RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 HTTP42858 3142 aa9.07□□□□□ -0.96
ATXN3-224ENST00000554040 CDC14CA4D256 554 aa9.07□□□□□ -0.96
ATXN3-224ENST00000554040 ECE2O60344 883 aa9.07□□□□□ -0.96
ATXN3-224ENST00000554040 NR1H3Q13133 447 aa9.07□□□□□ -0.96
ATXN3-224ENST00000554040 ANGEL2Q5VTE6 544 aaKnown RBP9.07□□□□□ -0.96
ATXN3-224ENST00000554040 SV2AQ7L0J3 742 aa9.07□□□□□ -0.96
ATXN3-224ENST00000554040 BANK1Q8NDB2 785 aa9.07□□□□□ -0.96
ATXN3-224ENST00000554040 POLLQ9UGP5 575 aa9.07□□□□□ -0.96
ATXN3-224ENST00000554040 NSFL1CQ9UNZ2 370 aaKnown RBP9.07□□□□□ -0.96
ATXN3-224ENST00000554040 RTL9Q8NET4 1388 aa9.07□□□□□ -0.96
ATXN3-224ENST00000554040 ATP5J2-PTCD1G3V325 749 aa9.06□□□□□ -0.96
ATXN3-224ENST00000554040 EN2P19622 333 aaPredicted RBP9.06□□□□□ -0.96
ATXN3-224ENST00000554040 SCTRP47872 440 aa9.06□□□□□ -0.96
ATXN3-224ENST00000554040 ZNF280AP59817 542 aaPredicted RBP9.06□□□□□ -0.96
ATXN3-224ENST00000554040 EIF4A1P60842 406 aaKnown RBP9.06□□□□□ -0.96
ATXN3-224ENST00000554040 SREBF2Q12772 1141 aa9.06□□□□□ -0.96
ATXN3-224ENST00000554040 KCNMA1Q12791 1236 aa9.06□□□□□ -0.96
ATXN3-224ENST00000554040 OTOP1Q7RTM1 612 aa9.06□□□□□ -0.96
ATXN3-224ENST00000554040 PNISRQ8TF01 805 aaKnown RBP9.06□□□□□ -0.96
ATXN3-224ENST00000554040 EYA3Q99504 573 aa9.06□□□□□ -0.96
ATXN3-224ENST00000554040 SNRKQ9NRH2 765 aa9.06□□□□□ -0.96
ATXN3-224ENST00000554040 TRIM17Q9Y577 477 aa9.06□□□□□ -0.96
ATXN3-224ENST00000554040 RANBP2P49792 3224 aaKnown RBP9.06□□□□□ -0.96
ATXN3-224ENST00000554040 COL3A1P02461 1466 aaPredicted RBP9.05□□□□□ -0.96
ATXN3-224ENST00000554040 RHOQP17081 205 aa9.05□□□□□ -0.96
ATXN3-224ENST00000554040 GPSM2P81274 684 aa9.05□□□□□ -0.96
ATXN3-224ENST00000554040 GAS6Q14393 721 aa9.05□□□□□ -0.96
ATXN3-224ENST00000554040 PRICKLE2Q7Z3G6 844 aa9.05□□□□□ -0.96
ATXN3-224ENST00000554040 LRP10Q7Z4F1 713 aa9.05□□□□□ -0.96
ATXN3-224ENST00000554040 NLRP10Q86W26 655 aa9.05□□□□□ -0.96
ATXN3-224ENST00000554040 AGBL3Q8NEM8 1001 aa9.05□□□□□ -0.96
ATXN3-224ENST00000554040 ADAMTS8Q9UP79 889 aa9.05□□□□□ -0.96
ATXN3-224ENST00000554040 PITPNM2Q9BZ72 1349 aa9.05□□□□□ -0.96
ATXN3-224ENST00000554040 A0A1W2PRU2 124 aa9.04□□□□□ -0.96
ATXN3-224ENST00000554040 ARHGEF15O94989 841 aa9.04□□□□□ -0.96
ATXN3-224ENST00000554040 U2AF1L5P0DN76 240 aaPredicted RBP9.04□□□□□ -0.96
ATXN3-224ENST00000554040 U2AF1Q01081 240 aaKnown RBP eCLIP9.04□□□□□ -0.96
ATXN3-224ENST00000554040 HSP90AB3PQ58FF7 597 aa9.04□□□□□ -0.96
ATXN3-224ENST00000554040 PRAMEF18Q5VWM3 479 aa9.04□□□□□ -0.96
ATXN3-224ENST00000554040 SLC17A8Q8NDX2 589 aa9.04□□□□□ -0.96
ATXN3-224ENST00000554040 TBC1D16Q8TBP0 767 aa9.04□□□□□ -0.96
ATXN3-224ENST00000554040 ARMC5Q96C12 935 aa9.04□□□□□ -0.96
ATXN3-224ENST00000554040 ZC3H12CQ9C0D7 883 aaKnown RBP9.04□□□□□ -0.96
ATXN3-224ENST00000554040 TRMT112Q9UI30 125 aaKnown RBP9.04□□□□□ -0.96
ATXN3-224ENST00000554040 NUDCQ9Y266 331 aa9.04□□□□□ -0.96
ATXN3-224ENST00000554040 SH3TC1Q8TE82 1336 aa9.04□□□□□ -0.96
ATXN3-224ENST00000554040 TRAK2O60296 914 aa9.03□□□□□ -0.96
ATXN3-224ENST00000554040 CELF1Q92879 486 aaKnown RBP9.03□□□□□ -0.96
ATXN3-224ENST00000554040 GMLQ99445 158 aa9.03□□□□□ -0.96
ATXN3-224ENST00000554040 THUMPD2Q9BTF0 503 aaKnown RBP9.03□□□□□ -0.96
ATXN3-224ENST00000554040 MYOZ2Q9NPC6 264 aa9.03□□□□□ -0.96
ATXN3-224ENST00000554040 SCAF8Q9UPN6 1271 aaKnown RBP9.03□□□□□ -0.96
ATXN3-224ENST00000554040 PTPN22Q9Y2R2 807 aa9.03□□□□□ -0.96
ATXN3-224ENST00000554040 NUP98P52948 1817 aa9.03□□□□□ -0.96
ATXN3-224ENST00000554040 GPC1P35052 558 aa9.02□□□□□ -0.97
ATXN3-224ENST00000554040 NF2P35240 595 aa9.02□□□□□ -0.97
ATXN3-224ENST00000554040 INHBEP58166 350 aa9.02□□□□□ -0.97
ATXN3-224ENST00000554040 PTPN12Q05209 780 aaKnown RBP9.02□□□□□ -0.97
ATXN3-224ENST00000554040 TCIRG1Q13488 830 aa9.02□□□□□ -0.97
ATXN3-224ENST00000554040 CNGB1Q14028 1251 aaPredicted RBP9.02□□□□□ -0.97
ATXN3-224ENST00000554040 SF3B3Q15393 1217 aaKnown RBP9.02□□□□□ -0.97
ATXN3-224ENST00000554040 CFAP53Q96M91 514 aa9.02□□□□□ -0.97
ATXN3-224ENST00000554040 OSBPL3Q9H4L5 887 aa9.02□□□□□ -0.97
ATXN3-224ENST00000554040 NDUFB9Q9Y6M9 179 aa9.02□□□□□ -0.97
ATXN3-224ENST00000554040 DUOX1Q9NRD9 1551 aa9.02□□□□□ -0.97
ATXN3-224ENST00000554040 COL6A3P12111 3177 aa9.01□□□□□ -0.97
ATXN3-224ENST00000554040 H0YGN5 161 aa9.01□□□□□ -0.97
ATXN3-224ENST00000554040 MEN1O00255 615 aa9.01□□□□□ -0.97
ATXN3-224ENST00000554040 EIF2S2P20042 333 aaKnown RBP9.01□□□□□ -0.97
ATXN3-224ENST00000554040 RPS8P62241 208 aaKnown RBP9.01□□□□□ -0.97
ATXN3-224ENST00000554040 LDLRAD1Q5T700 205 aa9.01□□□□□ -0.97
ATXN3-224ENST00000554040 ARMC9Q7Z3E5 817 aa9.01□□□□□ -0.97
ATXN3-224ENST00000554040 ZNF837Q96EG3 531 aaPredicted RBP9.01□□□□□ -0.97
ATXN3-224ENST00000554040 ERO1AQ96HE7 468 aa9.01□□□□□ -0.97
ATXN3-224ENST00000554040 GRIP2Q9C0E4 1043 aa9.01□□□□□ -0.97
ATXN3-224ENST00000554040 EFCC1Q9HA90 598 aa9.01□□□□□ -0.97
ATXN3-224ENST00000554040 PODXL2Q9NZ53 605 aa9.01□□□□□ -0.97
ATXN3-224ENST00000554040 PAPPA2Q9BXP8 1791 aa9□□□□□ -0.97
ATXN3-224ENST00000554040 MANSC4A6NHS7 340 aaPredicted RBP9□□□□□ -0.97
ATXN3-224ENST00000554040 ANXA1P04083 346 aa9□□□□□ -0.97
ATXN3-224ENST00000554040 MCCD1P59942 119 aaPredicted RBP9□□□□□ -0.97
ATXN3-224ENST00000554040 PROSER3Q2NL68 480 aa9□□□□□ -0.97
ATXN3-224ENST00000554040 NBPF9Q3BBW0 867 aa9□□□□□ -0.97
ATXN3-224ENST00000554040 RNF20Q5VTR2 975 aa9□□□□□ -0.97
ATXN3-224ENST00000554040 COPS6Q7L5N1 327 aa9□□□□□ -0.97
ATXN3-224ENST00000554040 CD99L2Q8TCZ2 262 aa9□□□□□ -0.97
ATXN3-224ENST00000554040 PCDHB11Q9Y5F2 797 aa9□□□□□ -0.97
ATXN3-224ENST00000554040 LAMA3Q16787 3333 aa9□□□□□ -0.97
ATXN3-224ENST00000554040 ZNF609O15014 1411 aa8.99□□□□□ -0.97
ATXN3-224ENST00000554040 UFL1O94874 794 aa8.99□□□□□ -0.97
ATXN3-224ENST00000554040 AIMP1Q12904 312 aaKnown RBP8.99□□□□□ -0.97
ATXN3-224ENST00000554040 CLN3Q13286 438 aa8.99□□□□□ -0.97
ATXN3-224ENST00000554040 PRKG1Q13976 671 aa8.99□□□□□ -0.97
ATXN3-224ENST00000554040 DBN1Q16643 649 aa8.99□□□□□ -0.97
ATXN3-224ENST00000554040 TPRNQ4KMQ1 711 aa8.99□□□□□ -0.97
ATXN3-224ENST00000554040 SVOPQ8N4V2 548 aa8.99□□□□□ -0.97
ATXN3-224ENST00000554040 XAGE3Q8WTP9 111 aa8.99□□□□□ -0.97
ATXN3-224ENST00000554040 FAM89AQ96GI7 184 aa8.99□□□□□ -0.97
ATXN3-224ENST00000554040 ZNF333Q96JL9 665 aa8.99□□□□□ -0.97
ATXN3-224ENST00000554040 GGA1Q9UJY5 639 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms