RNA–Protein interactions for RNA: ENST00000548640.5

TMEM106C-209, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-209ENST00000548640 KRT40Q6A162 431 aa16.24■□□□□ 0.19
TMEM106C-209ENST00000548640 RBM43Q6ZSC3 357 aaKnown RBP16.24■□□□□ 0.19
TMEM106C-209ENST00000548640 FUCA2Q9BTY2 467 aa16.24■□□□□ 0.19
TMEM106C-209ENST00000548640 TMX4Q9H1E5 349 aaPredicted RBP16.24■□□□□ 0.19
TMEM106C-209ENST00000548640 DCP1AQ9NPI6 582 aaPredicted RBP16.24■□□□□ 0.19
TMEM106C-209ENST00000548640 CCDC39Q9UFE4 941 aa16.24■□□□□ 0.19
TMEM106C-209ENST00000548640 LAMB1P07942 1786 aa16.23■□□□□ 0.19
TMEM106C-209ENST00000548640 USP17L12C9JPN9 530 aa16.23■□□□□ 0.19
TMEM106C-209ENST00000548640 USP17L21D6R901 530 aa16.23■□□□□ 0.19
TMEM106C-209ENST00000548640 USP5P45974 858 aa16.23■□□□□ 0.19
TMEM106C-209ENST00000548640 PPP4CP60510 307 aa16.23■□□□□ 0.19
TMEM106C-209ENST00000548640 FAM160A1Q05DH4 1040 aa16.23■□□□□ 0.19
TMEM106C-209ENST00000548640 SEC23AQ15436 765 aa16.23■□□□□ 0.19
TMEM106C-209ENST00000548640 ADALQ6DHV7 355 aa16.23■□□□□ 0.19
TMEM106C-209ENST00000548640 CCDC144CPQ8IYA2 1237 aa16.23■□□□□ 0.19
TMEM106C-209ENST00000548640 FANCBQ8NB91 859 aa16.23■□□□□ 0.19
TMEM106C-209ENST00000548640 MRPS27Q92552 414 aaKnown RBP16.23■□□□□ 0.19
TMEM106C-209ENST00000548640 ZNF287Q9HBT7 754 aa16.23■□□□□ 0.19
TMEM106C-209ENST00000548640 INCENPQ9NQS7 918 aa16.23■□□□□ 0.19
TMEM106C-209ENST00000548640 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.23■□□□□ 0.19
TMEM106C-209ENST00000548640 TACC3Q9Y6A5 838 aa16.23■□□□□ 0.19
TMEM106C-209ENST00000548640 ESPNB1AK53 854 aa16.22■□□□□ 0.19
TMEM106C-209ENST00000548640 PPEF1O14829 653 aaPredicted RBP16.22■□□□□ 0.19
TMEM106C-209ENST00000548640 SPTLC2O15270 562 aa16.22■□□□□ 0.19
TMEM106C-209ENST00000548640 PPFIA3O75145 1194 aa16.22■□□□□ 0.19
TMEM106C-209ENST00000548640 IL1R1P14778 569 aa16.22■□□□□ 0.19
TMEM106C-209ENST00000548640 RXRAP19793 462 aa16.22■□□□□ 0.19
TMEM106C-209ENST00000548640 TYRO3Q06418 890 aa16.22■□□□□ 0.19
TMEM106C-209ENST00000548640 DDR1Q08345 913 aa16.22■□□□□ 0.19
TMEM106C-209ENST00000548640 ANO1Q5XXA6 986 aa16.22■□□□□ 0.19
TMEM106C-209ENST00000548640 OTUD7BQ6GQQ9 843 aa16.22■□□□□ 0.19
TMEM106C-209ENST00000548640 ILDR1Q86SU0 546 aaPredicted RBP16.22■□□□□ 0.19
TMEM106C-209ENST00000548640 TXNRD3Q86VQ6 643 aa16.22■□□□□ 0.19
TMEM106C-209ENST00000548640 SP8Q8IXZ3 490 aa16.22■□□□□ 0.19
TMEM106C-209ENST00000548640 FSIP1Q8NA03 581 aa16.22■□□□□ 0.19
TMEM106C-209ENST00000548640 LINC00301Q8NCQ3 95 aa16.22■□□□□ 0.19
TMEM106C-209ENST00000548640 ZNF384Q8TF68 577 aa16.22■□□□□ 0.19
TMEM106C-209ENST00000548640 NUP133Q8WUM0 1156 aa16.22■□□□□ 0.19
TMEM106C-209ENST00000548640 PHKBQ93100 1093 aa16.22■□□□□ 0.19
TMEM106C-209ENST00000548640 ZKSCAN3Q9BRR0 538 aa16.22■□□□□ 0.19
TMEM106C-209ENST00000548640 MYL10Q9BUA6 226 aa16.22■□□□□ 0.19
TMEM106C-209ENST00000548640 RNF26Q9BY78 433 aaPredicted RBP16.22■□□□□ 0.19
TMEM106C-209ENST00000548640 SENP2Q9HC62 589 aa16.22■□□□□ 0.19
TMEM106C-209ENST00000548640 CD209Q9NNX6 404 aa16.22■□□□□ 0.19
TMEM106C-209ENST00000548640 FAM217BQ9NTX9 383 aaPredicted RBP16.22■□□□□ 0.19
TMEM106C-209ENST00000548640 MROH7-TTC4A0A0A0MT08 1334 aa16.21■□□□□ 0.19
TMEM106C-209ENST00000548640 NR1I2O75469 434 aa16.21■□□□□ 0.19
TMEM106C-209ENST00000548640 CRACR2BQ8N4Y2 399 aaPredicted RBP16.21■□□□□ 0.19
TMEM106C-209ENST00000548640 FAM200AQ8TCP9 573 aa16.21■□□□□ 0.19
TMEM106C-209ENST00000548640 LRRC37AA6NMS7 1700 aa16.21■□□□□ 0.19
TMEM106C-209ENST00000548640 POLR3DP05423 398 aaPredicted RBP16.2■□□□□ 0.18
TMEM106C-209ENST00000548640 PTMAP06454 111 aaKnown RBP16.2■□□□□ 0.18
TMEM106C-209ENST00000548640 NPR1P16066 1061 aa16.2■□□□□ 0.18
TMEM106C-209ENST00000548640 U2AF2P26368 475 aaKnown RBP eCLIP16.2■□□□□ 0.18
TMEM106C-209ENST00000548640 PDE6BP35913 854 aa16.2■□□□□ 0.18
TMEM106C-209ENST00000548640 STK11IPQ8N1F8 1099 aa16.2■□□□□ 0.18
TMEM106C-209ENST00000548640 ENAHQ8N8S7 591 aaPredicted RBP16.2■□□□□ 0.18
TMEM106C-209ENST00000548640 CTCFLQ8NI51 663 aaPredicted RBP16.2■□□□□ 0.18
TMEM106C-209ENST00000548640 MCM9Q9NXL9 1143 aa16.2■□□□□ 0.18
TMEM106C-209ENST00000548640 ROBO3Q96MS0 1386 aa16.2■□□□□ 0.18
TMEM106C-209ENST00000548640 DLEC1Q9Y238 1755 aa16.19■□□□□ 0.18
TMEM106C-209ENST00000548640 C6orf229H3BNL8 230 aa16.19■□□□□ 0.18
TMEM106C-209ENST00000548640 PPP6R2O75170 966 aa16.19■□□□□ 0.18
TMEM106C-209ENST00000548640 APBA3O96018 575 aa16.19■□□□□ 0.18
TMEM106C-209ENST00000548640 MSNP26038 577 aaKnown RBP16.19■□□□□ 0.18
TMEM106C-209ENST00000548640 ALDH1B1P30837 517 aa16.19■□□□□ 0.18
TMEM106C-209ENST00000548640 SLC39A14Q15043 492 aa16.19■□□□□ 0.18
TMEM106C-209ENST00000548640 CAMK4Q16566 473 aa16.19■□□□□ 0.18
TMEM106C-209ENST00000548640 ZSCAN30Q86W11 494 aa16.19■□□□□ 0.18
TMEM106C-209ENST00000548640 NKX2-3Q8TAU0 364 aa16.19■□□□□ 0.18
TMEM106C-209ENST00000548640 TBC1D16Q8TBP0 767 aa16.19■□□□□ 0.18
TMEM106C-209ENST00000548640 AKT1S1Q96B36 256 aa16.19■□□□□ 0.18
TMEM106C-209ENST00000548640 FOXP1Q9H334 677 aaPredicted RBP16.19■□□□□ 0.18
TMEM106C-209ENST00000548640 BRMS1Q9HCU9 246 aa16.19■□□□□ 0.18
TMEM106C-209ENST00000548640 PCDHA7Q9UN72 937 aa16.19■□□□□ 0.18
TMEM106C-209ENST00000548640 CEP131Q9UPN4 1083 aa16.19■□□□□ 0.18
TMEM106C-209ENST00000548640 SUGT1Q9Y2Z0 365 aa16.19■□□□□ 0.18
TMEM106C-209ENST00000548640 PARP3Q9Y6F1 533 aa16.19■□□□□ 0.18
TMEM106C-209ENST00000548640 TSPY2A6NKD2 308 aa16.18■□□□□ 0.18
TMEM106C-209ENST00000548640 KIF28PB7ZC32 967 aa16.18■□□□□ 0.18
TMEM106C-209ENST00000548640 MMP1P03956 469 aa16.18■□□□□ 0.18
TMEM106C-209ENST00000548640 KIF5BP33176 963 aa16.18■□□□□ 0.18
TMEM106C-209ENST00000548640 ZRSR1Q15695 479 aaKnown RBP16.18■□□□□ 0.18
TMEM106C-209ENST00000548640 STX1AQ16623 288 aa16.18■□□□□ 0.18
TMEM106C-209ENST00000548640 C12orf60Q5U649 245 aa16.18■□□□□ 0.18
TMEM106C-209ENST00000548640 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.18■□□□□ 0.18
TMEM106C-209ENST00000548640 FTOQ9C0B1 505 aaKnown RBP eCLIP16.18■□□□□ 0.18
TMEM106C-209ENST00000548640 COA1Q9GZY4 146 aa16.18■□□□□ 0.18
TMEM106C-209ENST00000548640 ATP6V0A2Q9Y487 856 aa16.18■□□□□ 0.18
TMEM106C-209ENST00000548640 CLIC4Q9Y696 253 aa16.18■□□□□ 0.18
TMEM106C-209ENST00000548640 FAM205AQ6ZU69 1335 aa16.18■□□□□ 0.18
TMEM106C-209ENST00000548640 CYP2D7A0A087X1C5 515 aa16.17■□□□□ 0.18
TMEM106C-209ENST00000548640 PRPF3O43395 683 aaKnown RBP16.17■□□□□ 0.18
TMEM106C-209ENST00000548640 CLCN1P35523 988 aa16.17■□□□□ 0.18
TMEM106C-209ENST00000548640 NOSTRINQ8IVI9 506 aa16.17■□□□□ 0.18
TMEM106C-209ENST00000548640 CKAP2LQ8IYA6 745 aa16.17■□□□□ 0.18
TMEM106C-209ENST00000548640 AIFM3Q96NN9 605 aa16.17■□□□□ 0.18
TMEM106C-209ENST00000548640 MAP3K14Q99558 947 aa16.17■□□□□ 0.18
TMEM106C-209ENST00000548640 RTN4Q9NQC3 1192 aaKnown RBP16.17■□□□□ 0.18
TMEM106C-209ENST00000548640 MRVI1Q9Y6F6 885 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms