RNA–Protein interactions for RNA: ENST00000544907.6

TNFAIP1-202, Transcript of TNF alpha induced protein 1, humanhuman

TSL 2 BASIC

Gene TNFAIP1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-202ENST00000544907 RTN1Q16799 776 aa20.89■□□□□ 0.93
TNFAIP1-202ENST00000544907 TPTE2Q6XPS3 522 aa20.89■□□□□ 0.93
TNFAIP1-202ENST00000544907 C3orf67Q6ZVT6 689 aa20.89■□□□□ 0.93
TNFAIP1-202ENST00000544907 MRFAP1L1Q96HT8 127 aa20.89■□□□□ 0.93
TNFAIP1-202ENST00000544907 SENP2Q9HC62 589 aa20.89■□□□□ 0.93
TNFAIP1-202ENST00000544907 RAI14Q9P0K7 980 aa20.89■□□□□ 0.93
TNFAIP1-202ENST00000544907 KIAA1468Q9P260 1216 aa20.89■□□□□ 0.93
TNFAIP1-202ENST00000544907 CACNA1SQ13698 1873 aa20.89■□□□□ 0.93
TNFAIP1-202ENST00000544907 DEXIO95424 95 aa20.88■□□□□ 0.93
TNFAIP1-202ENST00000544907 GYG1P46976 350 aa20.88■□□□□ 0.93
TNFAIP1-202ENST00000544907 NDUFA8P51970 172 aa20.88■□□□□ 0.93
TNFAIP1-202ENST00000544907 NOLC1Q14978 699 aaKnown RBP eCLIP20.88■□□□□ 0.93
TNFAIP1-202ENST00000544907 SDF4Q9BRK5 362 aa20.88■□□□□ 0.93
TNFAIP1-202ENST00000544907 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.88■□□□□ 0.93
TNFAIP1-202ENST00000544907 FOXP1Q9H334 677 aaPredicted RBP20.88■□□□□ 0.93
TNFAIP1-202ENST00000544907 PSDA5PKW4 1024 aaPredicted RBP20.87■□□□□ 0.93
TNFAIP1-202ENST00000544907 PPFIA3O75145 1194 aa20.87■□□□□ 0.93
TNFAIP1-202ENST00000544907 ZPR1O75312 459 aa20.87■□□□□ 0.93
TNFAIP1-202ENST00000544907 RFC4P35249 363 aa20.87■□□□□ 0.93
TNFAIP1-202ENST00000544907 PTPAQ15257 358 aa20.87■□□□□ 0.93
TNFAIP1-202ENST00000544907 SAFBQ15424 915 aaKnown RBP eCLIP20.87■□□□□ 0.93
TNFAIP1-202ENST00000544907 RAB11FIP4Q86YS3 637 aa20.87■□□□□ 0.93
TNFAIP1-202ENST00000544907 KIAA1524Q8TCG1 905 aa20.87■□□□□ 0.93
TNFAIP1-202ENST00000544907 ARHGEF1Q92888 912 aaKnown RBP20.87■□□□□ 0.93
TNFAIP1-202ENST00000544907 MAP3K14Q99558 947 aa20.87■□□□□ 0.93
TNFAIP1-202ENST00000544907 UBAC1Q9BSL1 405 aa20.87■□□□□ 0.93
TNFAIP1-202ENST00000544907 TTC12Q9H892 705 aaPredicted RBP20.87■□□□□ 0.93
TNFAIP1-202ENST00000544907 HPSEQ9Y251 543 aa20.87■□□□□ 0.93
TNFAIP1-202ENST00000544907 GNL2Q13823 731 aaKnown RBP20.86■□□□□ 0.93
TNFAIP1-202ENST00000544907 SEC23AQ15436 765 aa20.86■□□□□ 0.93
TNFAIP1-202ENST00000544907 ADGRA1Q86SQ6 560 aa20.86■□□□□ 0.93
TNFAIP1-202ENST00000544907 COL23A1Q86Y22 540 aaPredicted RBP20.86■□□□□ 0.93
TNFAIP1-202ENST00000544907 MIGA1Q8NAN2 632 aa20.86■□□□□ 0.93
TNFAIP1-202ENST00000544907 CELF1Q92879 486 aaKnown RBP20.86■□□□□ 0.93
TNFAIP1-202ENST00000544907 PHKBQ93100 1093 aa20.86■□□□□ 0.93
TNFAIP1-202ENST00000544907 NOL10Q9BSC4 688 aaKnown RBP20.86■□□□□ 0.93
TNFAIP1-202ENST00000544907 TRIM5Q9C035 493 aa20.86■□□□□ 0.93
TNFAIP1-202ENST00000544907 ABCF2Q9UG63 623 aa20.86■□□□□ 0.93
TNFAIP1-202ENST00000544907 CASZ1Q86V15 1759 aa20.86■□□□□ 0.93
TNFAIP1-202ENST00000544907 A0A1B0GVL5 298 aa20.86■□□□□ 0.93
TNFAIP1-202ENST00000544907 MMP1P03956 469 aa20.86■□□□□ 0.93
TNFAIP1-202ENST00000544907 NBPF11Q86T75 865 aa20.86■□□□□ 0.93
TNFAIP1-202ENST00000544907 NBPF5PQ86XG9 351 aaPredicted RBP20.86■□□□□ 0.93
TNFAIP1-202ENST00000544907 CRACR2BQ8N4Y2 399 aaPredicted RBP20.86■□□□□ 0.93
TNFAIP1-202ENST00000544907 FANCBQ8NB91 859 aa20.86■□□□□ 0.93
TNFAIP1-202ENST00000544907 SLC26A6Q9BXS9 759 aa20.86■□□□□ 0.93
TNFAIP1-202ENST00000544907 RNF26Q9BY78 433 aaPredicted RBP20.86■□□□□ 0.93
TNFAIP1-202ENST00000544907 NEMFO60524 1076 aa20.85■□□□□ 0.93
TNFAIP1-202ENST00000544907 CUTAO60888 179 aa20.85■□□□□ 0.93
TNFAIP1-202ENST00000544907 ZNF202O95125 648 aa20.85■□□□□ 0.93
TNFAIP1-202ENST00000544907 CALM1P0DP23 149 aa20.85■□□□□ 0.93
TNFAIP1-202ENST00000544907 CALM2P0DP24 149 aa20.85■□□□□ 0.93
TNFAIP1-202ENST00000544907 CALM3P0DP25 149 aa20.85■□□□□ 0.93
TNFAIP1-202ENST00000544907 C11orf57Q6ZUT1 292 aaPredicted RBP20.85■□□□□ 0.93
TNFAIP1-202ENST00000544907 NOSTRINQ8IVI9 506 aa20.85■□□□□ 0.93
TNFAIP1-202ENST00000544907 ZNF654Q8IZM8 581 aa20.85■□□□□ 0.93
TNFAIP1-202ENST00000544907 INCENPQ9NQS7 918 aa20.85■□□□□ 0.93
TNFAIP1-202ENST00000544907 GJB4Q9NTQ9 266 aa20.85■□□□□ 0.93
TNFAIP1-202ENST00000544907 BECN2A8MW95 431 aa20.84■□□□□ 0.93
TNFAIP1-202ENST00000544907 RXRAP19793 462 aa20.84■□□□□ 0.93
TNFAIP1-202ENST00000544907 RILPL1Q5EBL4 403 aa20.84■□□□□ 0.93
TNFAIP1-202ENST00000544907 NSUN4Q96CB9 384 aaKnown RBP20.84■□□□□ 0.93
TNFAIP1-202ENST00000544907 PRIMPOLQ96LW4 560 aa20.84■□□□□ 0.93
TNFAIP1-202ENST00000544907 AIFM3Q96NN9 605 aa20.84■□□□□ 0.93
TNFAIP1-202ENST00000544907 KCNF1Q9H3M0 494 aa20.84■□□□□ 0.93
TNFAIP1-202ENST00000544907 RBM28Q9NW13 759 aaKnown RBP20.84■□□□□ 0.93
TNFAIP1-202ENST00000544907 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.84■□□□□ 0.93
TNFAIP1-202ENST00000544907 DUOX1Q9NRD9 1551 aa20.84■□□□□ 0.93
TNFAIP1-202ENST00000544907 ORC4O43929 436 aa20.83■□□□□ 0.93
TNFAIP1-202ENST00000544907 SLC3A2P08195 630 aaKnown RBP20.83■□□□□ 0.93
TNFAIP1-202ENST00000544907 PFKFB1P16118 471 aa20.83■□□□□ 0.93
TNFAIP1-202ENST00000544907 HIBADHP31937 336 aaKnown RBP20.83■□□□□ 0.93
TNFAIP1-202ENST00000544907 ZRSR1Q15695 479 aaKnown RBP20.83■□□□□ 0.93
TNFAIP1-202ENST00000544907 RESP18Q5W5W9 173 aa20.83■□□□□ 0.93
TNFAIP1-202ENST00000544907 DHX40Q8IX18 779 aaKnown RBP20.83■□□□□ 0.93
TNFAIP1-202ENST00000544907 ATP8A2Q9NTI2 1148 aa20.83■□□□□ 0.93
TNFAIP1-202ENST00000544907 MAST2Q6P0Q8 1798 aa20.83■□□□□ 0.92
TNFAIP1-202ENST00000544907 DHX8Q14562 1220 aaKnown RBP20.83■□□□□ 0.92
TNFAIP1-202ENST00000544907 SBK1Q52WX2 424 aa20.83■□□□□ 0.92
TNFAIP1-202ENST00000544907 RRP12Q5JTH9 1297 aaKnown RBP20.83■□□□□ 0.92
TNFAIP1-202ENST00000544907 ECM29Q5VYK3 1845 aa20.83■□□□□ 0.92
TNFAIP1-202ENST00000544907 WDHD1O75717 1129 aaPredicted RBP20.82■□□□□ 0.92
TNFAIP1-202ENST00000544907 XBP1P17861 261 aa20.82■□□□□ 0.92
TNFAIP1-202ENST00000544907 SPTY2D1Q68D10 685 aaPredicted RBP20.82■□□□□ 0.92
TNFAIP1-202ENST00000544907 IQCA1Q86XH1 822 aa20.82■□□□□ 0.92
TNFAIP1-202ENST00000544907 ZNF830Q96NB3 372 aaPredicted RBP20.82■□□□□ 0.92
TNFAIP1-202ENST00000544907 ZSCAN10Q96SZ4 725 aaPredicted RBP20.82■□□□□ 0.92
TNFAIP1-202ENST00000544907 MYL10Q9BUA6 226 aa20.82■□□□□ 0.92
TNFAIP1-202ENST00000544907 PDGFDQ9GZP0 370 aaPredicted RBP20.82■□□□□ 0.92
TNFAIP1-202ENST00000544907 TOMM22Q9NS69 142 aa20.82■□□□□ 0.92
TNFAIP1-202ENST00000544907 TUBE1Q9UJT0 475 aa20.82■□□□□ 0.92
TNFAIP1-202ENST00000544907 R3HCC1Q9Y3T6 440 aaKnown RBP20.82■□□□□ 0.92
TNFAIP1-202ENST00000544907 TNKSO95271 1327 aa20.82■□□□□ 0.92
TNFAIP1-202ENST00000544907 IRS2Q9Y4H2 1338 aa20.82■□□□□ 0.92
TNFAIP1-202ENST00000544907 DDAH1O94760 285 aa20.81■□□□□ 0.92
TNFAIP1-202ENST00000544907 TM4SF1P30408 202 aa20.81■□□□□ 0.92
TNFAIP1-202ENST00000544907 SYKP43405 635 aa20.81■□□□□ 0.92
TNFAIP1-202ENST00000544907 NLRP12P59046 1061 aa20.81■□□□□ 0.92
TNFAIP1-202ENST00000544907 CCDC144CPQ8IYA2 1237 aa20.81■□□□□ 0.92
TNFAIP1-202ENST00000544907 ZNF579Q8NAF0 562 aaKnown RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms