RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 RNF181Q9P0P0 153 aa8.24□□□□□ -1.09
CPSF7-222ENST00000544585 J3QL48 77 aa8.23□□□□□ -1.09
CPSF7-222ENST00000544585 PPM1GO15355 546 aaPredicted RBP8.23□□□□□ -1.09
CPSF7-222ENST00000544585 VEGFAP15692 232 aaPredicted RBP8.23□□□□□ -1.09
CPSF7-222ENST00000544585 IRS1P35568 1242 aa8.23□□□□□ -1.09
CPSF7-222ENST00000544585 MEIOBQ8N635 442 aa8.23□□□□□ -1.09
CPSF7-222ENST00000544585 INSM2Q96T92 566 aaPredicted RBP8.23□□□□□ -1.09
CPSF7-222ENST00000544585 SRCIN1Q9C0H9 1055 aa8.23□□□□□ -1.09
CPSF7-222ENST00000544585 ELP3Q9H9T3 547 aa8.23□□□□□ -1.09
CPSF7-222ENST00000544585 USP20Q9Y2K6 914 aa8.23□□□□□ -1.09
CPSF7-222ENST00000544585 PXDNLA1KZ92 1463 aa8.23□□□□□ -1.09
CPSF7-222ENST00000544585 WASHC2AQ641Q2 1341 aa8.23□□□□□ -1.09
CPSF7-222ENST00000544585 C4BP0C0L5 1744 aa8.23□□□□□ -1.09
CPSF7-222ENST00000544585 TONSLQ96HA7 1378 aa8.22□□□□□ -1.09
CPSF7-222ENST00000544585 C5P01031 1676 aa8.22□□□□□ -1.09
CPSF7-222ENST00000544585 UPP2O95045 317 aa8.22□□□□□ -1.09
CPSF7-222ENST00000544585 USP17L7P0C7H9 530 aa8.22□□□□□ -1.09
CPSF7-222ENST00000544585 EPB42P16452 691 aa8.22□□□□□ -1.09
CPSF7-222ENST00000544585 INPP5BP32019 993 aa8.22□□□□□ -1.09
CPSF7-222ENST00000544585 ST13P50502 369 aaKnown RBP8.22□□□□□ -1.09
CPSF7-222ENST00000544585 ARSJQ5FYB0 599 aaPredicted RBP8.22□□□□□ -1.09
CPSF7-222ENST00000544585 MEI1Q5TIA1 1274 aa8.22□□□□□ -1.09
CPSF7-222ENST00000544585 GIMAP6Q6P9H5 292 aa8.22□□□□□ -1.09
CPSF7-222ENST00000544585 BTLAQ7Z6A9 289 aa8.22□□□□□ -1.09
CPSF7-222ENST00000544585 CYP4X1Q8N118 509 aa8.22□□□□□ -1.09
CPSF7-222ENST00000544585 SRA1Q9HD15 236 aaKnown RBP8.22□□□□□ -1.09
CPSF7-222ENST00000544585 NPHS2Q9NP85 383 aa8.22□□□□□ -1.09
CPSF7-222ENST00000544585 PKD2L1Q9P0L9 805 aa8.22□□□□□ -1.09
CPSF7-222ENST00000544585 CNTNAP4Q9C0A0 1308 aa8.22□□□□□ -1.09
CPSF7-222ENST00000544585 GLTPD2A6NH11 291 aa8.21□□□□□ -1.1
CPSF7-222ENST00000544585 SPATA31C2B4DYI2 1134 aa8.21□□□□□ -1.1
CPSF7-222ENST00000544585 GADD45BO75293 160 aaPredicted RBP8.21□□□□□ -1.1
CPSF7-222ENST00000544585 PLEKHO1Q53GL0 409 aaPredicted RBP8.21□□□□□ -1.1
CPSF7-222ENST00000544585 SOGA3Q5TF21 947 aa8.21□□□□□ -1.1
CPSF7-222ENST00000544585 TAF1LQ8IZX4 1826 aa8.21□□□□□ -1.1
CPSF7-222ENST00000544585 C10orf71Q711Q0 1435 aa8.2□□□□□ -1.1
CPSF7-222ENST00000544585 HSPA1AP0DMV8 641 aaKnown RBP8.2□□□□□ -1.1
CPSF7-222ENST00000544585 HSPA1BP0DMV9 641 aaKnown RBP8.2□□□□□ -1.1
CPSF7-222ENST00000544585 NCLP19338 710 aaKnown RBP8.2□□□□□ -1.1
CPSF7-222ENST00000544585 LMNB1P20700 586 aa8.2□□□□□ -1.1
CPSF7-222ENST00000544585 TM4SF1P30408 202 aa8.2□□□□□ -1.1
CPSF7-222ENST00000544585 CABP4P57796 275 aa8.2□□□□□ -1.1
CPSF7-222ENST00000544585 TRIP4Q15650 581 aaPredicted RBP8.2□□□□□ -1.1
CPSF7-222ENST00000544585 AMOTQ4VCS5 1084 aa8.2□□□□□ -1.1
CPSF7-222ENST00000544585 NXPE4Q6UWF7 544 aa8.2□□□□□ -1.1
CPSF7-222ENST00000544585 LRRC69Q6ZNQ3 347 aa8.2□□□□□ -1.1
CPSF7-222ENST00000544585 BCO2Q9BYV7 579 aa8.2□□□□□ -1.1
CPSF7-222ENST00000544585 PPP4R2Q9NY27 417 aa8.2□□□□□ -1.1
CPSF7-222ENST00000544585 TMEM63CQ9P1W3 806 aa8.2□□□□□ -1.1
CPSF7-222ENST00000544585 KCNMB2Q9Y691 235 aa8.2□□□□□ -1.1
CPSF7-222ENST00000544585 CICQ96RK0 1608 aaPredicted RBP8.2□□□□□ -1.1
CPSF7-222ENST00000544585 UBR3Q6ZT12 1888 aa8.19□□□□□ -1.1
CPSF7-222ENST00000544585 SPINT1O43278 529 aa8.19□□□□□ -1.1
CPSF7-222ENST00000544585 POLR3DP05423 398 aaPredicted RBP8.19□□□□□ -1.1
CPSF7-222ENST00000544585 POU4F2Q12837 409 aa8.19□□□□□ -1.1
CPSF7-222ENST00000544585 CCDC144BQ3MJ40 725 aa8.19□□□□□ -1.1
CPSF7-222ENST00000544585 POTEGQ6S5H5 508 aa8.19□□□□□ -1.1
CPSF7-222ENST00000544585 TMA7Q9Y2S6 64 aaKnown RBP8.19□□□□□ -1.1
CPSF7-222ENST00000544585 GJA3Q9Y6H8 435 aa8.19□□□□□ -1.1
CPSF7-222ENST00000544585 V9GY48 417 aaPredicted RBP8.19□□□□□ -1.1
CPSF7-222ENST00000544585 RGPD2P0DJD1 1756 aa8.19□□□□□ -1.1
CPSF7-222ENST00000544585 STK10O94804 968 aaKnown RBP8.18□□□□□ -1.1
CPSF7-222ENST00000544585 ATP4AP20648 1035 aa8.18□□□□□ -1.1
CPSF7-222ENST00000544585 CHRNA5P30532 468 aa8.18□□□□□ -1.1
CPSF7-222ENST00000544585 CTSOP43234 321 aaPredicted RBP8.18□□□□□ -1.1
CPSF7-222ENST00000544585 CRKLP46109 303 aaKnown RBP8.18□□□□□ -1.1
CPSF7-222ENST00000544585 MTHFSP49914 203 aa8.18□□□□□ -1.1
CPSF7-222ENST00000544585 RBL2Q08999 1139 aa8.18□□□□□ -1.1
CPSF7-222ENST00000544585 WDR44Q5JSH3 913 aa8.18□□□□□ -1.1
CPSF7-222ENST00000544585 PRICKLE2Q7Z3G6 844 aa8.18□□□□□ -1.1
CPSF7-222ENST00000544585 GALNT12Q8IXK2 581 aa8.18□□□□□ -1.1
CPSF7-222ENST00000544585 TTLL6Q8N841 843 aa8.18□□□□□ -1.1
CPSF7-222ENST00000544585 PMEPA1Q969W9 287 aa8.18□□□□□ -1.1
CPSF7-222ENST00000544585 ZIC5Q96T25 663 aa8.18□□□□□ -1.1
CPSF7-222ENST00000544585 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.18□□□□□ -1.12e-7■■■■□ 22.5
CPSF7-222ENST00000544585 POLKQ9UBT6 870 aa8.18□□□□□ -1.1
CPSF7-222ENST00000544585 KCPQ6ZWJ8 1503 aa8.18□□□□□ -1.1
CPSF7-222ENST00000544585 POLRMTO00411 1230 aaKnown RBP8.17□□□□□ -1.1
CPSF7-222ENST00000544585 XYLBO75191 536 aa8.17□□□□□ -1.1
CPSF7-222ENST00000544585 GSTT1P30711 240 aa8.17□□□□□ -1.1
CPSF7-222ENST00000544585 GJA8P48165 433 aa8.17□□□□□ -1.1
CPSF7-222ENST00000544585 LINC00528Q8N1L1 170 aa8.17□□□□□ -1.1
CPSF7-222ENST00000544585 CEP63Q96MT8 703 aa8.17□□□□□ -1.1
CPSF7-222ENST00000544585 ABI2Q9NYB9 513 aaPredicted RBP8.17□□□□□ -1.1
CPSF7-222ENST00000544585 PDZRN3Q9UPQ7 1066 aa8.17□□□□□ -1.1
CPSF7-222ENST00000544585 USP42Q9H9J4 1324 aaKnown RBP8.17□□□□□ -1.1
CPSF7-222ENST00000544585 NCAPD2Q15021 1401 aa8.17□□□□□ -1.1
CPSF7-222ENST00000544585 WDR90Q96KV7 1748 aa8.17□□□□□ -1.1
CPSF7-222ENST00000544585 ITGB4P16144 1822 aa8.17□□□□□ -1.1
CPSF7-222ENST00000544585 A0A1B0GTH6 734 aa8.16□□□□□ -1.1
CPSF7-222ENST00000544585 H0YIN7 160 aa8.16□□□□□ -1.1
CPSF7-222ENST00000544585 EREGO14944 169 aa8.16□□□□□ -1.1
CPSF7-222ENST00000544585 MAP2P11137 1827 aaKnown RBP8.16□□□□□ -1.1
CPSF7-222ENST00000544585 DDR1Q08345 913 aa8.16□□□□□ -1.1
CPSF7-222ENST00000544585 PAK2Q13177 524 aa8.16□□□□□ -1.1
CPSF7-222ENST00000544585 EIF4A2Q14240 407 aaKnown RBP8.16□□□□□ -1.1
CPSF7-222ENST00000544585 C1orf141Q5JVX7 400 aa8.16□□□□□ -1.1
CPSF7-222ENST00000544585 TTC39BQ5VTQ0 682 aaPredicted RBP8.16□□□□□ -1.1
CPSF7-222ENST00000544585 ERMP1Q7Z2K6 904 aa8.16□□□□□ -1.1
CPSF7-222ENST00000544585 LYSMD3Q7Z3D4 306 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms