RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 KRT23Q9C075 422 aa28.05■■■□□ 2.08
SIX4-203ENST00000556952 PGAP2Q9UHJ9 254 aa28.05■■■□□ 2.08
SIX4-203ENST00000556952 NEDD4P46934 1319 aa28.04■■■□□ 2.08
SIX4-203ENST00000556952 MCM5P33992 734 aa28.04■■■□□ 2.08
SIX4-203ENST00000556952 COL9A3Q14050 684 aaPredicted RBP28.04■■■□□ 2.08
SIX4-203ENST00000556952 ZBED3Q96IU2 234 aaPredicted RBP28.04■■■□□ 2.08
SIX4-203ENST00000556952 WNT10BO00744 389 aa28.03■■■□□ 2.08
SIX4-203ENST00000556952 WDHD1O75717 1129 aaPredicted RBP28.03■■■□□ 2.08
SIX4-203ENST00000556952 C12orf60Q5U649 245 aa28.03■■■□□ 2.08
SIX4-203ENST00000556952 ZC3H15Q8WU90 426 aaKnown RBP28.03■■■□□ 2.08
SIX4-203ENST00000556952 FBXL16Q8N461 479 aa28.03■■■□□ 2.08
SIX4-203ENST00000556952 MTMR14Q8NCE2 650 aa28.03■■■□□ 2.08
SIX4-203ENST00000556952 GGA3Q9NZ52 723 aa28.03■■■□□ 2.08
SIX4-203ENST00000556952 LIMCH1Q9UPQ0 1083 aa28.03■■■□□ 2.08
SIX4-203ENST00000556952 FGRP09769 529 aa28.02■■■□□ 2.08
SIX4-203ENST00000556952 NT5C2P49902 561 aa28.02■■■□□ 2.08
SIX4-203ENST00000556952 CYP2D7A0A087X1C5 515 aa28.01■■■□□ 2.07
SIX4-203ENST00000556952 NPM3O75607 178 aaKnown RBP28.01■■■□□ 2.07
SIX4-203ENST00000556952 ITGBL1O95965 494 aaPredicted RBP28.01■■■□□ 2.07
SIX4-203ENST00000556952 DLGAP5Q15398 846 aa28.01■■■□□ 2.07
SIX4-203ENST00000556952 TMX3Q96JJ7 454 aa28.01■■■□□ 2.07
SIX4-203ENST00000556952 TCEANC2Q96MN5 208 aa28.01■■■□□ 2.07
SIX4-203ENST00000556952 IDI2Q9BXS1 227 aa28.01■■■□□ 2.07
SIX4-203ENST00000556952 AGXT2Q9BYV1 514 aa28.01■■■□□ 2.07
SIX4-203ENST00000556952 SPDYE2BA6NHP3 402 aa28■■■□□ 2.07
SIX4-203ENST00000556952 POLR3DP05423 398 aaPredicted RBP28■■■□□ 2.07
SIX4-203ENST00000556952 SPDYE6P0CI01 402 aa28■■■□□ 2.07
SIX4-203ENST00000556952 TOB2Q14106 344 aaPredicted RBP28■■■□□ 2.07
SIX4-203ENST00000556952 ANGEL2Q5VTE6 544 aaKnown RBP28■■■□□ 2.07
SIX4-203ENST00000556952 Q6ZUG5 572 aa28■■■□□ 2.07
SIX4-203ENST00000556952 GLIS2Q9BZE0 524 aaPredicted RBP28■■■□□ 2.07
SIX4-203ENST00000556952 TRPM7Q96QT4 1865 aa28■■■□□ 2.07
SIX4-203ENST00000556952 B4E1Z4 1266 aa27.99■■■□□ 2.07
SIX4-203ENST00000556952 PRC1O43663 620 aa27.99■■■□□ 2.07
SIX4-203ENST00000556952 FGD1P98174 961 aa27.99■■■□□ 2.07
SIX4-203ENST00000556952 FMR1Q06787 632 aaKnown RBP eCLIP27.99■■■□□ 2.07
SIX4-203ENST00000556952 PDE4BQ07343 736 aa27.99■■■□□ 2.07
SIX4-203ENST00000556952 PRMT6Q96LA8 375 aaPredicted RBP27.99■■■□□ 2.07
SIX4-203ENST00000556952 ZSCAN31Q96LW9 406 aaPredicted RBP27.99■■■□□ 2.07
SIX4-203ENST00000556952 TACC3Q9Y6A5 838 aa27.99■■■□□ 2.07
SIX4-203ENST00000556952 CYP2D6P10635 497 aa27.99■■■□□ 2.07
SIX4-203ENST00000556952 PICALMQ13492 652 aa27.99■■■□□ 2.07
SIX4-203ENST00000556952 NOL8Q76FK4 1167 aaKnown RBP27.99■■■□□ 2.07
SIX4-203ENST00000556952 OSBPL5Q9H0X9 879 aaPredicted RBP27.99■■■□□ 2.07
SIX4-203ENST00000556952 DDX4Q9NQI0 724 aaKnown RBP27.99■■■□□ 2.07
SIX4-203ENST00000556952 SAP30BPQ9UHR5 308 aaKnown RBP27.99■■■□□ 2.07
SIX4-203ENST00000556952 SCAF8Q9UPN6 1271 aaKnown RBP27.99■■■□□ 2.07
SIX4-203ENST00000556952 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.99■■■□□ 2.07
SIX4-203ENST00000556952 PASKQ96RG2 1323 aa27.98■■■□□ 2.07
SIX4-203ENST00000556952 TRAF5O00463 557 aa27.98■■■□□ 2.07
SIX4-203ENST00000556952 ORC4O43929 436 aa27.98■■■□□ 2.07
SIX4-203ENST00000556952 DLK2Q6UY11 383 aa27.98■■■□□ 2.07
SIX4-203ENST00000556952 ESR2Q92731 530 aa27.98■■■□□ 2.07
SIX4-203ENST00000556952 MTA3Q9BTC8 594 aa27.98■■■□□ 2.07
SIX4-203ENST00000556952 SH2B1Q9NRF2 756 aaPredicted RBP27.98■■■□□ 2.07
SIX4-203ENST00000556952 COL2A1P02458 1487 aaPredicted RBP27.97■■■□□ 2.07
SIX4-203ENST00000556952 HSP90AA1P07900 732 aaKnown RBP27.97■■■□□ 2.07
SIX4-203ENST00000556952 ANTXR2P58335 489 aa27.97■■■□□ 2.07
SIX4-203ENST00000556952 TMEM87BQ96K49 555 aa27.97■■■□□ 2.07
SIX4-203ENST00000556952 TOMM22Q9NS69 142 aa27.97■■■□□ 2.07
SIX4-203ENST00000556952 MYH8P13535 1937 aa27.96■■■□□ 2.07
SIX4-203ENST00000556952 ADM5C9JUS6 153 aa27.96■■■□□ 2.07
SIX4-203ENST00000556952 KDM4AO75164 1064 aa27.96■■■□□ 2.07
SIX4-203ENST00000556952 CUL4AQ13619 759 aa27.96■■■□□ 2.07
SIX4-203ENST00000556952 TTC6Q86TZ1 520 aa27.96■■■□□ 2.07
SIX4-203ENST00000556952 DCPSQ96C86 337 aaKnown RBP27.96■■■□□ 2.07
SIX4-203ENST00000556952 TDRD3Q9H7E2 651 aaKnown RBP27.96■■■□□ 2.07
SIX4-203ENST00000556952 ZNF287Q9HBT7 754 aa27.96■■■□□ 2.07
SIX4-203ENST00000556952 INCENPQ9NQS7 918 aa27.96■■■□□ 2.07
SIX4-203ENST00000556952 TMOD2Q9NZR1 351 aa27.96■■■□□ 2.07
SIX4-203ENST00000556952 SMIM22K7EJ46 135 aa27.95■■■□□ 2.07
SIX4-203ENST00000556952 NFIAQ12857 509 aa27.95■■■□□ 2.07
SIX4-203ENST00000556952 RRP12Q5JTH9 1297 aaKnown RBP27.95■■■□□ 2.07
SIX4-203ENST00000556952 CYB5R4Q7L1T6 521 aa27.95■■■□□ 2.07
SIX4-203ENST00000556952 CHST3Q7LGC8 479 aa27.95■■■□□ 2.07
SIX4-203ENST00000556952 USP48Q86UV5 1035 aa27.95■■■□□ 2.07
SIX4-203ENST00000556952 LRRC2Q9BYS8 371 aa27.95■■■□□ 2.07
SIX4-203ENST00000556952 PLCD1P51178 756 aa27.94■■■□□ 2.06
SIX4-203ENST00000556952 KRT26Q7Z3Y9 468 aa27.94■■■□□ 2.06
SIX4-203ENST00000556952 STK11IPQ8N1F8 1099 aa27.94■■■□□ 2.06
SIX4-203ENST00000556952 BRF1Q92994 677 aa27.94■■■□□ 2.06
SIX4-203ENST00000556952 ZSWIM5Q9P217 1185 aa27.94■■■□□ 2.06
SIX4-203ENST00000556952 TPCN1Q9ULQ1 816 aa27.94■■■□□ 2.06
SIX4-203ENST00000556952 PITPNM2Q9BZ72 1349 aa27.94■■■□□ 2.06
SIX4-203ENST00000556952 CLRN2A0PK11 232 aa27.94■■■□□ 2.06
SIX4-203ENST00000556952 ENTPD3O75355 529 aa27.94■■■□□ 2.06
SIX4-203ENST00000556952 EVX2Q03828 476 aa27.94■■■□□ 2.06
SIX4-203ENST00000556952 CDC37L1Q7L3B6 337 aa27.94■■■□□ 2.06
SIX4-203ENST00000556952 DHX36Q9H2U1 1008 aaKnown RBP27.94■■■□□ 2.06
SIX4-203ENST00000556952 MYO1BO43795 1136 aa27.93■■■□□ 2.06
SIX4-203ENST00000556952 SART3Q15020 963 aaKnown RBP27.93■■■□□ 2.06
SIX4-203ENST00000556952 SLC4A8Q2Y0W8 1093 aa27.93■■■□□ 2.06
SIX4-203ENST00000556952 SPDYE2Q495Y8 402 aa27.93■■■□□ 2.06
SIX4-203ENST00000556952 C16orf86Q6ZW13 317 aa27.93■■■□□ 2.06
SIX4-203ENST00000556952 INTS4Q96HW7 963 aaKnown RBP27.93■■■□□ 2.06
SIX4-203ENST00000556952 FAM198AQ9UFP1 575 aa27.93■■■□□ 2.06
SIX4-203ENST00000556952 TAOK2Q9UL54 1235 aa27.93■■■□□ 2.06
SIX4-203ENST00000556952 ANGEL1Q9UNK9 670 aaKnown RBP27.93■■■□□ 2.06
SIX4-203ENST00000556952 SIPA1L1O43166 1804 aa27.92■■■□□ 2.06
SIX4-203ENST00000556952 HLA-DOAP06340 250 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms