RNA–Protein interactions for RNA: ENST00000549308.5

PTPRR-209, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-209ENST00000549308 ANGEL1Q9UNK9 670 aaKnown RBP14.21□□□□□ -0.13
PTPRR-209ENST00000549308 SMC3Q9UQE7 1217 aa14.21□□□□□ -0.13
PTPRR-209ENST00000549308 ROBO3Q96MS0 1386 aa14.21□□□□□ -0.13
PTPRR-209ENST00000549308 KLF18A0A0U1RQI7 1052 aa14.2□□□□□ -0.14
PTPRR-209ENST00000549308 PLCD1P51178 756 aa14.2□□□□□ -0.14
PTPRR-209ENST00000549308 DLGAP5Q15398 846 aa14.2□□□□□ -0.14
PTPRR-209ENST00000549308 NFXL1Q6ZNB6 911 aa14.2□□□□□ -0.14
PTPRR-209ENST00000549308 TTC6Q86TZ1 520 aa14.2□□□□□ -0.14
PTPRR-209ENST00000549308 ZNF274Q96GC6 653 aaPredicted RBP14.2□□□□□ -0.14
PTPRR-209ENST00000549308 ZKSCAN3Q9BRR0 538 aa14.2□□□□□ -0.14
PTPRR-209ENST00000549308 UBAC1Q9BSL1 405 aa14.2□□□□□ -0.14
PTPRR-209ENST00000549308 MTA3Q9BTC8 594 aa14.2□□□□□ -0.14
PTPRR-209ENST00000549308 OSBPL5Q9H0X9 879 aaPredicted RBP14.2□□□□□ -0.14
PTPRR-209ENST00000549308 TDRD3Q9H7E2 651 aaKnown RBP14.2□□□□□ -0.14
PTPRR-209ENST00000549308 MKNK2Q9HBH9 465 aa14.2□□□□□ -0.14
PTPRR-209ENST00000549308 PFKFB2O60825 505 aa14.19□□□□□ -0.14
PTPRR-209ENST00000549308 ST3GAL1Q11201 340 aa14.19□□□□□ -0.14
PTPRR-209ENST00000549308 WTAPQ15007 396 aa14.19□□□□□ -0.14
PTPRR-209ENST00000549308 IGDCC4Q8TDY8 1250 aa14.19□□□□□ -0.14
PTPRR-209ENST00000549308 GTF3C6Q969F1 213 aa14.19□□□□□ -0.14
PTPRR-209ENST00000549308 ZNF287Q9HBT7 754 aa14.19□□□□□ -0.14
PTPRR-209ENST00000549308 TMOD2Q9NZR1 351 aa14.19□□□□□ -0.14
PTPRR-209ENST00000549308 GJA3Q9Y6H8 435 aa14.19□□□□□ -0.14
PTPRR-209ENST00000549308 CCDC69A6NI79 296 aa14.19□□□□□ -0.14
PTPRR-209ENST00000549308 GOLGA8BA8MQT2 603 aa14.19□□□□□ -0.14
PTPRR-209ENST00000549308 FZD9O00144 591 aa14.19□□□□□ -0.14
PTPRR-209ENST00000549308 RPS12P25398 132 aaKnown RBP14.19□□□□□ -0.14
PTPRR-209ENST00000549308 PDIA3P30101 505 aaKnown RBP14.19□□□□□ -0.14
PTPRR-209ENST00000549308 CACNB3P54284 484 aa14.19□□□□□ -0.14
PTPRR-209ENST00000549308 CCT2P78371 535 aaKnown RBP14.19□□□□□ -0.14
PTPRR-209ENST00000549308 NFIAQ12857 509 aa14.19□□□□□ -0.14
PTPRR-209ENST00000549308 FAM47AQ5JRC9 791 aa14.19□□□□□ -0.14
PTPRR-209ENST00000549308 IQCA1Q86XH1 822 aa14.19□□□□□ -0.14
PTPRR-209ENST00000549308 PRMT6Q96LA8 375 aaPredicted RBP14.19□□□□□ -0.14
PTPRR-209ENST00000549308 IDI2Q9BXS1 227 aa14.19□□□□□ -0.14
PTPRR-209ENST00000549308 LY9Q9HBG7 655 aa14.19□□□□□ -0.14
PTPRR-209ENST00000549308 BRPF3Q9ULD4 1205 aa14.19□□□□□ -0.14
PTPRR-209ENST00000549308 TNKSO95271 1327 aa14.18□□□□□ -0.14
PTPRR-209ENST00000549308 SPDYE2BA6NHP3 402 aa14.18□□□□□ -0.14
PTPRR-209ENST00000549308 TSPY2A6NKD2 308 aa14.18□□□□□ -0.14
PTPRR-209ENST00000549308 HLA-DOAP06340 250 aa14.18□□□□□ -0.14
PTPRR-209ENST00000549308 SPDYE6P0CI01 402 aa14.18□□□□□ -0.14
PTPRR-209ENST00000549308 LMNB1P20700 586 aa14.18□□□□□ -0.14
PTPRR-209ENST00000549308 LIFRP42702 1097 aa14.18□□□□□ -0.14
PTPRR-209ENST00000549308 CDK8P49336 464 aa14.18□□□□□ -0.14
PTPRR-209ENST00000549308 NT5C2P49902 561 aa14.18□□□□□ -0.14
PTPRR-209ENST00000549308 EVCP57679 992 aa14.18□□□□□ -0.14
PTPRR-209ENST00000549308 SCRN1Q12765 414 aa14.18□□□□□ -0.14
PTPRR-209ENST00000549308 SYNE3Q6ZMZ3 975 aa14.18□□□□□ -0.14
PTPRR-209ENST00000549308 C16orf86Q6ZW13 317 aa14.18□□□□□ -0.14
PTPRR-209ENST00000549308 ZNF444Q8N0Y2 327 aaPredicted RBP14.18□□□□□ -0.14
PTPRR-209ENST00000549308 CHMP4CQ96CF2 233 aa14.18□□□□□ -0.14
PTPRR-209ENST00000549308 ZSCAN10Q96SZ4 725 aaPredicted RBP14.18□□□□□ -0.14
PTPRR-209ENST00000549308 GJB2P29033 226 aa14.17□□□□□ -0.14
PTPRR-209ENST00000549308 GMPSP49915 693 aaPredicted RBP14.17□□□□□ -0.14
PTPRR-209ENST00000549308 NUCB2P80303 420 aa14.17□□□□□ -0.14
PTPRR-209ENST00000549308 TCP10Q12799 353 aa14.17□□□□□ -0.14
PTPRR-209ENST00000549308 MTMR14Q8NCE2 650 aa14.17□□□□□ -0.14
PTPRR-209ENST00000549308 SLC44A5Q8NCS7 719 aa14.17□□□□□ -0.14
PTPRR-209ENST00000549308 SENP2Q9HC62 589 aa14.17□□□□□ -0.14
PTPRR-209ENST00000549308 FAM198AQ9UFP1 575 aa14.17□□□□□ -0.14
PTPRR-209ENST00000549308 ZNF541Q9H0D2 1346 aa14.16□□□□□ -0.14
PTPRR-209ENST00000549308 CLRN2A0PK11 232 aa14.16□□□□□ -0.14
PTPRR-209ENST00000549308 NPM3O75607 178 aaKnown RBP14.16□□□□□ -0.14
PTPRR-209ENST00000549308 MMP14P50281 582 aa14.16□□□□□ -0.14
PTPRR-209ENST00000549308 TFAP4Q01664 338 aa14.16□□□□□ -0.14
PTPRR-209ENST00000549308 SGMS1Q86VZ5 419 aa14.16□□□□□ -0.14
PTPRR-209ENST00000549308 RAB11FIP4Q86YS3 637 aa14.16□□□□□ -0.14
PTPRR-209ENST00000549308 ZSCAN29Q8IWY8 852 aaPredicted RBP14.16□□□□□ -0.14
PTPRR-209ENST00000549308 TMTC2Q8N394 836 aa14.16□□□□□ -0.14
PTPRR-209ENST00000549308 DHX36Q9H2U1 1008 aaKnown RBP14.16□□□□□ -0.14
PTPRR-209ENST00000549308 MYOZ2Q9NPC6 264 aa14.16□□□□□ -0.14
PTPRR-209ENST00000549308 ZNF70Q9UC06 446 aaPredicted RBP14.16□□□□□ -0.14
PTPRR-209ENST00000549308 SLC12A7Q9Y666 1083 aa14.16□□□□□ -0.14
PTPRR-209ENST00000549308 DICER1Q9UPY3 1922 aaKnown RBP14.16□□□□□ -0.14
PTPRR-209ENST00000549308 ZBTB43O43298 467 aa14.15□□□□□ -0.14
PTPRR-209ENST00000549308 ENTPD3O75355 529 aa14.15□□□□□ -0.14
PTPRR-209ENST00000549308 TSPY3P0CV98 308 aa14.15□□□□□ -0.14
PTPRR-209ENST00000549308 TSPY8P0CW00 308 aa14.15□□□□□ -0.14
PTPRR-209ENST00000549308 YBX3P16989 372 aaKnown RBP eCLIP14.15□□□□□ -0.14
PTPRR-209ENST00000549308 RASA1P20936 1047 aa14.15□□□□□ -0.14
PTPRR-209ENST00000549308 METAP2P50579 478 aaKnown RBP eCLIP14.15□□□□□ -0.14
PTPRR-209ENST00000549308 IFIT1BQ5T764 474 aaKnown RBP14.15□□□□□ -0.14
PTPRR-209ENST00000549308 APOA5Q6Q788 366 aa14.15□□□□□ -0.14
PTPRR-209ENST00000549308 ZFPM1Q8IX07 1006 aa14.15□□□□□ -0.14
PTPRR-209ENST00000549308 LLPHQ9BRT6 129 aaKnown RBP14.15□□□□□ -0.14
PTPRR-209ENST00000549308 NCOA5Q9HCD5 579 aaKnown RBP14.15□□□□□ -0.14
PTPRR-209ENST00000549308 SHTN1A0MZ66 631 aa14.15□□□□□ -0.14
PTPRR-209ENST00000549308 GOLGA8AA7E2F4 631 aa14.15□□□□□ -0.14
PTPRR-209ENST00000549308 TCP10L2B9ZVM9 353 aa14.15□□□□□ -0.14
PTPRR-209ENST00000549308 MYO1BO43795 1136 aa14.15□□□□□ -0.14
PTPRR-209ENST00000549308 DTNBO60941 627 aa14.15□□□□□ -0.14
PTPRR-209ENST00000549308 ZNF280AP59817 542 aaPredicted RBP14.15□□□□□ -0.14
PTPRR-209ENST00000549308 SEC23AQ15436 765 aa14.15□□□□□ -0.14
PTPRR-209ENST00000549308 SPDYE2Q495Y8 402 aa14.15□□□□□ -0.14
PTPRR-209ENST00000549308 CCDC178Q5BJE1 867 aa14.15□□□□□ -0.14
PTPRR-209ENST00000549308 ENAHQ8N8S7 591 aaPredicted RBP14.15□□□□□ -0.14
PTPRR-209ENST00000549308 DPF2Q92785 391 aa14.15□□□□□ -0.14
PTPRR-209ENST00000549308 TRIM34Q9BYJ4 488 aa14.15□□□□□ -0.14
PTPRR-209ENST00000549308 VEZTQ9HBM0 779 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms