P12882 1939 aa18.06■□□□□ 0.48
NDE1-203ENST00000570727 BACE1P56817 501 aa18.06■□□□□ 0.48
NDE1-203ENST00000570727 MTMR2Q13614 643 aa18.06■□□□□ 0.48
NDE1-203ENST00000570727 PANK1Q8TE04 598 aa18.06■□□□□ 0.48
NDE1-203ENST00000570727 DPF3Q92784 378 aa18.06■□□□□ 0.48
NDE1-203ENST00000570727 ANTXR1Q9H6X2 564 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms