RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 F13A1P00488 732 aa15.32■□□□□ 0.04
CSPG4P12-202ENST00000559989 TRIM55Q9BYV6 548 aa15.32■□□□□ 0.04
CSPG4P12-202ENST00000559989 HOMER3Q9NSC5 361 aa15.32■□□□□ 0.04
CSPG4P12-202ENST00000559989 BACH1O14867 736 aa15.32■□□□□ 0.04
CSPG4P12-202ENST00000559989 ATL3Q6DD88 541 aa15.32■□□□□ 0.04
CSPG4P12-202ENST00000559989 POTEB3A0JP26 581 aa15.32■□□□□ 0.04
CSPG4P12-202ENST00000559989 OATP04181 439 aa15.32■□□□□ 0.04
CSPG4P12-202ENST00000559989 U2AF2P26368 475 aaKnown RBP eCLIP15.32■□□□□ 0.04
CSPG4P12-202ENST00000559989 CASP2P42575 452 aa15.32■□□□□ 0.04
CSPG4P12-202ENST00000559989 POTEBQ6S5H4 581 aa15.32■□□□□ 0.04
CSPG4P12-202ENST00000559989 KIFC3Q9BVG8 833 aa15.32■□□□□ 0.04
CSPG4P12-202ENST00000559989 PALMDQ9NP74 551 aa15.32■□□□□ 0.04
CSPG4P12-202ENST00000559989 ZRANB1Q9UGI0 708 aa15.32■□□□□ 0.04
CSPG4P12-202ENST00000559989 IGSF22Q8N9C0 903 aa15.32■□□□□ 0.04
CSPG4P12-202ENST00000559989 CENPKQ9BS16 269 aa15.32■□□□□ 0.04
CSPG4P12-202ENST00000559989 EFHD1Q9BUP0 239 aa15.32■□□□□ 0.04
CSPG4P12-202ENST00000559989 SCOCQ9UIL1 159 aa15.32■□□□□ 0.04
CSPG4P12-202ENST00000559989 PTCD1O75127 700 aaKnown RBP15.32■□□□□ 0.04
CSPG4P12-202ENST00000559989 CABP1Q9NZU7 370 aa15.32■□□□□ 0.04
CSPG4P12-202ENST00000559989 SPDYE16A6NNV3 312 aaPredicted RBP15.31■□□□□ 0.04
CSPG4P12-202ENST00000559989 MAFGO15525 162 aa15.31■□□□□ 0.04
CSPG4P12-202ENST00000559989 ZFXP17010 805 aaPredicted RBP15.31■□□□□ 0.04
CSPG4P12-202ENST00000559989 GNAT2P19087 354 aa15.31■□□□□ 0.04
CSPG4P12-202ENST00000559989 SPDYE2Q495Y8 402 aa15.31■□□□□ 0.04
CSPG4P12-202ENST00000559989 CCDC152Q4G0S7 254 aa15.31■□□□□ 0.04
CSPG4P12-202ENST00000559989 BMP2KLQ5H9B9 411 aa15.31■□□□□ 0.04
CSPG4P12-202ENST00000559989 LDHAL6AQ6ZMR3 332 aa15.31■□□□□ 0.04
CSPG4P12-202ENST00000559989 ANLNQ9NQW6 1124 aa15.31■□□□□ 0.04
CSPG4P12-202ENST00000559989 LMNAP02545 664 aaKnown RBP15.31■□□□□ 0.04
CSPG4P12-202ENST00000559989 RRS1Q15050 365 aaKnown RBP15.31■□□□□ 0.04
CSPG4P12-202ENST00000559989 TTC22Q5TAA0 569 aa15.31■□□□□ 0.04
CSPG4P12-202ENST00000559989 IMPACTQ9P2X3 320 aa15.31■□□□□ 0.04
CSPG4P12-202ENST00000559989 USTQ9Y2C2 406 aa15.31■□□□□ 0.04
CSPG4P12-202ENST00000559989 LPXNO60711 386 aa15.31■□□□□ 0.04
CSPG4P12-202ENST00000559989 MYL5Q02045 173 aa15.31■□□□□ 0.04
CSPG4P12-202ENST00000559989 KRT71Q3SY84 523 aa15.31■□□□□ 0.04
CSPG4P12-202ENST00000559989 HDAC11Q96DB2 347 aa15.31■□□□□ 0.04
CSPG4P12-202ENST00000559989 CHMP6Q96FZ7 201 aa15.31■□□□□ 0.04
CSPG4P12-202ENST00000559989 SART1O43290 800 aaKnown RBP15.31■□□□□ 0.04
CSPG4P12-202ENST00000559989 PLCD1P51178 756 aa15.31■□□□□ 0.04
CSPG4P12-202ENST00000559989 ANKRD35Q8N283 1001 aa15.31■□□□□ 0.04
CSPG4P12-202ENST00000559989 ANKRD42Q8N9B4 389 aa15.31■□□□□ 0.04
CSPG4P12-202ENST00000559989 POMGNT1Q8WZA1 660 aa15.31■□□□□ 0.04
CSPG4P12-202ENST00000559989 MRFAP1L1Q96HT8 127 aa15.31■□□□□ 0.04
CSPG4P12-202ENST00000559989 MAD1L1Q9Y6D9 718 aa15.31■□□□□ 0.04
CSPG4P12-202ENST00000559989 TDRD9Q8NDG6 1382 aaKnown RBP15.31■□□□□ 0.04
CSPG4P12-202ENST00000559989 HP1BP3Q5SSJ5 553 aaPredicted RBP15.3■□□□□ 0.04
CSPG4P12-202ENST00000559989 NECAB1Q8N987 351 aa15.3■□□□□ 0.04
CSPG4P12-202ENST00000559989 GSTA4O15217 222 aa15.3■□□□□ 0.04
CSPG4P12-202ENST00000559989 KRT10P13645 584 aa15.3■□□□□ 0.04
CSPG4P12-202ENST00000559989 CYP7A1P22680 504 aa15.3■□□□□ 0.04
CSPG4P12-202ENST00000559989 TBC1D8BQ0IIM8 1120 aa15.3■□□□□ 0.04
CSPG4P12-202ENST00000559989 MCMDC2Q4G0Z9 681 aa15.3■□□□□ 0.04
CSPG4P12-202ENST00000559989 TXLNGQ9NUQ3 528 aa15.3■□□□□ 0.04
CSPG4P12-202ENST00000559989 MIS18AQ9NYP9 233 aa15.3■□□□□ 0.04
CSPG4P12-202ENST00000559989 VGLL3A8MV65 326 aa15.3■□□□□ 0.04
CSPG4P12-202ENST00000559989 P4HA1P13674 534 aa15.3■□□□□ 0.04
CSPG4P12-202ENST00000559989 NUCB1Q02818 461 aa15.3■□□□□ 0.04
CSPG4P12-202ENST00000559989 KRT81Q14533 505 aa15.3■□□□□ 0.04
CSPG4P12-202ENST00000559989 CWF19L2Q2TBE0 894 aaKnown RBP15.3■□□□□ 0.04
CSPG4P12-202ENST00000559989 TEX13AQ9BXU3 409 aaPredicted RBP15.3■□□□□ 0.04
CSPG4P12-202ENST00000559989 DNM1Q05193 864 aaKnown RBP15.3■□□□□ 0.04
CSPG4P12-202ENST00000559989 AMOTL2Q9Y2J4 779 aa15.3■□□□□ 0.04
CSPG4P12-202ENST00000559989 MAP3K2Q9Y2U5 619 aa15.3■□□□□ 0.04
CSPG4P12-202ENST00000559989 PTPRGP23470 1445 aa15.3■□□□□ 0.04
CSPG4P12-202ENST00000559989 PPP2R5EQ16537 467 aa15.3■□□□□ 0.04
CSPG4P12-202ENST00000559989 RAB44Q7Z6P3 723 aaPredicted RBP15.3■□□□□ 0.04
CSPG4P12-202ENST00000559989 ZC3H15Q8WU90 426 aaKnown RBP15.3■□□□□ 0.04
CSPG4P12-202ENST00000559989 ZNF219Q9P2Y4 722 aaPredicted RBP15.3■□□□□ 0.04
CSPG4P12-202ENST00000559989 DKC1O60832 514 aaKnown RBP eCLIP15.3■□□□□ 0.04
CSPG4P12-202ENST00000559989 LMNB1P20700 586 aa15.3■□□□□ 0.04
CSPG4P12-202ENST00000559989 GRAMD4Q6IC98 578 aa15.3■□□□□ 0.04
CSPG4P12-202ENST00000559989 DBF4Q9UBU7 674 aaPredicted RBP15.3■□□□□ 0.04
CSPG4P12-202ENST00000559989 PCYT1AP49585 367 aa15.29■□□□□ 0.04
CSPG4P12-202ENST00000559989 OGFOD1Q8N543 542 aa15.29■□□□□ 0.04
CSPG4P12-202ENST00000559989 TMCO5AQ8N6Q1 288 aa15.29■□□□□ 0.04
CSPG4P12-202ENST00000559989 MED4Q9NPJ6 270 aa15.29■□□□□ 0.04
CSPG4P12-202ENST00000559989 RIC8AQ9NPQ8 531 aa15.29■□□□□ 0.04
CSPG4P12-202ENST00000559989 CEP104O60308 925 aa15.29■□□□□ 0.04
CSPG4P12-202ENST00000559989 EEF1B2P24534 225 aaKnown RBP15.29■□□□□ 0.04
CSPG4P12-202ENST00000559989 ZSCAN26Q16670 478 aa15.29■□□□□ 0.04
CSPG4P12-202ENST00000559989 ZBTB41Q5SVQ8 909 aa15.29■□□□□ 0.04
CSPG4P12-202ENST00000559989 FBXO41Q8TF61 875 aa15.29■□□□□ 0.04
CSPG4P12-202ENST00000559989 POLE3Q9NRF9 147 aa15.29■□□□□ 0.04
CSPG4P12-202ENST00000559989 CLTAP09496 248 aa15.29■□□□□ 0.04
CSPG4P12-202ENST00000559989 NPR1P16066 1061 aa15.29■□□□□ 0.04
CSPG4P12-202ENST00000559989 YWHAEP62258 255 aaKnown RBP15.29■□□□□ 0.04
CSPG4P12-202ENST00000559989 RPS6KA1Q15418 735 aa15.29■□□□□ 0.04
CSPG4P12-202ENST00000559989 CAMSAP2Q08AD1 1489 aa15.29■□□□□ 0.04
CSPG4P12-202ENST00000559989 FLOT1O75955 427 aa15.29■□□□□ 0.04
CSPG4P12-202ENST00000559989 PPWD1Q96BP3 646 aaKnown RBP15.29■□□□□ 0.04
CSPG4P12-202ENST00000559989 COPG1Q9Y678 874 aaKnown RBP15.29■□□□□ 0.04
CSPG4P12-202ENST00000559989 CCDC169A6NNP5 214 aa15.29■□□□□ 0.04
CSPG4P12-202ENST00000559989 PEX26Q7Z412 305 aa15.29■□□□□ 0.04
CSPG4P12-202ENST00000559989 KLHL7Q8IXQ5 586 aa15.29■□□□□ 0.04
CSPG4P12-202ENST00000559989 NEUROG2Q9H2A3 272 aa15.29■□□□□ 0.04
CSPG4P12-202ENST00000559989 SYNRGQ9UMZ2 1314 aa15.28■□□□□ 0.04
CSPG4P12-202ENST00000559989 MAGEB6P1A0A0J9YX57 407 aa15.28■□□□□ 0.04
CSPG4P12-202ENST00000559989 EFCAB14O75071 495 aa15.28■□□□□ 0.04
CSPG4P12-202ENST00000559989 SND1Q7KZF4 910 aaKnown RBP eCLIP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms