RNA–Protein interactions for RNA: ENST00000554731.1

RDH11-207, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-207ENST00000554731 IRF5Q13568 498 aa15.37■□□□□ 0.05
RDH11-207ENST00000554731 TREML2Q5T2D2 321 aa15.37■□□□□ 0.05
RDH11-207ENST00000554731 CHRDL2Q6WN34 429 aa15.37■□□□□ 0.05
RDH11-207ENST00000554731 ANKRD13CQ8N6S4 541 aa15.37■□□□□ 0.05
RDH11-207ENST00000554731 COA7Q96BR5 231 aa15.37■□□□□ 0.05
RDH11-207ENST00000554731 TBC1D2Q9BYX2 928 aa15.37■□□□□ 0.05
RDH11-207ENST00000554731 LRP2BPQ9P2M1 347 aa15.37■□□□□ 0.05
RDH11-207ENST00000554731 COL2A1P02458 1487 aaPredicted RBP15.36■□□□□ 0.05
RDH11-207ENST00000554731 SGPL1O95470 568 aa15.36■□□□□ 0.05
RDH11-207ENST00000554731 INHAP05111 366 aa15.36■□□□□ 0.05
RDH11-207ENST00000554731 UQCRFS1P1P0C7P4 283 aa15.36■□□□□ 0.05
RDH11-207ENST00000554731 MCAMP43121 646 aa15.36■□□□□ 0.05
RDH11-207ENST00000554731 SPP2Q13103 211 aa15.36■□□□□ 0.05
RDH11-207ENST00000554731 FAM110CQ1W6H9 321 aa15.36■□□□□ 0.05
RDH11-207ENST00000554731 ATF7IPQ6VMQ6 1270 aa15.36■□□□□ 0.05
RDH11-207ENST00000554731 TEX11Q8IYF3 940 aa15.36■□□□□ 0.05
RDH11-207ENST00000554731 ZNF280CQ8ND82 737 aa15.36■□□□□ 0.05
RDH11-207ENST00000554731 FRAT1Q92837 279 aaPredicted RBP15.36■□□□□ 0.05
RDH11-207ENST00000554731 NOL10Q9BSC4 688 aaKnown RBP15.36■□□□□ 0.05
RDH11-207ENST00000554731 TAOK2Q9UL54 1235 aa15.36■□□□□ 0.05
RDH11-207ENST00000554731 NR2E3Q9Y5X4 410 aa15.36■□□□□ 0.05
RDH11-207ENST00000554731 PHIPQ8WWQ0 1821 aa15.36■□□□□ 0.05
RDH11-207ENST00000554731 PNMA6EA0A0J9YXQ4 647 aa15.35■□□□□ 0.05
RDH11-207ENST00000554731 CCER2I3L3R5 266 aa15.35■□□□□ 0.05
RDH11-207ENST00000554731 CAPN2P17655 700 aa15.35■□□□□ 0.05
RDH11-207ENST00000554731 CAP2P40123 477 aa15.35■□□□□ 0.05
RDH11-207ENST00000554731 GCLCP48506 637 aaPredicted RBP15.35■□□□□ 0.05
RDH11-207ENST00000554731 PABPC4Q13310 644 aaKnown RBP eCLIP15.35■□□□□ 0.05
RDH11-207ENST00000554731 HERC5Q9UII4 1024 aaKnown RBP15.35■□□□□ 0.05
RDH11-207ENST00000554731 USP17L5A8MUK1 530 aa15.34■□□□□ 0.05
RDH11-207ENST00000554731 TFRCP02786 760 aaKnown RBP15.34■□□□□ 0.05
RDH11-207ENST00000554731 HMGCS2P54868 508 aa15.34■□□□□ 0.05
RDH11-207ENST00000554731 CLUAP1Q96AJ1 413 aa15.34■□□□□ 0.05
RDH11-207ENST00000554731 TNNQ9UQP3 1299 aa15.34■□□□□ 0.05
RDH11-207ENST00000554731 BCAR3O75815 825 aa15.33■□□□□ 0.04
RDH11-207ENST00000554731 BAG3O95817 575 aa15.33■□□□□ 0.04
RDH11-207ENST00000554731 PLCG2P16885 1265 aa15.33■□□□□ 0.04
RDH11-207ENST00000554731 NAA16Q6N069 864 aaPredicted RBP15.33■□□□□ 0.04
RDH11-207ENST00000554731 SH3RF3Q8TEJ3 882 aaPredicted RBP15.33■□□□□ 0.04
RDH11-207ENST00000554731 DEFB118Q96PH6 123 aa15.33■□□□□ 0.04
RDH11-207ENST00000554731 DHX36Q9H2U1 1008 aaKnown RBP15.33■□□□□ 0.04
RDH11-207ENST00000554731 AS3MTQ9HBK9 375 aa15.33■□□□□ 0.04
RDH11-207ENST00000554731 RBM27Q9P2N5 1060 aaKnown RBP15.33■□□□□ 0.04
RDH11-207ENST00000554731 PI4KBQ9UBF8 816 aa15.33■□□□□ 0.04
RDH11-207ENST00000554731 OS9Q13438 667 aaPredicted RBP15.32■□□□□ 0.04
RDH11-207ENST00000554731 RRP1BQ14684 758 aaKnown RBP15.32■□□□□ 0.04
RDH11-207ENST00000554731 SH3D19Q5HYK7 790 aa15.32■□□□□ 0.04
RDH11-207ENST00000554731 CCDC158Q5M9N0 1113 aa15.32■□□□□ 0.04
RDH11-207ENST00000554731 TTC39AQ5SRH9 613 aa15.32■□□□□ 0.04
RDH11-207ENST00000554731 ASCC2Q9H1I8 757 aaPredicted RBP15.32■□□□□ 0.04
RDH11-207ENST00000554731 GPR108Q9NPR9 543 aa15.32■□□□□ 0.04
RDH11-207ENST00000554731 PAK6Q9NQU5 681 aaPredicted RBP15.32■□□□□ 0.04
RDH11-207ENST00000554731 SNRKQ9NRH2 765 aa15.32■□□□□ 0.04
RDH11-207ENST00000554731 AATFQ9NY61 560 aaKnown RBP eCLIP15.32■□□□□ 0.04
RDH11-207ENST00000554731 DOCK3Q8IZD9 2030 aa15.32■□□□□ 0.04
RDH11-207ENST00000554731 ZBTB7BO15156 539 aaPredicted RBP15.31■□□□□ 0.04
RDH11-207ENST00000554731 TNNI3KQ59H18 835 aa15.31■□□□□ 0.04
RDH11-207ENST00000554731 FPGT-TNNI3KV9GXZ4 949 aa15.31■□□□□ 0.04
RDH11-207ENST00000554731 LOC285556D6RIA3 1793 aa15.3■□□□□ 0.04
RDH11-207ENST00000554731 EVI5O60447 810 aa15.3■□□□□ 0.04
RDH11-207ENST00000554731 HMGCRP04035 888 aa15.3■□□□□ 0.04
RDH11-207ENST00000554731 ASNSP08243 561 aa15.3■□□□□ 0.04
RDH11-207ENST00000554731 PPP4CP60510 307 aa15.3■□□□□ 0.04
RDH11-207ENST00000554731 IRX3P78415 501 aaPredicted RBP15.3■□□□□ 0.04
RDH11-207ENST00000554731 MTMR2Q13614 643 aa15.3■□□□□ 0.04
RDH11-207ENST00000554731 POLA2Q14181 598 aa15.3■□□□□ 0.04
RDH11-207ENST00000554731 TMEM57Q8N5G2 664 aa15.3■□□□□ 0.04
RDH11-207ENST00000554731 TGFBRAP1Q8WUH2 860 aa15.3■□□□□ 0.04
RDH11-207ENST00000554731 DBNDD2Q9BQY9 259 aa15.3■□□□□ 0.04
RDH11-207ENST00000554731 WDR18Q9BV38 432 aa15.3■□□□□ 0.04
RDH11-207ENST00000554731 TRIM34Q9BYJ4 488 aa15.3■□□□□ 0.04
RDH11-207ENST00000554731 CRISPLD2Q9H0B8 497 aa15.3■□□□□ 0.04
RDH11-207ENST00000554731 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.3■□□□□ 0.04
RDH11-207ENST00000554731 TMOD4Q9NZQ9 345 aa15.3■□□□□ 0.04
RDH11-207ENST00000554731 BACE1P56817 501 aa15.29■□□□□ 0.04
RDH11-207ENST00000554731 ZKSCAN2Q63HK3 967 aa15.29■□□□□ 0.04
RDH11-207ENST00000554731 FOXP4Q8IVH2 680 aaPredicted RBP15.29■□□□□ 0.04
RDH11-207ENST00000554731 MAPKAPK5Q8IW41 473 aa15.29■□□□□ 0.04
RDH11-207ENST00000554731 CRACR2BQ8N4Y2 399 aaPredicted RBP15.29■□□□□ 0.04
RDH11-207ENST00000554731 SSH3Q8TE77 659 aa15.29■□□□□ 0.04
RDH11-207ENST00000554731 PRO3102Q9H379 93 aa15.29■□□□□ 0.04
RDH11-207ENST00000554731 MORF4L1Q9UBU8 362 aa15.29■□□□□ 0.04
RDH11-207ENST00000554731 GJD2Q9UKL4 321 aa15.29■□□□□ 0.04
RDH11-207ENST00000554731 ATAD5Q96QE3 1844 aa15.29■□□□□ 0.04
RDH11-207ENST00000554731 FLT1P17948 1338 aa15.28■□□□□ 0.04
RDH11-207ENST00000554731 C19orf81C9J6K1 198 aa15.28■□□□□ 0.04
RDH11-207ENST00000554731 IGSF3O75054 1194 aa15.28■□□□□ 0.04
RDH11-207ENST00000554731 SURF6O75683 361 aaKnown RBP15.28■□□□□ 0.04
RDH11-207ENST00000554731 CYP2E1P05181 493 aaPredicted RBP15.28■□□□□ 0.04
RDH11-207ENST00000554731 HOXA7P31268 230 aaPredicted RBP15.28■□□□□ 0.04
RDH11-207ENST00000554731 ATP8B2P98198 1209 aa15.28■□□□□ 0.04
RDH11-207ENST00000554731 NECAB2Q7Z6G3 386 aa15.28■□□□□ 0.04
RDH11-207ENST00000554731 METTL16Q86W50 562 aaKnown RBP15.28■□□□□ 0.04
RDH11-207ENST00000554731 PAWRQ96IZ0 340 aaKnown RBP15.28■□□□□ 0.04
RDH11-207ENST00000554731 ZNF512BQ96KM6 892 aaPredicted RBP15.28■□□□□ 0.04
RDH11-207ENST00000554731 GINM1Q9NU53 330 aa15.28■□□□□ 0.04
RDH11-207ENST00000554731 RPTORQ8N122 1335 aa15.27■□□□□ 0.04
RDH11-207ENST00000554731 ADGRA1Q86SQ6 560 aa15.27■□□□□ 0.04
RDH11-207ENST00000554731 ANKLE1Q8NAG6 615 aa15.27■□□□□ 0.04
RDH11-207ENST00000554731 P2RX7Q99572 595 aaKnown RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms