RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 BAG3O95817 575 aa10.31□□□□□ -0.76
TMEM116-209ENST00000550020 FGRP09769 529 aa10.31□□□□□ -0.76
TMEM116-209ENST00000550020 PFKFB1P16118 471 aa10.31□□□□□ -0.76
TMEM116-209ENST00000550020 NDUFA8P51970 172 aa10.31□□□□□ -0.76
TMEM116-209ENST00000550020 GSDMDP57764 484 aa10.31□□□□□ -0.76
TMEM116-209ENST00000550020 NLRP12P59046 1061 aa10.31□□□□□ -0.76
TMEM116-209ENST00000550020 IQCB1Q15051 598 aa10.31□□□□□ -0.76
TMEM116-209ENST00000550020 SBK1Q52WX2 424 aa10.31□□□□□ -0.76
TMEM116-209ENST00000550020 IFIT1BQ5T764 474 aaKnown RBP10.31□□□□□ -0.76
TMEM116-209ENST00000550020 OTUD7BQ6GQQ9 843 aa10.31□□□□□ -0.76
TMEM116-209ENST00000550020 ZNF804AQ7Z570 1209 aa10.31□□□□□ -0.76
TMEM116-209ENST00000550020 MTERF4Q7Z6M4 381 aaKnown RBP10.31□□□□□ -0.76
TMEM116-209ENST00000550020 DZIP1Q86YF9 867 aaKnown RBP10.31□□□□□ -0.76
TMEM116-209ENST00000550020 RAB11FIP4Q86YS3 637 aa10.31□□□□□ -0.76
TMEM116-209ENST00000550020 KRI1Q8N9T8 703 aaKnown RBP10.31□□□□□ -0.76
TMEM116-209ENST00000550020 ZNF579Q8NAF0 562 aaKnown RBP10.31□□□□□ -0.76
TMEM116-209ENST00000550020 PHKBQ93100 1093 aa10.31□□□□□ -0.76
TMEM116-209ENST00000550020 FTOQ9C0B1 505 aaKnown RBP eCLIP10.31□□□□□ -0.76
TMEM116-209ENST00000550020 ZNF287Q9HBT7 754 aa10.31□□□□□ -0.76
TMEM116-209ENST00000550020 IMPACTQ9P2X3 320 aa10.31□□□□□ -0.76
TMEM116-209ENST00000550020 CLIP2Q9UDT6 1046 aa10.31□□□□□ -0.76
TMEM116-209ENST00000550020 DACH1Q9UI36 760 aa10.31□□□□□ -0.76
TMEM116-209ENST00000550020 NHSQ6T4R5 1651 aa10.31□□□□□ -0.76
TMEM116-209ENST00000550020 TNKSO95271 1327 aa10.31□□□□□ -0.76
TMEM116-209ENST00000550020 A0A1B0GVL5 298 aa10.3□□□□□ -0.76
TMEM116-209ENST00000550020 KIF28PB7ZC32 967 aa10.3□□□□□ -0.76
TMEM116-209ENST00000550020 IKBKBO14920 756 aa10.3□□□□□ -0.76
TMEM116-209ENST00000550020 PRPF3O43395 683 aaKnown RBP10.3□□□□□ -0.76
TMEM116-209ENST00000550020 RANBP6O60518 1105 aaKnown RBP10.3□□□□□ -0.76
TMEM116-209ENST00000550020 KIF5BP33176 963 aa10.3□□□□□ -0.76
TMEM116-209ENST00000550020 SEC23AQ15436 765 aa10.3□□□□□ -0.76
TMEM116-209ENST00000550020 AXDND1Q5T1B0 1012 aaPredicted RBP10.3□□□□□ -0.76
TMEM116-209ENST00000550020 RESP18Q5W5W9 173 aa10.3□□□□□ -0.76
TMEM116-209ENST00000550020 OLFM4Q6UX06 510 aa10.3□□□□□ -0.76
TMEM116-209ENST00000550020 C15orf52Q6ZUT6 534 aaKnown RBP10.3□□□□□ -0.76
TMEM116-209ENST00000550020 SLF2Q8IX21 1173 aa10.3□□□□□ -0.76
TMEM116-209ENST00000550020 CCDC144CPQ8IYA2 1237 aa10.3□□□□□ -0.76
TMEM116-209ENST00000550020 DIS3L2Q8IYB7 885 aaKnown RBP10.3□□□□□ -0.76
TMEM116-209ENST00000550020 FAM177A1Q8N128 213 aaPredicted RBP10.3□□□□□ -0.76
TMEM116-209ENST00000550020 CTCFLQ8NI51 663 aaPredicted RBP10.3□□□□□ -0.76
TMEM116-209ENST00000550020 KIAA1524Q8TCG1 905 aa10.3□□□□□ -0.76
TMEM116-209ENST00000550020 NUP133Q8WUM0 1156 aa10.3□□□□□ -0.76
TMEM116-209ENST00000550020 CELF1Q92879 486 aaKnown RBP10.3□□□□□ -0.76
TMEM116-209ENST00000550020 NSUN4Q96CB9 384 aaKnown RBP10.3□□□□□ -0.76
TMEM116-209ENST00000550020 MAP7D2Q96T17 732 aa10.3□□□□□ -0.76
TMEM116-209ENST00000550020 PYM1Q9BRP8 204 aaKnown RBP10.3□□□□□ -0.76
TMEM116-209ENST00000550020 BCL2L12Q9HB09 334 aa10.3□□□□□ -0.76
TMEM116-209ENST00000550020 FAM217BQ9NTX9 383 aaPredicted RBP10.3□□□□□ -0.76
TMEM116-209ENST00000550020 R3HCC1Q9Y3T6 440 aaKnown RBP10.3□□□□□ -0.76
TMEM116-209ENST00000550020 SNAP23O00161 211 aa10.29□□□□□ -0.76
TMEM116-209ENST00000550020 DYNC1I1O14576 645 aa10.29□□□□□ -0.76
TMEM116-209ENST00000550020 CBFA2T2O43439 604 aa10.29□□□□□ -0.76
TMEM116-209ENST00000550020 PPFIA3O75145 1194 aa10.29□□□□□ -0.76
TMEM116-209ENST00000550020 RXRAP19793 462 aa10.29□□□□□ -0.76
TMEM116-209ENST00000550020 GNAQP50148 359 aa10.29□□□□□ -0.76
TMEM116-209ENST00000550020 MECOMQ03112 1051 aa10.29□□□□□ -0.76
TMEM116-209ENST00000550020 GRAPQ13588 217 aa10.29□□□□□ -0.76
TMEM116-209ENST00000550020 PTPAQ15257 358 aa10.29□□□□□ -0.76
TMEM116-209ENST00000550020 MEX3CQ5U5Q3 659 aaKnown RBP10.29□□□□□ -0.76
TMEM116-209ENST00000550020 TMC4Q7Z404 712 aa10.29□□□□□ -0.76
TMEM116-209ENST00000550020 CNBD1Q8NA66 436 aa10.29□□□□□ -0.76
TMEM116-209ENST00000550020 SPC24Q8NBT2 197 aa10.29□□□□□ -0.76
TMEM116-209ENST00000550020 GRAPLQ8TC17 118 aaPredicted RBP10.29□□□□□ -0.76
TMEM116-209ENST00000550020 ARHGEF1Q92888 912 aaKnown RBP10.29□□□□□ -0.76
TMEM116-209ENST00000550020 MAP3K14Q99558 947 aa10.29□□□□□ -0.76
TMEM116-209ENST00000550020 TTC12Q9H892 705 aaPredicted RBP10.29□□□□□ -0.76
TMEM116-209ENST00000550020 IQSEC3Q9UPP2 1182 aaPredicted RBP10.29□□□□□ -0.76
TMEM116-209ENST00000550020 HPSEQ9Y251 543 aa10.29□□□□□ -0.76
TMEM116-209ENST00000550020 DUOX1Q9NRD9 1551 aa10.29□□□□□ -0.76
TMEM116-209ENST00000550020 COL24A1Q17RW2 1714 aa10.29□□□□□ -0.76
TMEM116-209ENST00000550020 XDHP47989 1333 aa10.29□□□□□ -0.76
TMEM116-209ENST00000550020 THSD7AQ9UPZ6 1657 aa10.28□□□□□ -0.76
TMEM116-209ENST00000550020 LDHBP07195 334 aaKnown RBP10.28□□□□□ -0.76
TMEM116-209ENST00000550020 PLCG2P16885 1265 aa10.28□□□□□ -0.76
TMEM116-209ENST00000550020 KRT2P35908 639 aa10.28□□□□□ -0.76
TMEM116-209ENST00000550020 ST5P78524 1137 aa10.28□□□□□ -0.76
TMEM116-209ENST00000550020 CT47A1Q5JQC4 288 aaPredicted RBP10.28□□□□□ -0.76
TMEM116-209ENST00000550020 CTR9Q6PD62 1173 aa10.28□□□□□ -0.76
TMEM116-209ENST00000550020 C11orf57Q6ZUT1 292 aaPredicted RBP10.28□□□□□ -0.76
TMEM116-209ENST00000550020 C3orf67Q6ZVT6 689 aa10.28□□□□□ -0.76
TMEM116-209ENST00000550020 CCDC186Q7Z3E2 898 aa10.28□□□□□ -0.76
TMEM116-209ENST00000550020 NBPF11Q86T75 865 aa10.28□□□□□ -0.76
TMEM116-209ENST00000550020 TRIML1Q8N9V2 468 aa10.28□□□□□ -0.76
TMEM116-209ENST00000550020 SDR42E1Q8WUS8 393 aa10.28□□□□□ -0.76
TMEM116-209ENST00000550020 RPGRQ92834 1020 aaKnown RBP10.28□□□□□ -0.76
TMEM116-209ENST00000550020 FERMT2Q96AC1 680 aa10.28□□□□□ -0.76
TMEM116-209ENST00000550020 MYL10Q9BUA6 226 aa10.28□□□□□ -0.76
TMEM116-209ENST00000550020 ANKIB1Q9P2G1 1089 aa10.28□□□□□ -0.76
TMEM116-209ENST00000550020 TUBE1Q9UJT0 475 aa10.28□□□□□ -0.76
TMEM116-209ENST00000550020 KCNH3Q9ULD8 1083 aa10.28□□□□□ -0.76
TMEM116-209ENST00000550020 KAT6BQ8WYB5 2073 aa10.27□□□□□ -0.76
TMEM116-209ENST00000550020 MYH14Q7Z406 1995 aaKnown RBP10.27□□□□□ -0.77
TMEM116-209ENST00000550020 TRIM75PA6NK02 468 aa10.27□□□□□ -0.77
TMEM116-209ENST00000550020 USP17L12C9JPN9 530 aa10.27□□□□□ -0.77
TMEM116-209ENST00000550020 USP17L21D6R901 530 aa10.27□□□□□ -0.77
TMEM116-209ENST00000550020 AP5Z1O43299 807 aa10.27□□□□□ -0.77
TMEM116-209ENST00000550020 SMC2O95347 1197 aa10.27□□□□□ -0.77
TMEM116-209ENST00000550020 PTGS1P23219 599 aa10.27□□□□□ -0.77
TMEM116-209ENST00000550020 PTPREP23469 700 aa10.27□□□□□ -0.77
TMEM116-209ENST00000550020 ATP2B4P23634 1241 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms