RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 RIMBP2O15034 1052 aa18.03■□□□□ 0.48
SCN8A-206ENST00000550891 RCAN1P53805 252 aa18.03■□□□□ 0.48
SCN8A-206ENST00000550891 PPP2R5BQ15173 497 aa18.03■□□□□ 0.48
SCN8A-206ENST00000550891 CCDC73Q6ZRK6 1079 aa18.03■□□□□ 0.48
SCN8A-206ENST00000550891 MPNDQ8N594 471 aa18.03■□□□□ 0.48
SCN8A-206ENST00000550891 ZNF622Q969S3 477 aaKnown RBP eCLIP18.03■□□□□ 0.48
SCN8A-206ENST00000550891 TNMDQ9H2S6 317 aa18.03■□□□□ 0.48
SCN8A-206ENST00000550891 DACT1Q9NYF0 836 aa18.03■□□□□ 0.48
SCN8A-206ENST00000550891 CHD4Q14839 1912 aa18.03■□□□□ 0.48
SCN8A-206ENST00000550891 IFNAR1P17181 557 aa18.03■□□□□ 0.48
SCN8A-206ENST00000550891 SLC4A8Q2Y0W8 1093 aa18.03■□□□□ 0.48
SCN8A-206ENST00000550891 FANCBQ8NB91 859 aa18.03■□□□□ 0.48
SCN8A-206ENST00000550891 SRGNP10124 158 aa18.02■□□□□ 0.48
SCN8A-206ENST00000550891 IL1R1P14778 569 aa18.02■□□□□ 0.48
SCN8A-206ENST00000550891 PLCG2P16885 1265 aa18.02■□□□□ 0.47
SCN8A-206ENST00000550891 LIG1P18858 919 aa18.02■□□□□ 0.47
SCN8A-206ENST00000550891 MAP3K11Q16584 847 aa18.02■□□□□ 0.47
SCN8A-206ENST00000550891 SBK1Q52WX2 424 aa18.02■□□□□ 0.47
SCN8A-206ENST00000550891 KRT40Q6A162 431 aa18.02■□□□□ 0.47
SCN8A-206ENST00000550891 DPP8Q6V1X1 898 aaPredicted RBP18.02■□□□□ 0.47
SCN8A-206ENST00000550891 RCOR1Q9UKL0 485 aa18.02■□□□□ 0.47
SCN8A-206ENST00000550891 RGS22Q8NE09 1264 aa18.01■□□□□ 0.47
SCN8A-206ENST00000550891 MKNK2Q9HBH9 465 aa18.01■□□□□ 0.47
SCN8A-206ENST00000550891 GJB4Q9NTQ9 266 aa18.01■□□□□ 0.47
SCN8A-206ENST00000550891 MROH7-TTC4A0A0A0MT08 1334 aa18.01■□□□□ 0.47
SCN8A-206ENST00000550891 STK36Q9NRP7 1315 aa18.01■□□□□ 0.47
SCN8A-206ENST00000550891 FMNL1O95466 1100 aaPredicted RBP18.01■□□□□ 0.47
SCN8A-206ENST00000550891 CALM1P0DP23 149 aa18.01■□□□□ 0.47
SCN8A-206ENST00000550891 CALM2P0DP24 149 aa18.01■□□□□ 0.47
SCN8A-206ENST00000550891 CALM3P0DP25 149 aa18.01■□□□□ 0.47
SCN8A-206ENST00000550891 SH3RF3Q8TEJ3 882 aaPredicted RBP18.01■□□□□ 0.47
SCN8A-206ENST00000550891 MASTLQ96GX5 879 aa18.01■□□□□ 0.47
SCN8A-206ENST00000550891 AIFM3Q96NN9 605 aa18.01■□□□□ 0.47
SCN8A-206ENST00000550891 ORC4O43929 436 aa18.01■□□□□ 0.47
SCN8A-206ENST00000550891 CCDC192P0DO97 292 aa18.01■□□□□ 0.47
SCN8A-206ENST00000550891 CAMK4Q16566 473 aa18.01■□□□□ 0.47
SCN8A-206ENST00000550891 ENAHQ8N8S7 591 aaPredicted RBP18.01■□□□□ 0.47
SCN8A-206ENST00000550891 TGFBRAP1Q8WUH2 860 aa18.01■□□□□ 0.47
SCN8A-206ENST00000550891 FTOQ9C0B1 505 aaKnown RBP eCLIP18.01■□□□□ 0.47
SCN8A-206ENST00000550891 CCDC88AQ3V6T2 1871 aa18■□□□□ 0.47
SCN8A-206ENST00000550891 SMIM22K7EJ46 135 aa18■□□□□ 0.47
SCN8A-206ENST00000550891 USP17L8P0C7I0 530 aa18■□□□□ 0.47
SCN8A-206ENST00000550891 XBP1P17861 261 aa18■□□□□ 0.47
SCN8A-206ENST00000550891 KIF23Q02241 960 aaPredicted RBP18■□□□□ 0.47
SCN8A-206ENST00000550891 NTRK3Q16288 839 aa18■□□□□ 0.47
SCN8A-206ENST00000550891 MYSM1Q5VVJ2 828 aa18■□□□□ 0.47
SCN8A-206ENST00000550891 KLHL34Q8N239 644 aa18■□□□□ 0.47
SCN8A-206ENST00000550891 COA1Q9GZY4 146 aa18■□□□□ 0.47
SCN8A-206ENST00000550891 ZNF287Q9HBT7 754 aa18■□□□□ 0.47
SCN8A-206ENST00000550891 CYP2D6P10635 497 aa18■□□□□ 0.47
SCN8A-206ENST00000550891 BTDP43251 543 aa18■□□□□ 0.47
SCN8A-206ENST00000550891 GTF2IP78347 998 aa18■□□□□ 0.47
SCN8A-206ENST00000550891 KCNG4Q8TDN1 519 aa18■□□□□ 0.47
SCN8A-206ENST00000550891 PGBD1Q96JS3 809 aa18■□□□□ 0.47
SCN8A-206ENST00000550891 DEXIO95424 95 aa17.99■□□□□ 0.47
SCN8A-206ENST00000550891 FAM217BQ9NTX9 383 aaPredicted RBP17.99■□□□□ 0.47
SCN8A-206ENST00000550891 PPP4CP60510 307 aa17.99■□□□□ 0.47
SCN8A-206ENST00000550891 SEC23AQ15436 765 aa17.99■□□□□ 0.47
SCN8A-206ENST00000550891 CCAR1Q8IX12 1150 aaKnown RBP17.99■□□□□ 0.47
SCN8A-206ENST00000550891 TEX11Q8IYF3 940 aa17.99■□□□□ 0.47
SCN8A-206ENST00000550891 CTCFLQ8NI51 663 aaPredicted RBP17.99■□□□□ 0.47
SCN8A-206ENST00000550891 RTEL1Q9NZ71 1219 aa17.99■□□□□ 0.47
SCN8A-206ENST00000550891 FAM47AQ5JRC9 791 aa17.99■□□□□ 0.47
SCN8A-206ENST00000550891 RBM28Q9NW13 759 aaKnown RBP17.99■□□□□ 0.47
SCN8A-206ENST00000550891 STK32BQ9NY57 414 aa17.99■□□□□ 0.47
SCN8A-206ENST00000550891 BAZ2AQ9UIF9 1905 aaKnown RBP17.99■□□□□ 0.47
SCN8A-206ENST00000550891 EYA3Q99504 573 aa17.98■□□□□ 0.47
SCN8A-206ENST00000550891 H0YIN7 160 aa17.98■□□□□ 0.47
SCN8A-206ENST00000550891 KINO60870 393 aaKnown RBP17.98■□□□□ 0.47
SCN8A-206ENST00000550891 FGRP09769 529 aa17.98■□□□□ 0.47
SCN8A-206ENST00000550891 NT5C2P49902 561 aa17.98■□□□□ 0.47
SCN8A-206ENST00000550891 GRIK5Q16478 980 aa17.98■□□□□ 0.47
SCN8A-206ENST00000550891 MAPKAPK5Q8IW41 473 aa17.98■□□□□ 0.47
SCN8A-206ENST00000550891 ZNF444Q8N0Y2 327 aaPredicted RBP17.98■□□□□ 0.47
SCN8A-206ENST00000550891 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.98■□□□□ 0.47
SCN8A-206ENST00000550891 MAST2Q6P0Q8 1798 aa17.98■□□□□ 0.47
SCN8A-206ENST00000550891 YEATS4O95619 227 aa17.97■□□□□ 0.47
SCN8A-206ENST00000550891 C12orf60Q5U649 245 aa17.97■□□□□ 0.47
SCN8A-206ENST00000550891 C2CD5Q86YS7 1000 aa17.97■□□□□ 0.47
SCN8A-206ENST00000550891 CRACR2BQ8N4Y2 399 aaPredicted RBP17.97■□□□□ 0.47
SCN8A-206ENST00000550891 ILDR1Q86SU0 546 aaPredicted RBP17.97■□□□□ 0.47
SCN8A-206ENST00000550891 CMTR1Q8N1G2 835 aaKnown RBP17.97■□□□□ 0.47
SCN8A-206ENST00000550891 POLR3EQ9NVU0 708 aa17.97■□□□□ 0.47
SCN8A-206ENST00000550891 NID2Q14112 1375 aa17.97■□□□□ 0.47
SCN8A-206ENST00000550891 NR1I2O75469 434 aa17.97■□□□□ 0.47
SCN8A-206ENST00000550891 DDAH1O94760 285 aa17.97■□□□□ 0.47
SCN8A-206ENST00000550891 SPTLC2O15270 562 aa17.96■□□□□ 0.47
SCN8A-206ENST00000550891 ANO1Q5XXA6 986 aa17.96■□□□□ 0.47
SCN8A-206ENST00000550891 SASS6Q6UVJ0 657 aa17.96■□□□□ 0.47
SCN8A-206ENST00000550891 JMYQ8N9B5 988 aa17.96■□□□□ 0.47
SCN8A-206ENST00000550891 FSIP1Q8NA03 581 aa17.96■□□□□ 0.47
SCN8A-206ENST00000550891 RTFDC1Q9BY42 306 aaPredicted RBP17.96■□□□□ 0.47
SCN8A-206ENST00000550891 KAT14Q9H8E8 782 aa17.96■□□□□ 0.47
SCN8A-206ENST00000550891 SAP30BPQ9UHR5 308 aaKnown RBP17.96■□□□□ 0.47
SCN8A-206ENST00000550891 TFAP4Q01664 338 aa17.96■□□□□ 0.47
SCN8A-206ENST00000550891 SF3B2Q13435 895 aaKnown RBP17.96■□□□□ 0.47
SCN8A-206ENST00000550891 CKAP2LQ8IYA6 745 aa17.96■□□□□ 0.47
SCN8A-206ENST00000550891 CLSTN2Q9H4D0 955 aa17.96■□□□□ 0.47
SCN8A-206ENST00000550891 DUOX1Q9NRD9 1551 aa17.96■□□□□ 0.47
SCN8A-206ENST00000550891 KIF28PB7ZC32 967 aa17.96■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms