RNA–Protein interactions for RNA: ENST00000561790.1

RAB43P1-201, Transcript of RAB43 pseudogene 1, humanhuman

BASIC

Gene RAB43P1, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43P1-201ENST00000561790 SPP2Q13103 211 aa18.87■□□□□ 0.61
RAB43P1-201ENST00000561790 PXYLP1Q8TE99 480 aa18.87■□□□□ 0.61
RAB43P1-201ENST00000561790 ZNF384Q8TF68 577 aa18.87■□□□□ 0.61
RAB43P1-201ENST00000561790 LRP2BPQ9P2M1 347 aa18.87■□□□□ 0.61
RAB43P1-201ENST00000561790 NR2E3Q9Y5X4 410 aa18.87■□□□□ 0.61
RAB43P1-201ENST00000561790 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.87■□□□□ 0.61
RAB43P1-201ENST00000561790 TFRCP02786 760 aaKnown RBP18.86■□□□□ 0.61
RAB43P1-201ENST00000561790 UQCRFS1P1P0C7P4 283 aa18.86■□□□□ 0.61
RAB43P1-201ENST00000561790 ARID4AP29374 1257 aaPredicted RBP18.86■□□□□ 0.61
RAB43P1-201ENST00000561790 PABPC4Q13310 644 aaKnown RBP eCLIP18.86■□□□□ 0.61
RAB43P1-201ENST00000561790 IRF5Q13568 498 aa18.86■□□□□ 0.61
RAB43P1-201ENST00000561790 TREML2Q5T2D2 321 aa18.86■□□□□ 0.61
RAB43P1-201ENST00000561790 UBE2Q1Q7Z7E8 422 aa18.86■□□□□ 0.61
RAB43P1-201ENST00000561790 TEX11Q8IYF3 940 aa18.86■□□□□ 0.61
RAB43P1-201ENST00000561790 PROCA1Q8NCQ7 364 aaPredicted RBP18.86■□□□□ 0.61
RAB43P1-201ENST00000561790 ZNF280CQ8ND82 737 aa18.86■□□□□ 0.61
RAB43P1-201ENST00000561790 FRAT1Q92837 279 aaPredicted RBP18.86■□□□□ 0.61
RAB43P1-201ENST00000561790 TBC1D2Q9BYX2 928 aa18.86■□□□□ 0.61
RAB43P1-201ENST00000561790 PHIPQ8WWQ0 1821 aa18.86■□□□□ 0.61
RAB43P1-201ENST00000561790 TRIM27P14373 513 aa18.84■□□□□ 0.61
RAB43P1-201ENST00000561790 CAPN2P17655 700 aa18.84■□□□□ 0.61
RAB43P1-201ENST00000561790 CAP2P40123 477 aa18.84■□□□□ 0.61
RAB43P1-201ENST00000561790 MCAMP43121 646 aa18.84■□□□□ 0.61
RAB43P1-201ENST00000561790 GCLCP48506 637 aaPredicted RBP18.84■□□□□ 0.61
RAB43P1-201ENST00000561790 HMGCS2P54868 508 aa18.84■□□□□ 0.61
RAB43P1-201ENST00000561790 FAM110CQ1W6H9 321 aa18.84■□□□□ 0.61
RAB43P1-201ENST00000561790 DEFB118Q96PH6 123 aa18.84■□□□□ 0.61
RAB43P1-201ENST00000561790 RBM27Q9P2N5 1060 aaKnown RBP18.84■□□□□ 0.61
RAB43P1-201ENST00000561790 COL2A1P02458 1487 aaPredicted RBP18.84■□□□□ 0.61
RAB43P1-201ENST00000561790 PNMA6EA0A0J9YXQ4 647 aa18.83■□□□□ 0.6
RAB43P1-201ENST00000561790 USP17L5A8MUK1 530 aa18.83■□□□□ 0.6
RAB43P1-201ENST00000561790 BAG3O95817 575 aa18.83■□□□□ 0.6
RAB43P1-201ENST00000561790 ATF7IPQ6VMQ6 1270 aa18.83■□□□□ 0.6
RAB43P1-201ENST00000561790 SH3RF3Q8TEJ3 882 aaPredicted RBP18.83■□□□□ 0.6
RAB43P1-201ENST00000561790 CLUAP1Q96AJ1 413 aa18.83■□□□□ 0.6
RAB43P1-201ENST00000561790 AS3MTQ9HBK9 375 aa18.83■□□□□ 0.6
RAB43P1-201ENST00000561790 HERC5Q9UII4 1024 aaKnown RBP18.83■□□□□ 0.6
RAB43P1-201ENST00000561790 DOCK3Q8IZD9 2030 aa18.83■□□□□ 0.6
RAB43P1-201ENST00000561790 OS9Q13438 667 aaPredicted RBP18.82■□□□□ 0.6
RAB43P1-201ENST00000561790 TTC39AQ5SRH9 613 aa18.82■□□□□ 0.6
RAB43P1-201ENST00000561790 NAA16Q6N069 864 aaPredicted RBP18.82■□□□□ 0.6
RAB43P1-201ENST00000561790 DHX36Q9H2U1 1008 aaKnown RBP18.82■□□□□ 0.6
RAB43P1-201ENST00000561790 SNRKQ9NRH2 765 aa18.82■□□□□ 0.6
RAB43P1-201ENST00000561790 PI4KBQ9UBF8 816 aa18.82■□□□□ 0.6
RAB43P1-201ENST00000561790 CCER2I3L3R5 266 aa18.81■□□□□ 0.6
RAB43P1-201ENST00000561790 EVI5O60447 810 aa18.81■□□□□ 0.6
RAB43P1-201ENST00000561790 PLCG2P16885 1265 aa18.81■□□□□ 0.6
RAB43P1-201ENST00000561790 CCDC158Q5M9N0 1113 aa18.81■□□□□ 0.6
RAB43P1-201ENST00000561790 TRIM34Q9BYJ4 488 aa18.81■□□□□ 0.6
RAB43P1-201ENST00000561790 ASCC2Q9H1I8 757 aaPredicted RBP18.81■□□□□ 0.6
RAB43P1-201ENST00000561790 AATFQ9NY61 560 aaKnown RBP eCLIP18.81■□□□□ 0.6
RAB43P1-201ENST00000561790 TNNQ9UQP3 1299 aa18.81■□□□□ 0.6
RAB43P1-201ENST00000561790 ZBTB7BO15156 539 aaPredicted RBP18.8■□□□□ 0.6
RAB43P1-201ENST00000561790 BCAR3O75815 825 aa18.8■□□□□ 0.6
RAB43P1-201ENST00000561790 RRP1BQ14684 758 aaKnown RBP18.8■□□□□ 0.6
RAB43P1-201ENST00000561790 PAK6Q9NQU5 681 aaPredicted RBP18.8■□□□□ 0.6
RAB43P1-201ENST00000561790 TMOD4Q9NZQ9 345 aa18.8■□□□□ 0.6
RAB43P1-201ENST00000561790 RANBP2P49792 3224 aaKnown RBP18.79■□□□□ 0.6
RAB43P1-201ENST00000561790 ASNSP08243 561 aa18.79■□□□□ 0.6
RAB43P1-201ENST00000561790 IRX3P78415 501 aaPredicted RBP18.79■□□□□ 0.6
RAB43P1-201ENST00000561790 SH3D19Q5HYK7 790 aa18.79■□□□□ 0.6
RAB43P1-201ENST00000561790 CRACR2BQ8N4Y2 399 aaPredicted RBP18.79■□□□□ 0.6
RAB43P1-201ENST00000561790 TGFBRAP1Q8WUH2 860 aa18.79■□□□□ 0.6
RAB43P1-201ENST00000561790 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.79■□□□□ 0.6
RAB43P1-201ENST00000561790 ATAD5Q96QE3 1844 aa18.79■□□□□ 0.6
RAB43P1-201ENST00000561790 HMGCRP04035 888 aa18.78■□□□□ 0.6
RAB43P1-201ENST00000561790 MTMR2Q13614 643 aa18.78■□□□□ 0.6
RAB43P1-201ENST00000561790 TNNI3KQ59H18 835 aa18.78■□□□□ 0.6
RAB43P1-201ENST00000561790 MAPKAPK5Q8IW41 473 aa18.78■□□□□ 0.6
RAB43P1-201ENST00000561790 PAWRQ96IZ0 340 aaKnown RBP18.78■□□□□ 0.6
RAB43P1-201ENST00000561790 DBNDD2Q9BQY9 259 aa18.78■□□□□ 0.6
RAB43P1-201ENST00000561790 WDR18Q9BV38 432 aa18.78■□□□□ 0.6
RAB43P1-201ENST00000561790 GPR108Q9NPR9 543 aa18.78■□□□□ 0.6
RAB43P1-201ENST00000561790 FPGT-TNNI3KV9GXZ4 949 aa18.78■□□□□ 0.6
RAB43P1-201ENST00000561790 LOC285556D6RIA3 1793 aa18.78■□□□□ 0.6
RAB43P1-201ENST00000561790 BACE1P56817 501 aa18.77■□□□□ 0.6
RAB43P1-201ENST00000561790 PPP4CP60510 307 aa18.77■□□□□ 0.6
RAB43P1-201ENST00000561790 ZKSCAN2Q63HK3 967 aa18.77■□□□□ 0.6
RAB43P1-201ENST00000561790 NECAB2Q7Z6G3 386 aa18.77■□□□□ 0.6
RAB43P1-201ENST00000561790 FOXP4Q8IVH2 680 aaPredicted RBP18.77■□□□□ 0.6
RAB43P1-201ENST00000561790 TMEM57Q8N5G2 664 aa18.77■□□□□ 0.6
RAB43P1-201ENST00000561790 CRISPLD2Q9H0B8 497 aa18.77■□□□□ 0.6
RAB43P1-201ENST00000561790 SURF6O75683 361 aaKnown RBP18.76■□□□□ 0.59
RAB43P1-201ENST00000561790 POLA2Q14181 598 aa18.76■□□□□ 0.59
RAB43P1-201ENST00000561790 HMX1Q9NP08 348 aaPredicted RBP18.76■□□□□ 0.59
RAB43P1-201ENST00000561790 MORF4L1Q9UBU8 362 aa18.76■□□□□ 0.59
RAB43P1-201ENST00000561790 GJD2Q9UKL4 321 aa18.76■□□□□ 0.59
RAB43P1-201ENST00000561790 FLT1P17948 1338 aa18.75■□□□□ 0.59
RAB43P1-201ENST00000561790 C19orf81C9J6K1 198 aa18.75■□□□□ 0.59
RAB43P1-201ENST00000561790 CYP2E1P05181 493 aaPredicted RBP18.75■□□□□ 0.59
RAB43P1-201ENST00000561790 ATP8B2P98198 1209 aa18.75■□□□□ 0.59
RAB43P1-201ENST00000561790 P2RX7Q99572 595 aaKnown RBP18.75■□□□□ 0.59
RAB43P1-201ENST00000561790 PRO3102Q9H379 93 aa18.75■□□□□ 0.59
RAB43P1-201ENST00000561790 GINM1Q9NU53 330 aa18.75■□□□□ 0.59
RAB43P1-201ENST00000561790 PALD1Q9ULE6 856 aa18.75■□□□□ 0.59
RAB43P1-201ENST00000561790 RPTORQ8N122 1335 aa18.74■□□□□ 0.59
RAB43P1-201ENST00000561790 IGSF3O75054 1194 aa18.74■□□□□ 0.59
RAB43P1-201ENST00000561790 GDF11O95390 407 aa18.74■□□□□ 0.59
RAB43P1-201ENST00000561790 HLA-DOAP06340 250 aa18.74■□□□□ 0.59
RAB43P1-201ENST00000561790 HOXA7P31268 230 aaPredicted RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms