RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 FAM89AQ96GI7 184 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 TIGD1Q96MW7 591 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 ECM29Q5VYK3 1845 aa6.02□□□□□ -1.45
ATPAF1-212ENST00000542495 NID2Q14112 1375 aa6.02□□□□□ -1.45
ATPAF1-212ENST00000542495 A0A087WWV3 80 aa6.02□□□□□ -1.45
ATPAF1-212ENST00000542495 TCRBV5S4A2TA0A5A2 114 aa6.02□□□□□ -1.45
ATPAF1-212ENST00000542495 CCDC69A6NI79 296 aa6.02□□□□□ -1.45
ATPAF1-212ENST00000542495 FAM177BA6PVY3 158 aa6.02□□□□□ -1.45
ATPAF1-212ENST00000542495 PPFIA3O75145 1194 aa6.02□□□□□ -1.45
ATPAF1-212ENST00000542495 PPP6R2O75170 966 aa6.02□□□□□ -1.45
ATPAF1-212ENST00000542495 ZNF202O95125 648 aa6.02□□□□□ -1.45
ATPAF1-212ENST00000542495 ARID4AP29374 1257 aaPredicted RBP6.02□□□□□ -1.45
ATPAF1-212ENST00000542495 KCNJ6P48051 423 aa6.02□□□□□ -1.45
ATPAF1-212ENST00000542495 CTSWP56202 376 aa6.02□□□□□ -1.45
ATPAF1-212ENST00000542495 GSDMDP57764 484 aa6.02□□□□□ -1.45
ATPAF1-212ENST00000542495 NLRP12P59046 1061 aa6.02□□□□□ -1.45
ATPAF1-212ENST00000542495 NCAPHQ15003 741 aa6.02□□□□□ -1.45
ATPAF1-212ENST00000542495 TTF1Q15361 905 aaPredicted RBP6.02□□□□□ -1.45
ATPAF1-212ENST00000542495 TPD52L1Q16890 204 aaPredicted RBP6.02□□□□□ -1.45
ATPAF1-212ENST00000542495 DPCR1Q3MIW9 517 aa6.02□□□□□ -1.45
ATPAF1-212ENST00000542495 PI16Q6UXB8 463 aa6.02□□□□□ -1.45
ATPAF1-212ENST00000542495 RALYLQ86SE5 291 aaKnown RBP6.02□□□□□ -1.45
ATPAF1-212ENST00000542495 TBC1D10CQ8IV04 446 aa6.02□□□□□ -1.45
ATPAF1-212ENST00000542495 DNAJC10Q8IXB1 793 aa6.02□□□□□ -1.45
ATPAF1-212ENST00000542495 PDCL2Q8N4E4 241 aa6.02□□□□□ -1.45
ATPAF1-212ENST00000542495 NKX2-3Q8TAU0 364 aa6.02□□□□□ -1.45
ATPAF1-212ENST00000542495 PIGBQ92521 554 aa6.02□□□□□ -1.45
ATPAF1-212ENST00000542495 L3MBTL3Q96JM7 780 aaPredicted RBP6.02□□□□□ -1.45
ATPAF1-212ENST00000542495 C16orf45Q96MC5 204 aaPredicted RBP6.02□□□□□ -1.45
ATPAF1-212ENST00000542495 EPAS1Q99814 870 aa6.02□□□□□ -1.45
ATPAF1-212ENST00000542495 SDF4Q9BRK5 362 aa6.02□□□□□ -1.45
ATPAF1-212ENST00000542495 PIH1D3Q9NQM4 214 aaKnown RBP6.02□□□□□ -1.45
ATPAF1-212ENST00000542495 TMOD3Q9NYL9 352 aa6.02□□□□□ -1.45
ATPAF1-212ENST00000542495 TUBE1Q9UJT0 475 aa6.02□□□□□ -1.45
ATPAF1-212ENST00000542495 NAP1L2Q9ULW6 460 aaPredicted RBP6.02□□□□□ -1.45
ATPAF1-212ENST00000542495 ANGEL1Q9UNK9 670 aaKnown RBP6.02□□□□□ -1.45
ATPAF1-212ENST00000542495 HPSEQ9Y251 543 aa6.02□□□□□ -1.45
ATPAF1-212ENST00000542495 MYH3P11055 1940 aa6.02□□□□□ -1.45
ATPAF1-212ENST00000542495 ITGB4P16144 1822 aa6.02□□□□□ -1.45
ATPAF1-212ENST00000542495 TIAM2Q8IVF5 1701 aa6.02□□□□□ -1.45
ATPAF1-212ENST00000542495 USP27XA6NNY8 438 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 IKBKBO14920 756 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 WDHD1O75717 1129 aaPredicted RBP6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 PDE8BO95263 885 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 STARD3NLO95772 234 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 POLR3DP05423 398 aaPredicted RBP6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 SLC3A2P08195 630 aaKnown RBP6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 SKILP12757 684 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 PFKFB1P16118 471 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 FGFR2P21802 821 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 ITGA6P23229 1130 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 U2AF2P26368 475 aaKnown RBP eCLIP6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 DHX8Q14562 1220 aaKnown RBP6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 PTPAQ15257 358 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 SF3A1Q15459 793 aaKnown RBP6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 NTRK3Q16288 839 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 HLFQ16534 295 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 HSP90AB3PQ58FF7 597 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 TAF7LQ5H9L4 462 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 METTL24Q5JXM2 366 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 PPP4R3BQ5MIZ7 849 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 CEP135Q66GS9 1140 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 LDHAL6AQ6ZMR3 332 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 SYNE3Q6ZMZ3 975 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 CYB5R4Q7L1T6 521 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 SGMS1Q86VZ5 419 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 ELOA2Q8IYF1 753 aaPredicted RBP6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 CCAR2Q8N163 923 aaKnown RBP6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 IGDCC4Q8TDY8 1250 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 TMEM87BQ96K49 555 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 GJD4Q96KN9 370 aaPredicted RBP6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 MAP3K14Q99558 947 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 HSD3B7Q9H2F3 369 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 GREM2Q9H772 168 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 GJB4Q9NTQ9 266 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 ASAP1Q9ULH1 1129 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 DOCK2Q92608 1830 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 BCL9LQ86UU0 1499 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 DISP2A7MBM2 1401 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 MROH7-TTC4A0A0A0MT08 1334 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 STK36Q9NRP7 1315 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 ANKRD18BA2A2Z9 1011 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 CPLX1O14810 134 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 CDKL5O76039 1030 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 UQCRFS1P1P0C7P4 283 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 CYP19A1P11511 503 aaPredicted RBP6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 PDE6AP16499 860 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 CDC27P30260 824 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 LIFRP42702 1097 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 CLK2P49760 499 aaKnown RBP6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 SLC9C2Q5TAH2 1124 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 KRT40Q6A162 431 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 APOA5Q6Q788 366 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 SYNE4Q8N205 404 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 KCTD17Q8N5Z5 321 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 CCDC112Q8NEF3 446 aa6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 ERCC4Q92889 916 aaPredicted RBP6.01□□□□□ -1.45
ATPAF1-212ENST00000542495 STRBPQ96SI9 672 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms