RNA–Protein interactions for RNA: ENST00000558294.1

SHF-203, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS ALT2 TSL 2

Gene SHF, Length 604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-203ENST00000558294 ANKRD13CQ8N6S4 541 aa13.19□□□□□ -0.3
SHF-203ENST00000558294 SPATA5Q8NB90 893 aa13.19□□□□□ -0.3
SHF-203ENST00000558294 PROCA1Q8NCQ7 364 aaPredicted RBP13.19□□□□□ -0.3
SHF-203ENST00000558294 NEUROD6Q96NK8 337 aa13.19□□□□□ -0.3
SHF-203ENST00000558294 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.19□□□□□ -0.3
SHF-203ENST00000558294 PAK6Q9NQU5 681 aaPredicted RBP13.19□□□□□ -0.3
SHF-203ENST00000558294 PNMA3Q9UL41 463 aa13.19□□□□□ -0.3
SHF-203ENST00000558294 NR2E3Q9Y5X4 410 aa13.19□□□□□ -0.3
SHF-203ENST00000558294 CEP290O15078 2479 aa13.18□□□□□ -0.3
SHF-203ENST00000558294 ZBTB7BO15156 539 aaPredicted RBP13.18□□□□□ -0.3
SHF-203ENST00000558294 LDHCP07864 332 aa13.18□□□□□ -0.3
SHF-203ENST00000558294 CAPN2P17655 700 aa13.18□□□□□ -0.3
SHF-203ENST00000558294 ARID4AP29374 1257 aaPredicted RBP13.18□□□□□ -0.3
SHF-203ENST00000558294 GSTO1P78417 241 aa13.18□□□□□ -0.3
SHF-203ENST00000558294 SPP2Q13103 211 aa13.18□□□□□ -0.3
SHF-203ENST00000558294 RRP1BQ14684 758 aaKnown RBP13.18□□□□□ -0.3
SHF-203ENST00000558294 ZNF280CQ8ND82 737 aa13.18□□□□□ -0.3
SHF-203ENST00000558294 COA7Q96BR5 231 aa13.18□□□□□ -0.3
SHF-203ENST00000558294 DEFB118Q96PH6 123 aa13.18□□□□□ -0.3
SHF-203ENST00000558294 TBC1D2Q9BYX2 928 aa13.18□□□□□ -0.3
SHF-203ENST00000558294 RANBP2P49792 3224 aaKnown RBP13.18□□□□□ -0.3
SHF-203ENST00000558294 SIPA1L1O43166 1804 aa13.18□□□□□ -0.3
SHF-203ENST00000558294 TFRCP02786 760 aaKnown RBP13.17□□□□□ -0.3
SHF-203ENST00000558294 CAP2P40123 477 aa13.17□□□□□ -0.3
SHF-203ENST00000558294 MCAMP43121 646 aa13.17□□□□□ -0.3
SHF-203ENST00000558294 GORABQ5T7V8 394 aa13.17□□□□□ -0.3
SHF-203ENST00000558294 CRISPLD2Q9H0B8 497 aa13.17□□□□□ -0.3
SHF-203ENST00000558294 RAI14Q9P0K7 980 aa13.17□□□□□ -0.3
SHF-203ENST00000558294 TRIOBPQ9H2D6 2365 aa13.17□□□□□ -0.3
SHF-203ENST00000558294 MAST2Q6P0Q8 1798 aa13.17□□□□□ -0.3
SHF-203ENST00000558294 DOCK3Q8IZD9 2030 aa13.17□□□□□ -0.3
SHF-203ENST00000558294 PNMA6EA0A0J9YXQ4 647 aa13.16□□□□□ -0.3
SHF-203ENST00000558294 USP17L5A8MUK1 530 aa13.16□□□□□ -0.3
SHF-203ENST00000558294 GNAI2P04899 355 aa13.16□□□□□ -0.3
SHF-203ENST00000558294 TRIM27P14373 513 aa13.16□□□□□ -0.3
SHF-203ENST00000558294 GCLCP48506 637 aaPredicted RBP13.16□□□□□ -0.3
SHF-203ENST00000558294 HMGCS2P54868 508 aa13.16□□□□□ -0.3
SHF-203ENST00000558294 PABPC4Q13310 644 aaKnown RBP eCLIP13.16□□□□□ -0.3
SHF-203ENST00000558294 SH3D19Q5HYK7 790 aa13.16□□□□□ -0.3
SHF-203ENST00000558294 TEX11Q8IYF3 940 aa13.16□□□□□ -0.3
SHF-203ENST00000558294 HERC5Q9UII4 1024 aaKnown RBP13.16□□□□□ -0.3
SHF-203ENST00000558294 TAOK2Q9UL54 1235 aa13.16□□□□□ -0.3
SHF-203ENST00000558294 ALPK3Q96L96 1907 aa13.15□□□□□ -0.3
SHF-203ENST00000558294 EVI5O60447 810 aa13.15□□□□□ -0.3
SHF-203ENST00000558294 SH3RF3Q8TEJ3 882 aaPredicted RBP13.15□□□□□ -0.3
SHF-203ENST00000558294 PAWRQ96IZ0 340 aaKnown RBP13.15□□□□□ -0.3
SHF-203ENST00000558294 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.15□□□□□ -0.3
SHF-203ENST00000558294 ASCC2Q9H1I8 757 aaPredicted RBP13.15□□□□□ -0.3
SHF-203ENST00000558294 GJD2Q9UKL4 321 aa13.15□□□□□ -0.3
SHF-203ENST00000558294 TNNQ9UQP3 1299 aa13.15□□□□□ -0.3
SHF-203ENST00000558294 PLXNB2O15031 1838 aa13.15□□□□□ -0.3
SHF-203ENST00000558294 CDK5RAP2Q96SN8 1893 aa13.14□□□□□ -0.31
SHF-203ENST00000558294 FOCADQ5VW36 1801 aa13.14□□□□□ -0.31
SHF-203ENST00000558294 A0A1W2PPC1 479 aa13.14□□□□□ -0.31
SHF-203ENST00000558294 HMGCRP04035 888 aa13.14□□□□□ -0.31
SHF-203ENST00000558294 UQCRFS1P1P0C7P4 283 aa13.14□□□□□ -0.31
SHF-203ENST00000558294 G3BP1Q13283 466 aaKnown RBP eCLIP13.14□□□□□ -0.31
SHF-203ENST00000558294 WDR18Q9BV38 432 aa13.14□□□□□ -0.31
SHF-203ENST00000558294 AS3MTQ9HBK9 375 aa13.14□□□□□ -0.31
SHF-203ENST00000558294 LRP2BPQ9P2M1 347 aa13.14□□□□□ -0.31
SHF-203ENST00000558294 PI4KBQ9UBF8 816 aa13.14□□□□□ -0.31
SHF-203ENST00000558294 MORF4L1Q9UBU8 362 aa13.14□□□□□ -0.31
SHF-203ENST00000558294 IPO8O15397 1037 aaKnown RBP13.13□□□□□ -0.31
SHF-203ENST00000558294 JAG1P78504 1218 aa13.13□□□□□ -0.31
SHF-203ENST00000558294 HNRNPUQ00839 825 aaKnown RBP eCLIP13.13□□□□□ -0.31
SHF-203ENST00000558294 TRIM32Q13049 653 aa13.13□□□□□ -0.31
SHF-203ENST00000558294 ATF7IPQ6VMQ6 1270 aa13.13□□□□□ -0.31
SHF-203ENST00000558294 ANKLE1Q8NAG6 615 aa13.13□□□□□ -0.31
SHF-203ENST00000558294 DIS3LQ8TF46 1054 aaKnown RBP13.13□□□□□ -0.31
SHF-203ENST00000558294 NOL10Q9BSC4 688 aaKnown RBP13.13□□□□□ -0.31
SHF-203ENST00000558294 DHX36Q9H2U1 1008 aaKnown RBP13.13□□□□□ -0.31
SHF-203ENST00000558294 AATFQ9NY61 560 aaKnown RBP eCLIP13.13□□□□□ -0.31
SHF-203ENST00000558294 BAG3O95817 575 aa13.12□□□□□ -0.31
SHF-203ENST00000558294 ASNSP08243 561 aa13.12□□□□□ -0.31
SHF-203ENST00000558294 HOXA7P31268 230 aaPredicted RBP13.12□□□□□ -0.31
SHF-203ENST00000558294 BACE1P56817 501 aa13.12□□□□□ -0.31
SHF-203ENST00000558294 PPP4CP60510 307 aa13.12□□□□□ -0.31
SHF-203ENST00000558294 MTMR2Q13614 643 aa13.12□□□□□ -0.31
SHF-203ENST00000558294 NAA16Q6N069 864 aaPredicted RBP13.12□□□□□ -0.31
SHF-203ENST00000558294 NECAB2Q7Z6G3 386 aa13.12□□□□□ -0.31
SHF-203ENST00000558294 ADGRA1Q86SQ6 560 aa13.12□□□□□ -0.31
SHF-203ENST00000558294 METTL16Q86W50 562 aaKnown RBP13.12□□□□□ -0.31
SHF-203ENST00000558294 DNAJC18Q9H819 358 aa13.12□□□□□ -0.31
SHF-203ENST00000558294 GPR108Q9NPR9 543 aa13.12□□□□□ -0.31
SHF-203ENST00000558294 SNRKQ9NRH2 765 aa13.12□□□□□ -0.31
SHF-203ENST00000558294 FLT1P17948 1338 aa13.12□□□□□ -0.31
SHF-203ENST00000558294 RPTORQ8N122 1335 aa13.12□□□□□ -0.31
SHF-203ENST00000558294 DDX60LQ5H9U9 1706 aaKnown RBP13.11□□□□□ -0.31
SHF-203ENST00000558294 MYO5AQ9Y4I1 1855 aaKnown RBP13.11□□□□□ -0.31
SHF-203ENST00000558294 SOX1O00570 391 aaPredicted RBP13.11□□□□□ -0.31
SHF-203ENST00000558294 BCAR3O75815 825 aa13.11□□□□□ -0.31
SHF-203ENST00000558294 CYP2E1P05181 493 aaPredicted RBP13.11□□□□□ -0.31
SHF-203ENST00000558294 PLCG2P16885 1265 aa13.11□□□□□ -0.31
SHF-203ENST00000558294 MNX1P50219 401 aaPredicted RBP13.11□□□□□ -0.31
SHF-203ENST00000558294 POLA2Q14181 598 aa13.11□□□□□ -0.31
SHF-203ENST00000558294 SHROOM1Q2M3G4 852 aaPredicted RBP13.11□□□□□ -0.31
SHF-203ENST00000558294 TNNI3KQ59H18 835 aa13.11□□□□□ -0.31
SHF-203ENST00000558294 TTC39AQ5SRH9 613 aa13.11□□□□□ -0.31
SHF-203ENST00000558294 MAPKAPK5Q8IW41 473 aa13.11□□□□□ -0.31
SHF-203ENST00000558294 TGFBRAP1Q8WUH2 860 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms